Rissa tridactyla (black-legged kittiwake): 128906980
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Entry
128906980 CDS
T09443
Symbol
MTR
Name
(RefSeq) methionine synthase isoform X1
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00270
Cysteine and methionine metabolism
rtd00450
Selenocompound metabolism
rtd00670
One carbon pool by folate
rtd01100
Metabolic pathways
rtd01230
Biosynthesis of amino acids
rtd04980
Cobalamin transport and metabolism
rtd04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
128906980 (MTR)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
128906980 (MTR)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128906980 (MTR)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
128906980 (MTR)
04980 Cobalamin transport and metabolism
128906980 (MTR)
Enzymes [BR:
rtd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
128906980 (MTR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CdhD
NPR1_like_C
IPT
Motif
Other DBs
NCBI-GeneID:
128906980
NCBI-ProteinID:
XP_054051181
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All DBs
Position
3:complement(43964981..44017173)
Genome browser
AA seq
1271 aa
AA seq
DB search
MAPAGADPPDPQKSMGDEIESVLQERIMVLDGGMGTMIQQHALSEEDFRGHEFKDHSRPL
KGNNDLLSITQPDIICDIHKEYLLSGADIIETNTFSSTRVAQADYGLEHLAYRLNRVSAQ
VARKAADDVTAQTGIRRYVAGALGPTNRTLSVSPSVERPDYRNITFDELVEAYKEQAKGL
LDGGVDILLVETIFDTANAKAALFALQTLFEEEYAPRPIFVSGTIVDKSGRTLSGQTGEA
FVISVSHSKPLCIGLNCALGAIEMRPFIETIGKCTTAYIICYPNAGLPNTFGGYDETPEV
TAKHIKNFALDGLVNIVGGCCGTTPAHIRKIAEAVKFCKPRIPPSLSQGYMLLSGLEPFR
IGPYTNFVNIGERCNVAGSRKFAKLIMAGNYEEALGVAKLQVEMGAQVLDINMDDGMLDG
PAAMTRFCNLISSEPDIAKVPLCIDSSNFSVIEAGLKCCQGKCIVNSISLKEGEEDFLEK
ARKIKLYGAAVVVMAFDEMGQATETETKIAICSRAYHLLVEKVHFNPNDIIFDPNILTIG
TGMEEHNLYAINFINATKTIKETLPGARISGGLSNLSFSFRGMDAIREAMHGVFLYHAIK
CGMDMGIVNAGNLPVYDDIHKELLQLCENLIWNKDPDATEKLLHYAQNHAQGGKKIVQTD
EWRKGSVEERLEYALIKGIEKYVTADTEEARLNQGQYPRPLNVIEGPLMNGMKIVGELFG
AGKMFLPQVIKSARVMKKAVGHLIPYMEKEREERRAERGSVEEEDPYHGTIVLATVKGDV
HDIGKNIVGVVLGCNNFRILCHLTSFHRVIDLGVMTPCDKILRAAVENKADIIGLSGLIT
PSLDEMIFVAKEMERLAIKIPLLIGGATTSKTHTAVKIAPRYSAPVIHVLDASKSVVVCS
QLLDESLKDDFFEEILEEYEEIRQEHYESLKERRYLSLQQARRKGFHNDWLSGHKPVKPK
FIGTKVFEDYDLNRLVEYIDWKPFFDVWQLRGKYPNRGFPKIFNDKTVGEEAKRVYNDAQ
NLLKTLINQKKLQARGMVGFWPAQSVQDDIQLYAVEEALGSSEPIAKFYGLRQQAEKDSA
CTDPYYCLSDFIAPLDSGVCDYLGLFAVACFGVDELCNEFRKQDDEYNIIMVKALGDRLA
EAFAEELHERVRREFWAYCSTEQLHLSDLRRIKYEGIRPAPGYPSQPDHTEKLTMWKLAN
IEETTGIGLTESLAMIPASAVSGLYFSNPKSKYFAVGKICKDQVEDYARRKNLSVAEVEK
WLGPILGYDTE
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgccggcgccgacccgccggatcctcagaaaagcatgggagatgaaattgaa
tcagttctgcaggagcggataatggttttggatggaggcatgggtaccatgatccagcaa
catgccctgtcagaagaggatttccgagggcatgaatttaaagatcattccaggcctttg
aaaggaaataatgaccttctcagtataactcaacccgatataatctgtgacatacacaag
gaatacttgctgtcaggcgctgacatcattgaaactaacactttcagcagcacccgagtt
gcacaagccgactatgggcttgagcatttggcatatcggttaaacagagtctctgcgcag
gtggccagaaaagcagcagatgatgtaactgctcagacaggaattaggagatatgttgct
ggagccttgggtccaacaaacaggacgctctctgtgtcaccatctgtggagagaccagat
tacaggaacataacttttgatgaactggttgaagcttataaggagcaagccaaaggactt
ttggatggaggagttgatatcttgttggtggaaaccatatttgatacagccaatgccaag
gcagctctctttgcactgcagacgttgtttgaagaagagtatgctccccgacccatattt
gtttctggaaccattgtggataagagtgggcgtaccctgtcaggccagacaggagaggca
