Rissa tridactyla (black-legged kittiwake): 128908585
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Entry
128908585 CDS
T09443
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04620
Toll-like receptor signaling pathway
rtd04621
NOD-like receptor signaling pathway
rtd04622
RIG-I-like receptor signaling pathway
rtd05164
Influenza A
rtd05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128908585 (TRAF3)
04621 NOD-like receptor signaling pathway
128908585 (TRAF3)
04622 RIG-I-like receptor signaling pathway
128908585 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
128908585 (TRAF3)
05168 Herpes simplex virus 1 infection
128908585 (TRAF3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
zf-C3HC4
Cast
Sina_ZnF
MPS2
ATG16
FliJ
Spc29
Tropomyosin
KxDL
zf-RING_6
DUF1664
Crescentin
SPATA24
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
128908585
NCBI-ProteinID:
XP_054055100
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All DBs
Position
4:60143253..60211390
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AA seq
567 aa
AA seq
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MDSSKKTEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHFILC
NPKQTECGHRFCETCMNALLSSSSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLKTDCQFEELSCPHADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacagcagtaagaagacagaaccccctttgtctgtagaaatggtacaacaaagagcc
aatcctgatcgcagtccttcagcatcgatttatgttccagagcaaggtggctacaaagag
aaatttgtaaatgccgtggaagataagtataaatgtgaaaaatgtcacttcatcttatgc
aatcctaaacagactgaatgtggacacagattctgtgagacctgcatgaatgccttgcta
agttcttctagtccaaaatgtacagcgtgtcaagaaagcatagtaaaagataaggtattt
aaagataattgttgcaggagagaactacttgcccttcaaatatactgcagaaatgaaaac
aagggctgtaaagaacaactatctttgggtcaattactgatgcatttgaaaactgattgt
cagtttgaagaactctcgtgtcctcatgctgattgcaaagagaaaatactgagaaaagat
ttgccagaccatgtagagaagacctgtaaataccgggagacaacctgtaaatattgcaaa
agccaagtcccaatgattatgttgcagaaacatgaagatacagactgcccgtgtgtcatg
gtttcatgtcctcataaatgtagtgttaaaacactcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtgatagacagtcaagcggagaaactgaaagaactggacaaagaaatccgtcccttccga
cagaactgggaggaggctgacagcatgaagagcagcgtagaatccctccagaacagagtg
actgagctggaaagtgttgataaaactgcagggcaaggagctcgaaatacaagcctgcta
gagacacagctgagcagacatgatcagatgctgagtgttcatgatattcggctggctgac
atggacctccgattccaagttttagaaactgccagttacaacggagtattaatttggaaa
attcgagattataaacgtcggaagcaagaggcagtcatggggaagactctgtccttgtac
agccagcccttttatactggatactttggctacaagatgtgtgccagagtttacctcaac
ggagatggcatgggaaaggggacgcacttgtcgctgttttttgtcataatgcgtggagaa
tacgatgcgttgcttccttggccgtttaaacagaaggtgactctcatgctaatggatcag
ggaccgtctcgacgccacttaggagatgctttcaagccagatccaaacagcagcagtttc
aagaagccaactggagaaatgaacattgcatctggctgcccagtctttgtggctcaaact
gttctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcggatctaccagacccctga
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