Rissa tridactyla (black-legged kittiwake): 128904149
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Entry
128904149 CDS
T09443
Symbol
TIAM1
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04530
Tight junction
rtd04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128904149 (TIAM1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128904149 (TIAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtd04990
]
128904149 (TIAM1)
Domain-containing proteins not elsewhere classified [BR:
rtd04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
128904149 (TIAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tiam_CC_Ex
RhoGEF
PH
RBD
PH_9
PDZ
PDZ_2
PDZ_6
RNA_pol_Rpc82
PH_11
PH_6
Motif
Other DBs
NCBI-GeneID:
128904149
NCBI-ProteinID:
XP_054044061
LinkDB
All DBs
Position
1:104674794..104892671
Genome browser
AA seq
1599 aa
AA seq
DB search
MGNAESQSVEHAFYGDKHTSLGRKHTSRSLRLSNKASRRTRHASSGKIIHRNSEVSTRSS
STPSIPQSLAENGLEPFAQEANLEDFGSPIWVDRMDMGLRPVSYHTDSSVTPSVDSSTVL
TAASVQSMPDSEESRLYGDEPPFLAEGDGRSHRYAANGTNFMETASFKKKRSKSADIWRE
DSLEFSLSDLSQEHLTSNEEILGLAEEKDAEATRGTEAGGSPQPMVACQRANSMSDLYSP
KTPSATVNGGPRNAFGGYCRNLVSDIPDIGSHKMSSVTAEDTPSYSNYNTLPCRKSHCLS
EGATNPQISHSNSMQGRRAKTTQDVNAGEGSEFTDSGIEGAATDTDLLSRRSNATNSSYS
PTASRAFIGSDSGSSSTGDGLRQGVYENFRRELEMSTTNSENLEEAGSALSDEQSSGTLS
SPGQSDILLTAAQGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYE
TDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTSSQTELENW
ITAIHSACATAVARQHHKEDTVKLLKTEIKKLEQKIDMDEKMKKMGEMQLSSVTDSKKKK
TILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFS
VSSFHALVAARTGEAGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPSINQVFGE
GVDSVKKSLEGIFDDTVPDGKREKEVALSSVHQHNPDCDIWVHEYFTPSWFCLPNNQPAL
TVIRPGDTTRDVLEMICKTHQLDHSAHYLRLKFLIENQIQFYVPKPEEDIYELLYKEIEV
CQKITQHIQIEKSDASSDIYGFSLSSVEEEGIRRLYVNGVKETGLAFKKGLKAGDEIVEI
NKKAAEELDSALLKDALVQPSLCLTVRTYPEIEEGQKLMQPPPRRLENPSDLSDGALAFA
GSSQAGHSLCGDPDSSVETAPEEAEAHDLESSDEADKTSKSTEQVAAFCRSLHEMNPSDS
SAHPQEFTGPQLATMRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLT
PDELDVLFGNLTEMVAFQVEFLKTLEDGVRLVPDLEKLEKVEQFKKVLFSLGGSFLYYAD
RFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRRQHSSTLESYLIKPIQRILKYP
LLLKELFALTDVDSEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIAEQTGEKK
EVADLSMGDLLLHNTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLGGS
HRASIYEDWDPFRFRHMIPLEALQVRALASADAETNSVCEIVHVKSESEGRPERTFHLCC
SSPEHRKDFLKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALKGARPAMNRAVS
APSKSLGRRRRRLARNRFTIDSDAVYTSSPEKEPQQPTHSGDTDRWVEEQFDLAQYEEQE
DIKETDILSDDDEYCEAMRGAVADRDLRERLQAASITSSQPCREHRPRPAMDTHASRMTQ
