Rissa tridactyla (black-legged kittiwake): 128904928
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Entry
128904928 CDS
T09443
Symbol
FYCO1
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1 isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128904928 (FYCO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128904928 (FYCO1)
Membrane trafficking [BR:
rtd04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
128904928 (FYCO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
DUF7491
DUF1664
Motif
Other DBs
NCBI-GeneID:
128904928
NCBI-ProteinID:
XP_054045962
LinkDB
All DBs
Position
2:complement(119900820..119956076)
Genome browser
AA seq
1545 aa
AA seq
DB search
MAATSGESQLQRIIRDLQDAVTELSKEFKEGGEPITDDSVNLQKFSYKLEYLLQFDQKEK
NTLLGNRKDYWDYFCDCLAKVKGANDGIRFVKSITELRTSLGKGRAFLRYSLVHQRLADT
LQQCFMNTKVTSDWYYARSPFLNSKMSSDIVGQLYELTDVQFDLASRGYDLDAAWPAFAR
RTLSSLGSSAYLWKPPSRSSSMSSLVSSYLQAQEFPSSPDANSSLNVEHLEGFEEMRVEL
DQAELRQRELQDRIHQLEMENQELQAAVNLQKEQVQVEKEKSNNYSEENSRLTKMITELQ
KQCEVSHSTQSTVHDLQKCLQSLELNAVEQQKEYSTKLEQLVTSKEDCASKLQVLNQELE
ASRALVAMKDLCIDELKAKLSSTEQKNLNLLAKVDAALEEKGQQATAHCDSALQIRALLE
KLQEIEKEKADMQRLNDEHASQLKAAREELQLKEEAQKELESRYNRLTADYKEESEKLRG
SLETMAKEMDAVQKALTLKGNEMAELQTQVMGSLAQVGSLEKKLEEARKEKEKLEEEYGR
REGALKQEAQSQAEQLELQEGRLTKVSQTARSLEDQNQKLLSEKEHLSQKVKELEEQMEQ
QNSAVSEMGEESRKLKAENANLQQSKKKMEGKLKNLEASKASLEAEVAKLRASEKQLQSE
IDDALVSVDEKEKKLRGENKQLDEDLQNARRQSQILEEKLEALHSDYEELKQREETTKES
YASLEGQLKSAKQHSLQMEKSLGALKESKECLQSQLTEKEAELQGMESQCEQLRAEAERH
RKKAETLEVEKLSVEKTCLHQTKLIESLTSEKESVEQHQLQQAASLEKEAKELASRLTVS
EEQLEVNRGEVSRLQAEVLDLRVKLQQITDEREQMRGQLAITETVLSEQKALVQQLKEQS
ESLNRNHVQELVQCKEREEVLKKEQETAVYQKAELENNFMNLKEELSKVKQYLEVARMEN
EENKDLLHRTNTDMAELGIQICALTSEKVDAEEQLSQATEKLKELEEQAAEQQEKLKLDI
SNLRQENKSLQEKLEEAQICAAAVPSLQLQLETVKKQAQSFQETSQEELSAIKFQMSTEI
LNYQTKFKAVSEECGKVREQLEEQRRQQHAAEEEIAELQAANTSLSRKLEEAREQLSESE
TARLQKEEEVTSLRQLLERIQKEADEAKEKVLDYSEKLSKVAADKDSSDQKLFAELDDLT
RTKQFLEERLIELIRDKDALWQKSDALEFQQKLSAEQRWQGDTEVNHCLDCQREFSWMVR
RHHCRMCGRIFCYYCCNNYMVTKPGGKKERCCRACFSKPRVIVDSTDDSGSSANQEGSPA
SLESPVSPSEKALVASEACKPLDDAAFDIITDEELCQVQESDSLHNESEMERDSLDQSVT
DLNSTCNSSTFDESEEWQVAQDAEICLLKSGEIMIKLPLTVEEILNFGESNRELFIKSST
YSIIPITVTEMGLTISWIFSSDPKSISFSVVYQESEDTPLDQCKVLIPMTRCNSHKETIR
GQVKVRNSGIYTLIFDNTFSRFISKRVFYHLAVERPVIYDGSDLP
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaactagtggcgaaagccagctgcagcggattatcagagacttgcaagatgct
