Rissa tridactyla (black-legged kittiwake): 128902239
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Entry
128902239 CDS
T09443
Symbol
PHC1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128902239 (PHC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtd03036
]
128902239 (PHC1)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
128902239 (PHC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
zf-FCS
zf-CGNR
Motif
Other DBs
NCBI-GeneID:
128902239
NCBI-ProteinID:
XP_054040790
LinkDB
All DBs
Position
1:complement(142128784..142147634)
Genome browser
AA seq
995 aa
AA seq
DB search
METESEQNSSSTSGSSSSGGSTRPQISQMSLYERQAVQALQALQRQPNAAQYFHQFMLQQ
QLNSAQLHSLAAVQQATIAASRQASSPNTSTPQQTTTTQASINLATTSAAQLISRSQSVS
SPSATTLTQSVLLGNTTSPPLNQSQAQMYLRPQLGNLLQVNRTLGRNVPLASQLILMPNG
AVAAVQQEVPPTQSPGVHADTDQVQNLAVRSQQTSATNAPLQGSAQKAALPGSSQASGLP
QATSTGQTLVVAQASSGSAGQSLNLSQGAAGSNGVSGGVVASGGSQTSTGLSQTSSAGTT
GSCQRKGTGVVQPLPVAAAQAVTVSQGSQTETENAATKKGETDSSGQQTVGMNLTRTATP
APSQTLISSATYTQIQPHSLIQQQQQIHLQKQVVIQQQIAIHHQQQFQHRQSQLLHTATH
LQLAQQQQQQQAPSLTQPQQQAQPPQQQAPPQNQQQAQTLVVQPMLQSQPQPVQLQQDSP
CQSATKSPVPIQSKSLVTPIKPPQLGPAKMSATQQPPPHIPVQVVGTRQQGSGQAQALGL
AQIAAAVPTSRGMPAVVQPVSQAHAASPSPSSAPASSQEAPSLTTGVNLAQVQGTAHMVK
SAASSPVVAQMPAAFYMQSVQLPGKSQTLSVKRKAESEEEKEESPSVTALLPARSSPVTD
SPKNMEEKSGLGDKSDPAAIATPNTTSSEGASVTPTAAPTPNLAMVSRQMGDSKPPQAIV
KPQILTHIIEGFVIQEGAEPFPVGCSQLLKESEKPLQGEAPSGQSENLSSNSPGGDSASV
ELDKKANLLKCEYCGKYAPATQFRGSKRFCSMTCAKRYNVSCSHQFRLQRKKMKEFQEAN
YARVRRRGPRRSSSEIARTKIQGKRHRGQEDSSRGSDNSSYDEALSPTSPGPLSVRASHG
ERDLANSSMAPPTPDLHGINPVFLSSNPSRWSVEEVYEFIASLQGCQEIAEEFRSQEIDG
QALLLLKEEHLMSAMNIKLGPALKICAKINVLKET
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaaagtgagcagaactccagctccaccagcgggagctccagttctggagga
agcacgcgtcctcagatatcacagatgtctctctatgagcgacaggcagtacaggccctg
caggctctccagagacagcccaatgcagcccagtactttcatcagtttatgctccagcag
caacttaacagtgcccagcttcacagcctggctgctgtccagcaggctacaattgcagcc
agtagacaggccagctcccccaacaccagcacgccccaacagaccaccaccacccaggcc
tctatcaacctagccaccacatcagctgctcagctgatcagtcggtcacagagcgtgagt
tcccccagcgccacaaccctgacacagtctgtgctccttgggaataccacctcaccacct
ctcaaccagtcacaggcccagatgtatctccggccacagctggggaacctgttgcaggta
aaccggaccttgggccgcaatgtgcctcttgcctcccaactcatcctgatgcccaacggg
gctgtggccgctgtccagcaggaggtaccacccactcagtctcctggggtccatgcagac
acagaccaggtgcagaacttggctgtgaggagccagcagacctcagccacgaatgccccc
ctccaaggttctgctcagaaggcagctctaccaggaagctcccaggcttcgggcttacca
