Rissa tridactyla (black-legged kittiwake): 128906647
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Entry
128906647 CDS
T09443
Symbol
NLRC4
Name
(RefSeq) NLR family CARD domain-containing protein 4 isoform X1
KO
K12805
NLR family CARD domain-containing protein 4
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04621
NOD-like receptor signaling pathway
rtd05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128906647 (NLRC4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128906647 (NLRC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rtd04054
]
128906647 (NLRC4)
Pattern recognition receptors [BR:
rtd04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128906647 (NLRC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nlrc4-like_WHD
NACHT
NLRC4_HD
CARD
LRR_8
LRR_4
NB-ARC
AAA_22
NOD2_WH
AAA_30
LRR_6
nSTAND3
DUF2284
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
128906647
NCBI-ProteinID:
XP_054050183
LinkDB
All DBs
Position
3:36358459..36378862
Genome browser
AA seq
1027 aa
AA seq
DB search
MEFIESNRVHLIQRMGMITVKQIADGLLACNVMSYEEVNTIACERVEQEASRMMIYMILN
KGSEACNILVKSLEKHNPFLFHDLQGYCTTRQVEQDKLNDLIQDLKYVYLSSAFQKYHPL
GSDIDIIFDLGTAYTDILLWKKDIHNSRKGQLTLNVLLEELKNPCIIEGEAGKGKTTLLK
RIAVLWASENCSALKKFQFVFFISLTSTRGGIYETVCDQLLFEQYPICKQDFMKMLLAQR
QRVLFLLDGYDEFKPPNCPEIEAMIKENHKFKNVVIIATRTESIHKIRQFGSLIAEIGDL
SEESCKKLIKNVLTNKMADGLLNQLTEATSMKNLMKTPLFVIIACAIQMGESNFHPSTQT
LLFSTLYDLMVEKNRYKTKEITENHIMLSISHCGDLALDGIFDQRFDFQSEDLADIKEEV
LLASGLLNKYTAQRLKPTYRFFHKSFQEYTAGRKLCELLTSSQEAEVKKGYSYLQKINTI
SDITNTYFNLLLYTCGSSLDATRIILDLLKRVDQHRDISEKNLALEREYTKKSENITEKE
DLKRTDKDIFAECVINFFYESSSKSALSRDFEEFFYDKSIFINTQNIPTYFSDFFRYLPN
CLSVLGLIKLDFFGNYSSNKEIDHGNVEDLQISSLKTYIPEKAVSLFFNWNQSLRSLEIT
LQDFNKLKKRDIKYLGKICCSAESLKLHISNSAGITGTLKEVLETCKNLQDLTVESTPLT
VEDEQQITAMTKLKTLHIRDLQSENLEGGLIDGIKKLVNAEGLVLYRISMDEDDAKKFAE
GIRNLRKLRLLYMNHLTAIGDGITCIVRAVSDELSELEEIQLVNCCISSDAVEILAHNLC
NLPKLNVLDLSENYLEKKGKDAIHRLVDGLSVLPGMKVLMLPWGDDVKVCLTKLLELLET
MPQLTKLGLWKWSLTDVEVRILGNFFEKEHLQNLQHLDLAMNCVTSDGWLSFMQPLISLK
KLVSVDFSSKQDWVPASLLVCKLSQVLTTLNYLKEIKVTGWKFDCHDLGLINDAKINCRK
QFQLVYS
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggaatttatagaaagcaacagagtacatctcattcaaagaatgggaatgatcactgtc
aagcaaatagcagatggccttttggcctgcaatgtcatgtcttatgaggaagtgaatacc
attgcctgtgaaagggttgaacaagaagcctcaagaatgatgatttacatgattttgaat
aagggttcagaagcctgcaatattttggttaagtcacttgagaaacacaacccttttctc
tttcatgacctgcaaggatattgtactaccaggcaagtggaacaagataaattaaatgac
ttgattcaggatttaaagtatgtgtatctatcttcagcttttcaaaaatatcatcctctg
ggtagcgatattgacataatttttgatttgggaactgcctataccgacatcttgctgtgg
aaaaaagatatacataatagcaggaaagggcagctgacgctaaatgtcctgctggaggaa
ctgaaaaatccctgcattatagaaggagaagctggcaaaggaaaaacaactcttctaaaa
