Rissa tridactyla (black-legged kittiwake): 128902260
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Entry
128902260 CDS
T09443
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128902260 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128902260 (C9orf72)
Membrane trafficking [BR:
rtd04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
128902260 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
128902260
NCBI-ProteinID:
XP_054040868
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All DBs
Position
Z:complement(14593587..14674614)
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AA seq
481 aa
AA seq
DB search
MSALCPPPSPAVAKTEISLNGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLAEKRVIIVSLIFDGNWNGDRSTYGLSIILPQSE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQEHFQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDISDTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPSERKCSRLCRNESSFKYESGLFVQGLLKDATGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRANSDEEMSQDRIIHTDESF
TPDLNVFQDILHRDTLVKAFLDQIFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRSLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDMLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctctttgtccaccaccatctcctgcagttgctaagacagagatctctctgaat
ggcgagtcacctttattagctgccacttttgcttactgggacaatattcttggcccccga
gtgcggcatatctgggccccaaagacagaacaggtgcttctcagtgacggtgaaataact
tttcttgctaaccacaccctgaatggagaaatacttcggaatgcagaaagcggtgcaata
gatgtgaagttcttcgtcttggcagaaaaaagggtaatcattgtgtcattgatctttgat
ggaaactggaatggagacagaagcacatatggactatcaattatacttccgcaaagtgaa
cttagcttctacctaccacttcacagggtgtgcgtggataggttaacacatattataagg
aaaggaagaatatggatgcataaggagaggcaagaacatttccagaagattgtcttggaa
ggcacggagagaatggaggatcagggccagagcatcattccaatgctgacaggagaagtc
attcctgtaatggaactcctttcatctatgaaatcacacagtgttccagaagaaatagat
ataagtgacacagtgctaaatgatgatgacattggggatagttgccatgaaggctttctc
ctcaatgcaattagttcacacctgcagacctgtggttgttctgtagttgtaggaagcagc
gcagaaaaagttaataagattgtgcgaacattgtgtctatttcttacaccatcagagcgg
aagtgttccagactctgtagaaatgagtcttctttcaaatatgagtcaggactttttgtt
caaggcttactcaaagatgcaacaggaagctttgtgttgcccttccgtcaagtaatgtat
gccccatatcctactacacatatagatgtagatgtcaatacagtgaagcagatgcctccc
tgtcatgaacacatctataaccaacgacgatatatgagatccgagctgacagcattttgg
agagctaattcagatgaagaaatgtctcaagatcgtattatccacacagatgagagtttc
acacctgatttaaatgtctttcaagatatcctgcatcgagatacattagtaaaagccttc
ctggatcagatctttcatctgaagcctggcttgtctctaaggagtactttccttgcacaa
tttctgctagtccttcacagaaaagccttaactttaataaaatacatagaggatgacacg
caaaaaggaaaaaaaccttttaagtctcttcgtagcttaaagatagatcttgacttaacg
gcagagggcgatcttaacataataatggctttggctgagaagattaaaccaggtctacat
tcctttatctttgggaggccattctacactagcgtacaagaacgtgatatgctcatgacg
ttttaa
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