gtgactgaattaagtaaagaatttaaagaaggaggggaaccaataacagatgacagtgtc
aacttgcaaaaattctcctacaaacttgagtaccttctacagtttgaccagaaagaaaaa
aacacattgctggggaacagaaaagactactgggattatttctgtgactgtctggcaaaa
gtcaaaggagctaatgatggaatccgctttgtcaagtctattacggaactacgaacatct
cttggaaaaggaagagcatttcttcgctactccctggttcaccaaaggctagcagacacc
ttacagcaatgttttatgaacaccaaggtgaccagtgactggtactatgcaagaagtcca
tttctgaattccaaaatgagttctgacattgtgggtcaactctatgagctcactgatgtt
cagtttgacttggcatcaagaggctatgatttagatgctgcttggccagcatttgccagg
aggacgctgtcctcgcttggatcttcagcatatttatggaagcccccaagtcgcagttcc
agcatgagcagtttagtgagcagttatttgcaggcccaagagtttccttccagccctgat
gcaaatagttcactaaatgttgaacaccttgagggctttgaagagatgcgtgtagaactt
gaccaggctgagctgaggcagagggaacttcaagatcgtattcaccagctagaaatggaa
aaccaggagctccaggcagctgtcaaccttcagaaagaacaagtacaggtagaaaaggag
aagagcaataactacagcgaggagaactcccggctgacaaagatgatcacagagttgcag
aagcagtgtgaggtctcacactccactcagagcactgttcatgacctgcagaagtgcctg
cagtcactggaactgaatgcagtggaacagcagaaggaatactcaacaaagctggagcag
ctggtgaccagcaaggaagactgtgcctcaaaattgcaggtgttgaatcaggagctggag
gcatctagggctttggttgctatgaaggatctttgcattgatgagctcaaagccaagctg
agttccacagaacagaagaacctcaacctccttgcaaaagttgatgctgccttggaggaa
aagggacagcaagccacagcccactgtgactctgccctacagatacgggcactgttagag
aagcttcaggagatagaaaaggaaaaggcagatatgcaaagactcaatgatgaacatgca
tctcagctgaaagcagcaagggaggagctgcagctgaaagaagaggcacagaaggaactg
gaatccagatacaatcgcctcactgctgactacaaagaagagagtgaaaagctgcgtggg
agcctggaaaccatggcaaaggaaatggatgcagttcagaaggccctgaccctgaaagga
aacgagatggctgagctccagacccaggtaatggggtcgctggctcaggtggggtcactg
gaaaaaaaacttgaggaagcaaggaaagaaaaagagaaacttgaggaggagtatggtagg
agggaaggagcactgaagcaggaagcccagtcgcaagcagagcaacttgaactacaggag
ggtcgcttaacaaaggtgagtcagactgcacgtagccttgaggatcaaaaccagaaactc
ttgtctgagaaagagcatctcagccagaaagtcaaggagctggaggagcagatggaacag
caaaactctgcagtgagtgaaatgggtgaggaaagcaggaaactgaaagcggagaatgca
aatttgcagcagtccaagaagaagatggaagggaagctgaaaaatttggaagcttctaaa
gcttccctggaagccgaggtagccaagctgagggcatctgagaaacagcttcagagtgag
atagatgatgccctggtgtcagttgatgaaaaagagaagaaactccggggcgagaacaaa
cagctggatgaagacttgcagaatgccaggaggcaaagccaaattctggaggagaagtta
gaggctctgcactcagactacgaagaactaaagcaaagagaagagaccaccaaggagtct
tatgcttcacttgaaggacagctgaagagtgccaaacagcacagtttacaaatggaaaaa
agcttaggcgccttgaaggaaagcaaagagtgtctccagtcacagctcacagagaaggaa
gcagaactgcaaggcatggagagccagtgtgagcagctaagagcagaagctgaaagacat