LKKQAALSGINGDVEGHGEEVIWVRREDFVPSRKLNTEL
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgcggagagccagagcgtggagcacgccttctacggagacaagcacaccagc
ctgggccgcaagcacacttcccgctcgcttcgcctctccaacaaagcctcccgccggacg
cgacatgcttcttctggaaaaattatccaccgtaactcggaagtgagcacccgctccagc
agcacccccagcatcccccagtccctagcagagaacggcctggagcccttcgcccaggag
gccaacctagaggactttggaagccccatctgggtggaccgcatggacatgggcctgcgg
cccgtttcctaccacactgactcctccgtcacccccagcgtggatagcagcaccgtcctc
accgccgcctccgtccagagcatgcccgactcggaggagagcaggctctacggggacgag
ccgccattcctggcggaaggcgacgggaggtcacatcgatacgcagctaacgggacaaac
ttcatggagacggccagcttcaagaagaagcgctccaaatcggccgacatctggcgcgag
gacagcctggagttttcactttctgacctcagccaggagcatttaacgagcaacgaggaa
atcctgggcttggccgaggagaaggatgctgaggctacccgggggacggaggctggtggc
agcccccagccgatggtcgcctgccagcgtgccaactctatgagcgacttgtattccccc
aaaaccccgagtgctaccgtcaatggaggcccgcgaaacgcctttggagggtactgccgg
aatttagtgtctgacatcccggatattgggagccataagatgtcatcggttactgctgag
gatacaccttcctacagtaattacaatacactgccctgtaggaaatcacactgcctttcc
gaaggggccaccaacccacaaattagccatagtaacagcatgcaaggcagaagggcaaaa
actactcaggatgtcaacgcaggcgaggggagtgagttcactgacagtggcatcgaggga
gcagccaccgacactgacctcctttctagacgctccaatgctaccaactccagttactcc
ccgacggccagccgggctttcatcggcagtgacagtgggagcagctcgacgggcgatggg
cttcgccagggagtgtacgagaacttccgccgggagctggagatgagcaccaccaacagc
gagaacctggaggaggccgggtctgccctcagcgacgagcagagcagtggtaccctcagc
tccccagggcagtccgacatcctcctgacggccgcccagggcacagtacggaaagccggt
gctctggcagtgaaaaacttcctggtgcacaaaaagaacaagaaagtggagtcggccacg
cgcaggaaatggaagcactattgggtttccctgaaaggatgcacgttgtttttttatgag
actgatggcagatctggcattgaccacaacagcatcccaaagcacgctgtctgggtggaa
aacagcatagtgcaagcggtgcctgaacaccccaagaaggactttgtcttctgtctcagc
aactcccttggggacgctttcctctttcagacctctagccagaccgaactggagaactgg
atcacggcaatccattcagcttgtgcaactgcggtggcgaggcagcatcacaaagaggac
accgtcaagctcctgaaaacagagattaaaaagctggagcagaaaattgatatggatgaa
aagatgaagaaaatgggtgaaatgcagctgtcctcagtaacggactccaagaagaagaag
accatactggatcaaatcttcgtttgggaacaaaaccttgaacaattccagatggactta
tttcggtaccgctgttacttggctagtctccaaggaggggagctcccaaaccctaaaaga
ctacttgcttttgccagccgtccaacaaaagttgcaatgggccgtcttggaatcttttca
gtctcgtcgtttcatgcactggtggcggctcgcacaggggaggctggagtgaggagaagg
acgcaggccatgtccagatctgccagtaaacggagaagcaggttttcttctctttggggg
ctggatactacctcgaagaaaaagcaagggaggccaagcattaatcaggtgtttggtgaa
ggagttgattcagtaaagaaatctcttgaaggaatctttgacgatacggtcccggatggc
aagagggaaaaagaagtggcactgagcagcgtccaccagcacaatcccgactgtgatatt
tgggttcacgagtattttacgccgtcttggttctgcctgcccaacaaccagccggctctg
acagtcatccgtcctggggacaccacacgagacgtgctggaaatgatttgcaagacacac
