Rissa tridactyla (black-legged kittiwake): 128903527
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Entry
128903527 CDS
T09443
Name
(RefSeq) LOW QUALITY PROTEIN: filamin-C-like
KO
K27393
filamin-C
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128903527
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtd04812
]
128903527
Cytoskeleton proteins [BR:
rtd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128903527
Intermediate filaments
Intermediate filament-binding proteins
128903527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
Y_Y_Y
Big_3_5
DUF5060
CFSR
PKD
Motif
Other DBs
NCBI-GeneID:
128903527
NCBI-ProteinID:
XP_054043511
LinkDB
All DBs
Position
Unknown
AA seq
1755 aa
AA seq
DB search
GPLSVAVTYGGDPIPQSPFAVSVAPPLQLGRVKVQGLSSTVAVGRPQEFRXGGGGAGGQG
RVGVSLTGPSGRPLPCALRPGPPGGPHRAAFTPPEEGPYRLEVTYDGHPLPGGPFCLEAT
LPPDPSKVCAYGPGLQGGRVGVPAPFTIDTKGAGTGGLGLTVEGPCEAKMECQDNGDGSC
SVSYLPAQPGDYAINILFAGAHIPGXPFKAAVLPVFDATKVTASGPGLEGARAGETAAFT
VDCSQAGDAELTIEIGAGDGGDGGKAEVLIRNNRDGTYAITYTPARPGSYTITVKYGGHP
VPKFPVRVTVDPAVDTGAVKVYGKGVEPRGVLREVGTDFTVDARSLTKTGGPHVKARVVN
PSGATTDTYVTDHGDGTYRVDYTPYEDGVHRVEVTYDDVAVPKSPFRVGVAEGCDPTRVR
AHGPGLEGGLVGKANRFTVETRGAGTGGLGLAIEGPSEAKMSCKDNKDGSCSVEYVPFTP
GDYDVNITFGGHPIPGSPFRVRVQEVVDPGKVKCSGPGLGPSVRARVPHSFTVDCSAAGL
APLEVTLLGPSGLPVPLEVRDNGDGTHKVTYTPAAEGPHTAAVRYAGQEVPRSPFKIKVL
PGHDASKVRASGPGLSAGAVPASLPVEFTIDAREAGEGLLTVQILDPEGRPTEAAIRDRG
DGTYGVSYVPALPGRYTSTVRYGGDEIPCSPFRCLAVPAGDASKCLVTVSIGGHGLGACL
GPTIQIGEETVITVDAKAAGQGKVTCKVSTPDGAELDVDVVENHDGTFDIFYTAPEPGKY
VITIRFGGEHVPNSPFHVLATDEPPATAENLRPFNLVIPFTVQKGEITGEVRMPSGKTAR
PNITDNKDGTVTVRYAPTEKGLHEMDIRYDGNHIPGSPLQFYVDAINPRHVSAYGPGLSH
GMVNKPCTFTIVTKDAGEGGLSLAVEGPSKAEITCQDNKDGTCTVSYLPTAPGDYNIIVR
FDDKHIPGSPFTAKITGDDSMRTSQLNVGTSTDVSLKITETDLSLLTASIRAPSGNEEPC
LLKRLPNRHIGISFTPKEVGEHVVSVRKSGQHVTNSPFKILVGQSEIGDASRVKVWGKGL
VEGHTFEVAEFIVDTRSAGYGGLGLSIEGPSKVDINCEDVEDGTCKVTYCPTEPGNYIIN
IKFADKHVPGSPFTVKVTGEGRMKESITRPRQAPSIATIGSTCDLNLKIPGNWFQMVSAQ
ERLTRSFTRSSHTYTRTERTEISKTRGGETTREVRVEESTQVGGDPFPNVFGGFLAREGL
GSFGSIARGQEGEAAAQELSAQVLSPSGQRFEAEVVAGGAGVYSVRFVPQEMGPHTVSVK
YRGQHVPGSPFQFTVGPLGEGGAHKVRAGGTGLQRGVAGVPAEFSIWTREAGAGGLSIAV
EGPSKAEIAFEERKDGACGVSYVVQEPGDYEVSIKFNEEHIPDSPFVVPVASPSDDARRL
TVTSLQETVTVNQPASFAVQLNGARGVIDAKVHTPGGVVEECYVSELDSDKYAIGFLPRE
NGVHSIDLRFNGRHVPGSPFNIRVGEQSQAGDPGLVTAYGPGLEGGLTGVCSEFLVKTAN
AGAGALAVTIDGPSKVKLDCVECAEGHRVTYTPMAPGNYLISIKXGGPHHIVGSPFKAKV
TGPRLSGGHSLHETSSVLVETVTRGGAAAARGPRFRGLPKFSSDAGKVVARGPGLATAFL
GQKNHFTVDCSKAGTNMLMVGVHGPKTPCEEVYVKHVGNRVYNVTYTVKEKGDYVLILRW
GGRTSPASPFRVTVP
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
ggccccctgtcggtggccgtcacctacgggggggacccgatcccccagagccccttcgcc
gtcagcgtggccccccccctgcagctcggcagggtgaaggtgcaggggctcagcagcacg