aggaagaaagcagagacccttgaggtagaaaagcttagtgttgaaaagacatgccttcat
cagacaaagcttattgaatccctcacatcggaaaaggaatcagtggaacaacaccaacta
cagcaggcggcttctctggagaaggaggcaaaagagctggcttccagattgactgtgagt
gaagagcagttggaggtcaaccgaggggaggtgtctagactgcaagcagaagtccttgac
ctgcgagtcaagcttcagcagatcactgatgagagagagcagatgagaggtcagctggca
atcacagagactgttttgagtgagcagaaggcacttgttcagcagctgaaagagcaaagt
gagtcactcaacagaaaccatgttcaagaactggtgcaatgtaaagaaagagaagaagtg
ctgaaaaaagagcaggagacagcagtctatcaaaaagctgagctggaaaataatttcatg
aacctgaaggaagagctatccaaggttaaacagtacttggaagttgctagaatggaaaat
gaagaaaacaaagatctcctccacaggaccaacacggatatggctgaacttggtattcag
atttgtgccttgacctctgaaaaggtggatgcagaagagcagttatcccaggccacagaa
aagctcaaagaactggaagaacaggcagcagagcaacaggagaagctgaagcttgacatc
tctaatctcagacaggagaacaagagcctgcaagagaaattagaggaagctcaaatatgt
gccgcagctgtcccaagtctgcaattgcagctggagacagtaaagaagcaggcacagagt
ttccaagagaccagccaagaagagctatctgcaataaaatttcaaatgagcacagagatt
ttaaattatcagacaaaattcaaggctgtcagtgaagagtgtgggaaagtaagagagcaa
ctcgaggagcagaggcgacaacagcatgctgcagaagaagagattgcagagttacaagct
gcaaatacgagtttgtccagaaagctggaggaagcaagagagcagctgtctgaatcagaa
actgctcggctgcagaaggaagaggaggtgacatctctgagacaactcttggaaaggatc
caaaaagaagctgatgaagcaaaagagaaggtcctggattacagtgagaagctcagcaag
gtggcagcagacaaagacagcagcgaccagaagttatttgctgaactggatgacctgaca
agaacaaaacagttccttgaagaacgtttgatagaacttatcagagacaaggatgctttg
tggcaaaaatcagatgctctggagttccagcagaagcttagtgcagagcaaaggtggcag
ggggacacagaagttaatcattgtctggactgccagagagagttctcatggatggtgcgc
cgacaccactgcagaatgtgcggtcgcattttctgctactactgctgcaacaactacatg
gtgacaaagccaggtggaaaaaaggagcgttgctgccgagcttgctttagtaaacctaga
gtcattgtggacagtaccgatgactctggatccagtgccaaccaggaaggatcaccagct
tcgttggaatcacctgtgtcaccatctgagaaggctcttgttgcaagtgaagcctgtaaa
ccactagatgatgcagcatttgatataatcaccgatgaggagctgtgtcaagtacaggaa
tcagactctctccacaatgaaagtgagatggaaagagactctctggatcaaagcgtgaca
gatctaaacagcacgtgtaattcttcaacctttgatgaatcggaagagtggcaagttgct
caagatgctgagatatgcttgttgaagtctggagaaatcatgatcaaattaccccttaca
gtggaagagatcttaaattttggggaaagcaacagagagctgttcattaaatccagcacc
tacagtatcattcccatcactgttacagagatggggctaacaattagctggatcttttca
tcagaccctaaaagcatatccttcagcgttgtctaccaagaatcagaagacacaccactg
gatcaatgcaaagttcttattcctatgacccgctgcaactctcataaggaaactatcaga
ggacaggtgaaagtcagaaactctggaatctacaccctgatatttgacaacacattctct
agatttatctcaaaaagagtgttttatcacttggctgtcgagcgacctgtcatctatgat
ggaagtgatcttccatag
DBGET
integrated database retrieval system