cagctggatcactctgctcactacctgcgtcttaaattcctgattgaaaaccagattcaa
ttttatgtaccaaagccagaagaggatatctatgaactgctctacaaagaaatagaagtc
tgtcagaaaattacacagcacattcaaatagagaagtctgatgcatcctctgatatttat
ggtttctctctgtcctccgtggaagaagaaggcattcgtcggctgtatgtgaacggcgtc
aaagagacaggcctagctttcaagaaaggcctgaaagctggcgatgaaattgtggagatt
aacaagaaagctgctgaggagctggactcagctttgctgaaagatgcccttgttcagcct
tcgctgtgtcttaccgtccgcacctatcctgagatagaggaagggcagaaattaatgcag
ccaccaccgcgtcgcttggaaaatccatctgacttgagtgacggcgcgctggcgtttgct
gggagcagccaagcagggcactcgctttgcggcgacccggacagctctgttgagacagct
ccagaggaggcagaagcgcacgacttggagtcatctgatgaggccgataagacgagcaag
agtacagagcaggtcgctgctttctgtcgcagtctgcatgaaatgaacccttctgattca
agtgctcatcctcaggaatttacaggaccccagctggccaccatgagacaactcacagat
gcagacaaactgcgaaaggttatctgtgaacttctcgagacagaacgcacctacgtcaaa
gacttaaattgtttaatggagagatacctaaagcctctacaaaaagaaacgttcctcaca
ccagatgagctggatgttctgtttgggaatctgactgaaatggtagcattccaggtagag
ttcttgaaaactcttgaagatggagtaaggctggttccagacctggaaaagcttgaaaaa
gtggagcaatttaagaaagtgttgttttccttgggtggatcctttctttactacgccgac
cggttcaagctgtacagtgccttctgtgccagccacacaaaagtccccaaagtcctggtg
aaagccaagacagacactgctttcaaggcatttctggatgcgcagaatccccgacggcag
cactcctccacactggagtcttacctcatcaaacccatccagcggatactgaaataccct
ctcctgctgaaggagctctttgctctgactgatgtagacagcgaagaacattatcacctt
gatgtggccataaaaacaatgaacaaagttgccagccacatcaatgaaatgcagaaaatc
catgaagaatatggggcagtgtttgaccaactcatagcagaacaaacaggagagaaaaaa
gaggttgcagacctttcgatgggggacttgctcttgcataatacagtgatatggctgaat
cctcctgcttcactggggaaatggaagaaggaacctgagctggcagcatttgtgttcaaa
accgctgtggtccttgtatacaaggatggttccaaacagaagaagaaacttggaggatca
catagagcttcaatttatgaagactgggatccgttccgctttcgccacatgataccctta
gaagcgctgcaggttcgagcgctggcaagtgcagatgcagagaccaattctgtatgtgag
attgtccatgttaaatctgagtctgaaggcaggccagaaagaacgtttcatctttgctgt
agttcaccagaacacaggaaggactttctgaaggcagtgcactcgattctgcgggataaa
cacagaagacagcttcttaaaaccgaaagcttgccctcatcccagcaatatgttcctttt
ggtggaaaaagattgtgtgctctaaaaggtgcaaggccagccatgaacagggcagtgtca
gccccaagcaagtctcttgggaggaggaggcggcggctggcccgaaacaggtttaccatt
gactcagatgccgtctacacgagcagccctgaaaaagagccccagcagcccacgcacagt
ggggacactgaccgctgggtagaggaacagtttgaccttgctcagtatgaggagcaggag
gacatcaaggaaacggacatcctcagcgatgacgatgagtactgcgaggccatgagaggt
gccgtggccgaccgagaccttcgggagcggctgcaggcggcctccatcacgagcagccag
ccctgccgggaacaccgcccgcgcccggccatggacacgcacgcctccaggatgacccag
ctgaagaagcaggcggccttgtccggcatcaacggtgacgtggagggccacggcgaggag
gtcatctgggttaggcgtgaagactttgtccccagcaggaaactgaacacggagctctaa
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