gtggcggtgggccgcccgcaggagttccggnntggaggcgggggcgcgggggggcagggc
cgcgtgggggtgtcgctgacgggcccctcgggccggcccctgccctgcgccctgcggccc
ggcccccccggcggcccccaccgcgccgccttcaccccccccgaggaggggccctaccgc
ctggaggtcacctacgacgggcacccgctgccgggggggcccttctgcctggaggccacg
ctgccccccgaccccagcaaggtgtgtgcctacgggccgggcctgcaggggggccgcgtg
ggggtgccggcgcccttcaccatcgacaccaagggggcgggcacgggggggctggggctg
acggtggagggtccctgcgaggccaagatggagtgtcaggacaacggcgacggctcctgc
tccgtctcctacctgccggcccagcccggcgactacgccatcaacatcctcttcgccggc
gcccacatccccggcntccccttcaaggccgccgtcctccccgtcttcgacgccaccaag
gtgacggccagcggccccggcttggaaggagccagggccggcgaaacggccgccttcacg
gtggactgtagccaagcgggcgacgccgagctgaccatcgagatcggggcgggcgacggc
ggcgacggcggcaaagccgaggtgctcatccgcaacaaccgcgacggcacctacgccatc
acctacaccccggcccgccccggctcctacaccatcaccgtcaagtacggcggccacccc
gtccccaagttccccgtccgcgtcaccgtcgacccggccgtggacaccggcgccgtcaag
gtctacgggaagggagtggagcccagaggggtgctgcgggaggtgggcaccgacttcacg
gtggacgcccggagcctcaccaagacgggggggccccacgtcaaggcccgggtggtcaat
ccctcgggggccaccaccgacacctacgtcaccgaccacggcgacggcacctaccgcgtg
gactacaccccctacgaggacggcgtgcaccgggtggaggtgacctacgacgacgtggcg
gtccccaagagccccttccgcgtgggggtggcggagggctgtgaccccacccgcgtgcgg
gcgcacgggcccggcctggagggcggcctggtgggcaaggccaaccgcttcaccgtggag
accaggggggctggcaccggggggctgggcctggccatcgaggggccctcggaggccaag
atgtcctgcaaggacaacaaggacgggagctgctcggtggagtacgtccccttcacgccc
ggcgactacgacgtcaacatcaccttcgggggccaccccatccccgggagccccttccgg
gtgcgggtgcaggaggtggtggaccccgggaaggtgaaatgttcggggccggggctgggc
cccagcgtgagggcgcgggtgccccacagcttcacggtggactgcagcgccgcggggctg
gccccactggaggtcacgctgctgggaccctcggggctgccggtgccgctggaggtgcgg
gacaacggggacggcacccacaaggtcacctacaccccggccgccgaggggccgcacacg
gccgccgtgcgctacgccggccaggaggtgccgcgcagccccttcaagatcaaggtgctg
ccgggccacgacgccagcaaggtgcgagccagcggccccgggctgagcgcgggcgccgtc
cccgccagcctccccgtggagttcaccatcgacgcccgcgaggccggcgaggggctgctc
accgtccagatcctggaccccgagggccgccccacggaagccgccatccgggaccgtggg
gacgggacctacggcgtgtcctacgtgccggcgctgcccgggcgctacaccagcaccgtg
cgctacggcggcgacgagatcccctgctcgcccttccgctgcctcgccgtgcccgccggc
gacgccagcaagtgcctcgtcacagtgtccatcgggggccatggactgggtgcctgtctg
ggccccaccatccagatcggggaggagacggtgatcacggtggacgccaaggcggccggg
cagggcaaggtcacctgcaaggtgtccacccccgacggggccgagctggacgtggacgtg
gtggagaaccacgacggcaccttcgacatcttctacaccgcccccgagcccggcaaatac
gtcatcaccatccgcttcgggggcgagcacgtccccaacagccccttccacgtcctggcc
acggatgagcccccggccaccgctgagaaccttcggcccttcaacctggtcatccccttc
accgtgcagaagggcgagatcacaggggaggtgcggatgccctcggggaagacggcgcgg
cccaacatcaccgacaacaaggacgggacggtgacggtgcgttacgcccccaccgagaag
gggctgcacgagatggacatccgctacgacggcaaccacatccccgggagtcccctccag
ttctacgtggacgccatcaacccccggcacgtcagcgcctacgggccggggctgagccac
