Rissa tridactyla (black-legged kittiwake): 128908464
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Entry
128908464 CDS
T09443
Symbol
NR1H3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03320
PPAR signaling pathway
rtd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128908464 (NR1H3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
128908464 (NR1H3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128908464 (NR1H3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rtd03310
]
128908464 (NR1H3)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128908464 (NR1H3)
Nuclear receptors [BR:
rtd03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
128908464 (NR1H3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
128908464
NCBI-ProteinID:
XP_054054701
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Position
4:47084006..47113398
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AA seq
409 aa
AA seq
DB search
MGPNQLSTQDHGKRVASVFEMEEQGLSLFPGSENPPEHAENPPLKRKKGPAPKMLGNEVC
SVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAQYVCKNGGKCEMDMYMRRKCQECRLRKC
QEAGMREQYVLSEEQIQLKKLKKQEDDQARTVVVRPTPPNPPSPSHKLTPEQLSMIKKLV
AAQQQCNQRSFTDRLKVTPWPQVPDPNNREARQQRFAHFTELAIISVQEIVDFAKQLPGF
LELTREDQIALLKTSTIEVMLLETSRRYNPEIESITFLKDLSYNRDDFAKAGLQFEFINP
IFEFSKGMNELQLNDAEYALLIAINIFSADRPNVQDQSLVERLQHTYVEALHSYICINRP
NDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccaatcaactcagcacacaggatcatgggaagagggtggcaagtgtatttgag
atggaggagcaagggctttcgctcttccctggctcagagaacccccctgagcatgcagaa
aatccccccctgaagcggaagaagggcccagctcctaagatgctgggaaatgaagtgtgc
agcgtgtgtggggacaaggcctctggcttccactacaacgtgctgagctgtgaaggctgc
aagggcttcttccgccgcagtgtcatcaagggtgcacagtacgtctgcaagaatggcggc
aagtgtgagatggacatgtacatgcgtcgcaagtgtcaggaatgccggctgcgcaagtgc
caggaggcgggcatgcgggagcagtatgttctttctgaagaacagatccaactgaagaaa
ctgaagaagcaggaagatgatcaggctcggacagttgtggtgcgtccaacccctccgaat
ccaccaagcccttcccacaaactgacacctgaacagttgagcatgataaaaaaacttgtg
gccgctcagcagcagtgcaaccagcgctcattcacagacaggctcaaagtgacgccatgg
ccccaagttcctgaccctaataaccgtgaagcaaggcagcagcgctttgctcacttcaca
gaacttgcaattatctctgtgcaagagattgtggactttgccaagcaactacctggcttc
ctggagctcaccagggaagatcagatcgctttattgaagacatctaccatagaggtgatg
ttgttggagacatctcgacgctacaatccagagattgagagcatcacctttcttaaggac
ctgagctataatcgggatgacttcgccaaagcaggtctgcagtttgagttcattaacccc
atctttgagttctcaaagggaatgaatgagctacagctcaacgatgctgaatatgcactt
ttaatcgccatcaacattttctctgcagaccgaccgaatgtgcaggaccagtccctggtg
gagaggctgcagcacacctatgtggaagcccttcattcttacatttgcatcaacagacca
aatgaccgcttgatgtttccacggatgttaatgaagctggtcagtcttcggacactaagt
agtgtccactctgaacaggtgtttgcccttcggctgcaggacaagaaacttcctcccctg
ctctcagaaatctgggatgtgcatgagtga
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