Rissa tridactyla (black-legged kittiwake): 128905721
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Entry
128905721 CDS
T09443
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128905721 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtd03400
]
128905721 (TDG)
Enzymes [BR:
rtd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
128905721 (TDG)
DNA repair and recombination proteins [BR:
rtd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
128905721 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
128905721
NCBI-ProteinID:
XP_054048156
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All DBs
Position
1:158726985..158742816
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AA seq
424 aa
AA seq
DB search
MEAEELGRYYAYLQQAQAFYTFPFHQMMTAAPSMEILTEQPTLEGVPEPNIAQEPPKEVK
KGGRKRKAKATEPKQPKKPAAKKEKSAKSKGKQEKITDTFKVKRKVDRFNGVSEAELLTK
TLPDILTFDLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSNEQLNHMDDHTLP
HKYGIGFTNMVERTTPGSKDLSSKEFREGGRILMQKLQKYKPRIAAFNGKCIYEIFSKEV
FGIKVKNLEFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGI
APNTEVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYCDRAPYESEQCNFSPN
GNAASNPQYCEGPSFGEVPNGQWMTQSFADQIPEFNAVPTVHGGKLNLPRCLMCHIGLIA
EYFP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggagctgggcagatactacgcatatcttcagcaggctcaagctttttac
acgttcccgttccatcagatgatgactgcagcacccagcatggaaatcctgaccgagcag
ccgactctagagggcgttccagagccaaacattgcccaggagcctccaaaagaagtcaaa
aaaggaggaaggaaaagaaaagccaaagcaactgagccaaagcaacccaaaaagcctgct
gctaaaaaagaaaaatcagccaagtcaaaaggcaaacaagaaaagatcacggatactttt
aaagtcaaaagaaaagtggaccgttttaatggtgtgtctgaagcggaacttctgaccaag
actttacctgatattttaacctttgatctggacattgtaataattggcataaaccctggc
ttgatggcagcttacaagggacatcattaccctggacctggaaaccatttttggaagtgt
ctgttcatgtctggtctaagtaatgaacagctgaaccatatggatgatcacaccttgcca
cataaatatgggattgggtttacaaacatggttgaaaggacaacacctggaagcaaagac
ctctccagcaaagagtttcgggaaggagggcgaattctgatgcagaagttacaaaagtat
aaacctcgtatagcagctttcaatggaaaatgtatttatgaaatttttagtaaagaagtt
tttggaataaaagttaagaacttggaatttggactgcagccacacaaggtgccagataca
gaaactctctgctacgttatgccatcatccagtgcaagatgtgctcagtttcctcgtgca
caagataaagttcattattacataaagctgaaagacttaagggatcaactgaaaggcatc
gcaccaaacacggaggtgcaggaggtgcagtacacatttgacttgcaacttgcacaagag
gatgctaaaaagatggctgtcaaagaagaaaagtacgatccaggttatgaagcagcgtat
ggaggagcttactgtgatcgtgcaccgtatgaaagtgaacagtgcaatttctctccaaac
ggaaatgcagcaagcaatccacagtactgtgagggcccgtcctttggtgaagttcctaat
ggacaatggatgacacagtcctttgcagaccagattccagagttcaatgctgttccaact
gtgcatggtgggaagttaaacttaccaagatgccttatgtgccacatcggattaatagcg
gaatactttccatga
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