agaattgcggtactctgggcttctgaaaattgctctgctttgaaaaaattccaatttgtt
ttctttatcagcctgactagcacaagaggtggaatttatgagactgtctgtgatcagctt
ctttttgaacaataccccatctgcaaacaagatttcatgaaaatgctgctagcacaaaga
caaagggttctttttctgttagatgggtacgatgaattcaaacccccaaactgtccagag
atagaagcaatgattaaagaaaaccacaaattcaagaacgtggttattattgctaccagg
actgagtctatccataaaatcagacagtttgggtcattgattgctgaaataggagaccta
tcggaggagagttgcaagaagctcattaaaaatgtcttgacaaataagatggctgatggc
ctgttaaaccagcttacagaggccacttccatgaagaaccttatgaagacaccactcttt
gtcatcattgcttgtgccatccaaatgggtgaaagtaattttcatccaagcacccagact
ctacttttctctactttgtatgacttgatggtggagaaaaacagatacaaaacaaaagaa
ataacagaaaatcatattatgctgagcataagtcattgtggagacttagctttagatgga
atatttgatcaaagatttgattttcagtctgaggatttagctgacataaaagaagaagtc
ctgctagcttcaggtcttctcaataaatacacagctcaaagactaaagccaacatatagg
ttctttcataaatcatttcaggaatacactgcaggcagaaaactttgcgaactactgaca
tcctcccaagaagcagaggtgaagaaagggtatagttatctacagaaaattaatactatt
tccgatattactaatacttatttcaacttgctcctctacacttgcggatcctctctagat
gccactagaataattttggacttactgaaaagagttgatcagcatagagatatttctgaa
aagaatctggctttggaaagagaatacacaaaaaaatcagaaaatataacagaaaaggaa
gatttaaaaagaactgataaggatatttttgcggagtgtgtcattaatttcttttatgaa
agttcttcaaaatcagccttgagcagagattttgaagagtttttttatgataaaagtatt
ttcattaatactcaaaatatcccaacttatttctctgatttttttagatacttaccaaat
tgtcttagtgtactaggactcattaagttagatttttttggaaattactcatcaaataag
gaaatagaccatgggaatgtggaagatcttcaaattagttcacttaaaacttacattcct
gaaaaggctgtctccttattcttcaactggaaccagagtctcagatctttagaaattaca
ctgcaagatttcaacaagttaaagaaacgtgatattaaatatctgggtaaaatatgttgc
tctgctgaaagcctcaagctgcacatcagcaacagtgctggtatcacaggaacattgaaa
gaagtccttgaaacctgtaaaaacctacaagatcttactgtggagtccactcctcttact
gtggaagatgagcaacagatcacagccatgacaaagctgaaaaccttacatataagagat
ctgcaaagtgaaaatctagaaggtggacttattgatggaataaagaaacttgtgaatgct
gaagggcttgtactttaccgcataagtatggatgaagatgatgcaaaaaaatttgctgaa
ggtatcagaaatttgagaaagctacgcttattatacatgaatcatttgacagccattggg
gatggcataacgtgcattgtaagagcagtctctgatgaactaagtgaacttgaagaaatc
caactagtcaactgctgtatctccagtgatgctgtggaaattctagctcacaatctttgt
aatttgccaaaactgaatgtacttgatttgtcggaaaattacttagaaaagaaaggaaaa
gatgctatccacagacttgttgatggcttaagtgtcctacctgggatgaaagtgctgatg
cttccctggggagatgatgtgaaggtttgcctaacaaaattgttagaactactggaaaca
atgccacagctgacaaaacttggactgtggaaatggagcctcactgatgtggaggtcaga
attctaggcaacttttttgagaaagaacacctgcagaaccttcagcacttggacttggca
atgaattgtgtgacaagcgatggctggctttccttcatgcagccactgatctctctcaag
aagctggtatctgtagatttcagcagcaaacaagactgggtgcctgcatcactgttagtc
tgcaaattaagtcaggtactaaccacactgaattatttaaaggagattaaagtgactgga
tggaagtttgattgccatgatcttggacttattaatgatgcaaagataaactgcagaaaa
caatttcagctagtgtattcttaa
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