Rissa tridactyla (black-legged kittiwake): 128903858
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Entry
128903858 CDS
T09443
Name
(RefSeq) LOW QUALITY PROTEIN: cystathionine beta-synthase-like
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00260
Glycine, serine and threonine metabolism
rtd00270
Cysteine and methionine metabolism
rtd00670
One carbon pool by folate
rtd01100
Metabolic pathways
rtd01230
Biosynthesis of amino acids
Module
rtd_M00035
Methionine degradation
rtd_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
128903858
00270 Cysteine and methionine metabolism
128903858
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128903858
Enzymes [BR:
rtd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
128903858
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Gene cluster
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Motif
Pfam:
PALP
CBS
Poxvirus_B22R_C
Motif
Other DBs
NCBI-GeneID:
128903858
NCBI-ProteinID:
XP_054043732
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Position
1:99121243..99146865
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AA seq
594 aa
AA seq
DB search
MARITVWCISVFQGQPNTQRVNRSPILLASEKSTALTSGSPAELLQRTCHQGRERSKRXR
RRMAEMELTKTCLLMNGSCVGSQESQADCTWVLPNLPSKCTWTAATPATKSPHSCMPLPE
ETKILPNILKKIGCTPMVRVNKIGKSYGLKCELLAKCEYFNAGGSVKDRISLRMVEDAER
AGIIKPGDTLIEPTSGNTGIGLALVAAVKGYRCIIVLPEKMSMEKVDILKALGVEIVRTP
CTRFDAPESNIRVAWKLKSEIPNSHILDQYRNPSNPLAHYDTTAEEILEQCEGKVHMVVI
GSGTGGTVTGVARKLKEKCPECKIIGVDPEGSIVALPSEMNRTNTTTIEVEGIGHDFIPT
VLDRSVVDQWYKCNDRDSFLMSRRLIREEGLLCGGSSGSAMSVAVRAAKDLKEGQRCVVI
LPDSVRNYMSKFLNDKWMIKHGFLNDVQEHKPWWWNIKVQKLNLSAPLILLPEVSCQKAI
EILQEKGYDQAPVVAESGLILGMVTLSNTLTSVLAGNAQFSDPVTKVIYDQFSKIGLEDS
LGKLSCILENDHFAIVVHEQMQFNGNGSSFMKQMVFGVVTAMDLLTFVSRSDKK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggctaggataacggtgtggtgtatctctgtgtttcaggggcagcccaacacgcagaga
gtgaaccgcagccccatcctcctggccagtgagaaaagcacggcgctgacttcaggtagt
cctgctgagctgcttcaaagaacctgccaccaagggcgtgaaaggagcaagcgangaaga
aggaggatggcagaaatggagctgaccaagacgtgcctgctcatgaatggcagttgcgtg
ggaagtcaggaaagccaagctgactgcacgtgggttcttcccaacttgcccagtaagtgc
acctggacagctgcaacgccggccaccaagtctccacactcctgtatgcccttgccagaa
gaaacaaagatcttgcccaacatcctgaagaaaattggctgcaccccaatggtccgagtc
aacaagatcgggaagtcctatgggcttaagtgtgagctcttggcaaaatgtgagtacttc
aacgcagggggcagtgtgaaggaccgcatcagcctgcggatggtggaagatgcagagaga
gctgggattataaaaccaggagacacactgattgaacccacttcaggaaacacaggaatc
gggctggcactggtagctgcagtgaaaggttaccgctgcatcattgtcttgccggagaaa
atgagcatggagaaggtcgatatcctgaaggcgctgggtgttgaaattgtgaggaccccg
tgcacccgctttgatgccccggagtctaacatccgtgttgcctggaagctgaaaagtgaa
atcccaaactctcatatcctggaccagtaccgaaatccaagcaaccctctggctcattat
gacaccacagcggaggagatcctggagcagtgcgaaggcaaggtccacatggtggtgatt
gggtctggcaccggaggcactgtcactggcgtcgccaggaagctgaaggagaagtgccca
gagtgcaagatcattggtgtagatcccgaaggctccatcgttgctttgcccagtgagatg
aacaggacaaacaccacaactattgaagtagagggcattgggcatgactttatccctact
gtccttgacagatcagtggttgatcagtggtataaatgcaacgacagagactcgttcctc
atgtctcgcaggctgattagagaggagggattattgtgcggtggcagctctggcagtgcc
atgtccgtcgctgtgcgggctgccaaggacctgaaggaaggccagcgctgtgttgtcatc
ctgcccgattccgtcaggaactacatgtccaaatttttgaatgataagtggatgataaaa
cacggtttcctaaatgacgtccaggagcacaagccttggtggtggaacatcaaggtgcag
aaactgaatctctcagcccctctcattctcctcccagaagtcagctgtcagaaggcaatt
gagatcctccaggagaagggatatgaccaagctcctgttgttgctgaatcaggacttatt
ttgggaatggtgaccctcagcaacaccctcacctcagtgctggctggaaacgcacagttc
tcggaccctgttacaaaggtcatctacgaccagttctcaaagattggcctggaggacagc
ctcgggaagctttcctgcatcctggagaacgaccattttgctatcgttgtacacgagcaa
atgcagttcaatggaaatggcagctccttcatgaagcagatggtgtttggtgtggtcaca
gcaatggacctcctcaccttcgtcagcaggagcgacaagaagtag
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