caggccaccagcacgggccagaccttggtggtggctcaggcctcctccggcagtgcaggc
cagtccctcaacttaagccagggggcagcaggcagcaatggtgtctctgggggtgtggtg
gcaagtggtgggagccagacctcaacgggattgagccagacctcctcagcaggcaccact
ggcagttgccaaaggaagggcacaggggtggttcagccattgccggtagcagctgcccag
gccgtgactgtcagccagggaagccagacggagacagagaatgcagccacgaaaaagggc
gaaacggacagcagtggacaacaaacggtgggcatgaacctgaccaggactgctacacca
gcacccagccagacattgatcagctcagccacatatacacagatccagccacactcgctg
atccagcagcagcagcagatccacctgcagaagcaggtggtgatccagcagcagatcgcc
attcatcaccagcagcagttccagcaccgccagtcccagctcctccacacagccacccat
ctccagctggcccaacagcagcaacagcagcaagcaccctctctgacccaaccgcagcag
caagctcagcctccgcagcagcaggctccacctcaaaaccagcagcaggctcagaccctt
gtggtgcaacctatgttgcagtcccagccacagcctgtgcagctccagcaggacagtcct
tgccagtcagccaccaagtcgcctgttccaattcagtcaaaatctctggttacccctatc
aaaccacctcagcttgggccggccaaaatgtcagcaacacagcagcctccaccacacatc
ccagtgcaggtggtgggtactcggcagcagggctcaggccaagcccaagcactgggtttg
gctcagattgctgcagcagtgccgacatcccggggaatgccagccgttgtccagcctgtt
tcccaagcccatgctgcttccccgtcaccgtcttcagctcctgcatcctcacaggaagct
ccttctctcaccacaggggtgaatttggcacaagttcaaggcacagcccatatggtgaag
agcgcagcctcctctccagttgtggctcagatgccagcagcattctacatgcagtctgtc
cagttgccaggcaagtctcagaccttatcagttaagcgcaaagcagagtcagaggaggag
aaggaggaatcacccagtgtcactgcacttctgcctgccaggtcctctcctgtgacagac
agccccaaaaacatggaggagaagagtggccttggagataaatctgatcctgctgccatt
gcaaccccaaataccacctcaagtgaaggagcatcagtcacccccactgctgctcccacc
ccaaacctggcaatggtgtcacgtcagatgggagactccaaaccgccacaagccatcgtc
aagccccagatcctcacacacatcattgagggctttgtcatccaggaaggagcagagccc
tttccggtgggttgttctcagctgctgaaagaatctgagaaaccgctgcagggagaggct
ccttctggccagagtgaaaacctgtccagcaattccccaggaggggacagtgcttctgtg
gagcttgataagaaagcaaacttgctgaagtgtgaatactgcggaaagtatgccccagca
acccagttccgtggctccaagaggttttgttccatgacctgtgctaaaaggtacaatgtc
agctgcagccatcagtttcggctacagagaaagaagatgaaggaattccaggaagctaac
tatgctcgtgtgcgccgacggggaccacgtcgcagcagctctgaaatcgctcgaacaaag
atccagggcaagcgccacaggggccaggaagactcaagtcgaggctctgataactccagc
tatgatgaagctttgtcccctacatctccaggacccctgtcagtaagggccagtcatgga
gagagggacctggcaaactctagtatggccccacctaccccagatctacatggcatcaac
ccagtcttcctgtccagcaatcccagtcgttggagtgtggaagaagtgtacgagttcatt
gcatcactgcaagggtgccaggagattgctgaggagtttcggtcacaggaaatcgatggc
caggccctgttgcttctgaaggaggaacacctcatgagtgccatgaacatcaagctggga
ccggctctcaagatctgtgccaagatcaatgtcctcaaggagacctaa
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