Rissa tridactyla (black-legged kittiwake): 128903880
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Entry
128903880 CDS
T09443
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128903880 (TRPC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtd04040
]
128903880 (TRPC6)
Ion channels [BR:
rtd04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128903880 (TRPC6)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Cas8b_C
Motif
Other DBs
NCBI-GeneID:
128903880
NCBI-ProteinID:
XP_054043749
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Position
1:complement(17308189..17412987)
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AA seq
895 aa
AA seq
DB search
MSQAQPYAPRKSSSPAAGARRNDSQDYLLLDAEPCEESALPPYAFYPVRGNENRLALRRQ
TILREKGRRQASRGPAYMFNDHSTSLSLEEERFLDAAEYGNIPVIRKMLEECPSLNVNCV
DYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAILNHPAFAEG
KRLALSPSQSELQHDDFYAYDEDGTRFSHDVTPIILAAHCHEYEIVHTLLRKGARIDRPH
DYFCKCSECNQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELAVLAN
IEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDVEMSHNNGERGRPSLSRLKL
AIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAVGLPFLSMAYWIAP
CSKLGRIMRGPFMKFVAHAASFTIFLGLLVMNAADRFDGTKLRPNETTGNVKQLFRMKTS
CFSWMEMLIISWVIGMIWSECKEIWSQGPKEYLFELWNMLDFGMLAIFAASFIARFMAFW
HASRAQNFVDANMKDLTSPTLEPNIKYYTLARINWDPSDPQIISEGLYAIAVVLSFSRIA
YILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYLGAKQNEAFTTV
EESFKTLFWAIFGLSEVKSVVINYKHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSSF
QEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLLYLLLRIKKCISKPFLCQ
KKSFQEDAEMNKLGQRKQSSIRSSDEIHLNSLNNPPRQYQKIMKRLIKRYVLKAQIDKES
DEVNEGELKEIKQDISSLRYELLEEKSQNSEDLAELIRKLGEKLSIDCKEEESKR
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggcgcagccctacgccccgcggaagagcagctccccggcggccggcgcccgg
cggaacgacagccaggactacctgctgctggacgcggagccctgcgaggagagcgccctg
ccgccctacgccttctaccccgtccgaggtaacgagaatagactagcgctacgacgacag
accattctccgggagaaggggaggaggcaggccagtcgagggccagcgtatatgtttaat
gaccactccacaagtctttctcttgaggaggagcgctttttggatgcagcagaatatgga
aatattccagttattcgcaaaatgctggaagaatgtccctcactcaatgtgaactgtgtg
gactatatggggcagaacgccttgcagctggcagttgccaatgagcacctggagatcaca
gaacttctgctaaagaaggagaacctgtctcgggttggggatgccttgcttttggctatt
agcaaaggttacgttcggatagtggaagccatcctaaaccatcctgcatttgccgaaggc
aagaggcttgccttgagtcctagccagtcggagctccagcatgatgatttctatgcatac
gatgaagatggcacacggttttcccatgatgtcacaccaatcattctggccgctcactgc
catgaatatgagattgtccacactctgctgagaaaaggagctcggatcgataggccacat
gactatttctgcaagtgcagtgaatgcaatcagaaacaaaagcatgactctttcagccat
tctaggtctagaatcaatgcctacaaaggtctggccagccctgcttatctgtctttgtcc
agtgaagaccctgtaatgactgccttagagctcagcaatgagttggctgtgcttgccaac
attgaaaaagagtttaagaacgattacaagaaattgtctatgcaatgcaaggattttgta
gtgggactccttgatttgtgcagaaatacagaagaagtggaagctattctgaatggtgat
gtagagatgagccataataatggagaacgtggtcgccccagccttagccgcttaaaactc
gccattaagtatgaagttaaaaaatttgtagcacatccaaactgccagcagcaacttctc
tcaatctggtacgagaatttgtcaggtttacggcagcagaccatggcagtgaagtttctg
gttgttcttgctgttgcagtagggctgccattcctttcgatggcttactggattgctcct
tgcagtaagctggggaggataatgcgtggaccatttatgaagtttgtagcccatgcagcc
tctttcaccatttttcttggtctgcttgtcatgaacgccgctgacagatttgatggcacc
aaactccgacctaatgaaacaacaggcaacgtgaaacagctatttaggatgaaaacatcc
tgtttctcatggatggagatgctcattatttcttgggtaataggcatgatatggtcggaa
tgtaaagaaatttggtctcaaggtccaaaggaatacctttttgagttatggaacatgctt
gattttggtatgttggcaatttttgcagcatctttcatagcaaggtttatggcattttgg
catgcgtccagagcccagaacttcgttgatgcaaatatgaaagatctgacaagtccaaca
ctggagcccaacataaaatactacaccttggccagaataaactgggatccatctgatcct
cagatcatatctgaaggcctgtatgcaattgcggtagtattaagtttctccagaatagcc
tacatcttaccagctaatgaaagctttggaccactccagatatcacttggcagaacggtg
aaagacatcttcaagttcatggtgatatttatcatggtgtttgtggctttcatgataggc
atgtttaatctctattcctactatctgggggcaaaacaaaatgaagcattcacaactgtt
gaagaaagtttcaagacgttgttctgggctatatttggactctcagaagttaaatcagtt
gtcatcaattataaacataaatttattgaaaatattggttatgtcctttatggagtctat
aatgttaccatggtcattgtcttactgaacatgctcattgcaatgatcaacagttcattc
caggaaattgaggatgatgctgatgtagagtggaaatttgcaagggctaaactttggttt
tcttactttgaagaagggagaactcttccagtacccttcaatttagtgccaagcccaaaa
tctttgctgtatctcctactcagaatcaaaaaatgtatttctaaaccatttctgtgccaa
aagaaaagctttcaggaagatgcagagatgaacaagcttggtcaaaggaagcaatcaagt
ataagaagctcagatgaaatccatttaaacagtttaaacaatcctccaaggcaataccag
aaaataatgaagcgtctcattaaaagatatgtactgaaagctcagatagataaggaaagt
gatgaagtcaatgaaggtgaactgaaggaaattaaacaggatatctcaagtctccggtat
gaactccttgaggaaaaatctcagaattctgaagatctggcagaacttataaggaaactt
ggggaaaaactgtcaattgactgtaaagaagaagaaagcaagagataa
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