tttgtcattagtgtttcccacagtaagccactttgcatcggcttaaattgtgcattaggg
gcaattgaaatgcgaccgtttattgaaaccattggaaaatgtacaacagcctatatcatc
tgttaccccaacgcaggtcttcccaatacttttggtggttatgatgaaactccagaagtg
actgccaagcatataaagaattttgctttggatggtttggtcaacatagttggaggttgc
tgtggtactacacctgcacatatcaggaaaattgctgaagctgtgaaattctgtaagcct
cgcattccgccttctctctcccaaggatacatgctgctgtcgggtctggagccattcagg
attgggccatacaccaacttcgttaatattggcgaacgctgcaatgttgcaggatcacgg
aagtttgctaaactcatcatggcaggcaactatgaagaagccctgggtgtagccaaattg
caagttgagatgggggcccaggttcttgacatcaatatggatgatgggatgctggatggc
cctgctgcaatgaccagattttgtaacttgatttcttcagaacctgatattgcaaaggtg
ccattatgcattgactcctcaaatttttcagtgattgaagcaggtttaaaatgttgccaa
gggaaatgcattgtaaacagcatcagtctgaaggaaggtgaggaagactttttggagaaa
gcaaggaaaattaagttgtatggagcagctgtggttgtcatggcttttgatgaaatgggg
caggcaacagaaacagaaaccaagattgcaatttgttccagagcttatcacctccttgtg
gaaaaagtgcacttcaatccaaatgatataatatttgaccctaatattttgaccatagga
actggaatggaagaacataacctgtatgccatcaattttatcaacgctactaaaaccata
aaagaaacactgccgggagccaggataagtggaggtctttccaatctgtctttttccttt
cgaggaatggatgccattcgagaagcaatgcatggggtcttcctttaccatgcgattaag
tgtggcatggacatgggaattgtgaatgctgggaatctgccagtgtatgatgatatccac
aaggaattgctacagctgtgtgagaatctaatttggaacaaagatcctgatgcgacagag
aaacttttacattatgctcagaatcatgcccaaggaggaaaaaaaattgtacagactgat
gagtggcggaaaggctctgttgaggaaaggctggaatatgccctcataaagggcattgag
aagtatgttactgcagatacagaagaagcaagattaaatcagggacaatatcctagacct
ctaaatgtaattgaagggcctttgatgaatggtatgaaaattgttggggagctttttggt
gccggaaagatgtttctgcctcaggtgataaaatctgctcgagttatgaagaaagcagtt
gggcaccttattccctatatggaaaaagaaagagaagaaaggagagctgaacgaggcagc
gtagaggaagaggatccttatcatggaacaatagtactagcgactgtgaaaggagacgta
cacgatatcggcaagaacattgtgggagttgttctgggctgcaacaacttcagaatcttg
tgtcatctcacttcttttcacagagttattgatttaggagtcatgactccatgtgataag
atattgagagctgctgttgagaacaaagcagatataattggcctgtctggtctcatcacc
ccttctttggatgaaatgatttttgtcgccaaggaaatggagagattggcaataaagatt
cctttgctgattggaggagcaactacttctaaaacacacacagctgttaaaattgcccca
cgatatagcgcacctgtaattcatgtcctggatgcatccaagagtgttgtggtttgctcc
cagctcttagatgaaagtttaaaggatgatttctttgaagaaatactagaggagtatgaa
gaaattaggcaagaacactatgagtctctcaaggaaagaagatacttgtctctccagcaa
gctagaagaaaaggtttccataatgactggttatcaggccataaaccagttaaaccgaaa
ttcatcggcacaaaagtctttgaagattatgacctgaacaggctggtagaatacattgac
tggaagcctttctttgatgtctggcagcttaggggaaagtatcccaacaggggtttcccc
aaaatctttaacgataaaactgtaggtgaagaagcaaagagagtttataatgatgctcaa
aatctactgaaaacattgattaatcaaaagaaattacaagccagaggtatggttgggttc
tggccagctcaaagtgttcaagacgatatccaattatatgctgtagaagaggcactggga
tcttcggaaccaatagcaaaattttatggcttgaggcaacaggctgaaaaggactctgcc
tgcacagatccatattactgcctctctgacttcatagcaccactggattctggcgtttgt
gactacctaggcctgtttgctgtggcctgctttggtgtagacgagttatgcaatgaattt
aggaaacaggatgatgaatacaacatcatcatggtaaaggctcttggcgatcgcttggca
gaggcatttgctgaggagctccatgaaagggttcgaagggaattctgggcttattgtagt
actgagcagctacatctctctgacctacgcagaattaaatatgagggaattcgccctgcc
cctggatatccaagccagcctgaccatacagaaaaactcaccatgtggaaactcgcaaat
atcgaggaaacaacaggaattggtttaactgaatcactagcaatgatacctgcttctgca
gtttctggcctctacttctccaatcccaaatccaaatattttgctgttggcaagatatgt
aaagatcaggttgaagattatgcacggagaaaaaatttgtctgtggcagaggtggagaaa
tggctgggacccattttgggatacgatactgaataa
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