ggcatggtcaacaagccgtgcaccttcaccatcgtcaccaaggacgccggggagggtggg
ctctccttggcggtggagggcccttccaaggcggagatcacctgccaggacaacaaggac
gggacctgcaccgtgtcctacctgcccaccgcccccggggactacaacatcatcgtccgc
ttcgatgacaagcacatcccgggcagccccttcactgccaagatcaccggggacgactcc
atgcggacgtcccagctcaacgtgggcacctcgacggacgtctcgctgaagatcacggag
acggacctgagcctgctgacggccagcatccgggcgccctcgggcaacgaggagccctgt
ctgctcaagcgcttgcccaaccgccacatcggcatctccttcacgcccaaggaggtgggc
gagcacgtggtgagcgtgaggaagagcgggcagcacgtcaccaacagccccttcaagatc
ctggtggggcagtcggagatcggggacgccagccgggtgaaggtgtggggcaaggggctg
gtggaaggtcacaccttcgaggtggccgagttcatcgtggacacccgcagcgccggctac
ggggggctgggcctgtccatcgagggtcccagcaaggtggacatcaactgcgaggacgtg
gaggacggcacctgcaaggtcacctactgccccaccgagcccggcaactacatcatcaac
atcaagttcgccgacaaacacgtcccagggagccccttcacggtgaaggtgacgggcgag
gggcgcatgaaggagagcatcacgcgcccgcgccaggccccctccatcgccaccatcggc
agcacctgcgacctcaacctcaagatcccagggaactggttccagatggtgtcggcgcag
gagcggctgacgcgcagcttcacgcggagcagccacacgtacacgcgcacggagcgcacg
gagatcagcaagacgcggggcggggagaccacgcgggaggtgcgggtggaggagtccacc
caggtcggcggcgaccccttccccaacgtcttcgggggcttcctggcccgcgaggggctg
ggctccttcggctccatcgcccgcggccaggagggcgaggcggcggcgcaggagctgtcg
gcgcaggtgctgagcccctcggggcagcgcttcgaggcggaggtggtggcggggggcgcg
ggggtgtacagcgtgcgcttcgtgccccaggagatgggcccccacaccgtcagcgtcaag
taccgggggcagcacgtgcccggcagccccttccagttcaccgtggggcccttgggcgaa
gggggggcccacaaggtgcgggcggggggcaccggcctccagcgcggcgtggccggggtg
ccagcggagttcagcatctggacgcgggaggcgggggcgggggggctctccatcgccgtg
gaggggcccagcaaggccgagatcgccttcgaggagcgcaaggacggggcctgcggcgtc
tcctacgtcgtccaggagcccggtgactacgaggtgtccatcaagttcaacgaggagcac
atccccgacagccccttcgtggtgcccgtcgcctccccctccgatgacgcccgccgcctg
actgtcaccagcctccaggagacggtgacagtgaaccagccggcgtccttcgccgtgcag
ctcaacggggcgcgcggcgtcatcgacgccaaggtgcacacgccgggcggcgtggtggag
gagtgctacgtctccgagctcgacagcgacaagtacgccatcgggttcctgccgcgggag
aacggggtgcactccatcgacctgcgcttcaacggccgccacgtccccggcagccccttc
aacatccgcgtgggcgagcagagccaggccggggaccccgggctcgtcaccgcctacggg
cccggcctcgagggggggctcacaggcgtgtgctccgagttcctggtgaagacggccaac
gcgggggcgggggcgctggccgtcaccatcgacggcccctccaaggtgaagctggactgc
gtggagtgcgccgagggccaccgcgtcacctacacccccatggcccccggcaactacctc
atctccatcaagtagggcggcccccaccacatcgtcggcagccccttcaaggccaaggtc
accggcccccgcctgtcggggggacacagcctgcacgagacgtcgtcggtgctggtggag
acggtgacgcgggggggggcggcggcggcgcggggcccccgctttcgggggctccccaag
ttctcctcggacgcggggaaggtggtggcccggggaccgggactggccaccgccttcctg
ggccagaagaaccacttcaccgtcgactgcagcaaggccggcaccaacatgctgatggtg
ggggtgcacggccccaagaccccctgcgaggaggtttacgtcaagcacgtgggcaaccgg
gtctacaacgtcacctacacggtgaaggagaagggggactacgtcctcatcctgcgctgg
gggggacgaacgtccccggcaagccccttccgcgtcaccgtcccctga
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