Rissa tridactyla (black-legged kittiwake): 128908805
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Entry
128908805 CDS
T09443
Symbol
EXD2
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2 isoform X1
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtd03400
]
128908805 (EXD2)
Enzymes [BR:
rtd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
128908805 (EXD2)
DNA repair and recombination proteins [BR:
rtd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128908805 (EXD2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RRXRR
Cas_CXXC_CXXC
Motif
Other DBs
NCBI-GeneID:
128908805
NCBI-ProteinID:
XP_054055636
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All DBs
Position
4:41095855..41118715
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AA seq
621 aa
AA seq
DB search
MPKQTAVTITLATLLGVAVGGLVLWKATQRRKGKACCSSQREEAVINSGDEELIKAEDKE
VLSFFRSPTFSWVERTLGADIVVVSEQEEWDRVEPLLKKELEKWPVLGVDCEWVSVEGKA
NPVSLLQMASSSGLCILVRLPRLVASGQTIPKTLVDILADSTVLKVGVGCWEDACKLFHD
YGLPVKGSVDLRYLAMRQRKDLLHNCLSLKSLAEKVLNCPLDKSPHVRCSNWEAEELTQD
QVLYAARDAQVSVALFLHLLGFASLPATSDGENSIAAWEKALGKCRGLVDIPFRGRRSGS
TGEEKSGEGRSPQKTKNRKSSVNGQPSGNQQVRDPRRHKRKPLGVGYSARKSPLYDNCFL
HAPDGQPLCTCDRKKAQWYLDKGIGELVSTEPFVVKLRFEPSGRPESQVDYYLTVKENLC
VVCGKRESYIRKNIVPHEYRRHFPIQMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAEE
FGAPIGSEEGVRLLEDPLRRQVRSGARALLNADSLPDPRRAELLQSIKDFFNTEAVTPEM
LQEAADLETRICNESYVPHGLKVVQCFAKGGLRSLMQLERRWRQHFLDNMQPKHLPEQWS
VDHNHMKLIRKYGEDLQIELS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcaaacagcagtgacgattactttggcgaccctcctgggtgttgcagtgggg
ggcctggttttgtggaaagcaacgcagcgtcggaaaggaaaagcatgctgtagtagtcag
cgagaggaagcagttataaactcgggagatgaggaactgattaaggcagaggataaggag
gtgctttccttcttcagatctcccaccttttcctgggtagagaggacccttggtgcagac
atagtggtagtttcagagcaggaggagtgggatcgtgttgaacctttgctgaagaaggag
ctggagaagtggccggtgcttggagttgattgtgagtgggtatctgtggagggaaaagca
aatcctgtatccctcctacagatggcttcatccagcggtctctgcattcttgttcggttg
cccaggcttgttgccagcggacagactatcccaaagaccctggtggacatcctggcagat
agtactgtgttgaaagttggggtaggatgctgggaagatgcttgcaagttatttcatgat
tatggtcttccagtcaaagggagcgtggatctccggtatttagccatgagacagcggaag
gatctacttcacaactgccttagccttaagtctttagctgaaaaagtcctgaactgcccg
cttgacaagtctcctcatgtgcgttgcagcaactgggaggcagaagaactgacacaagat
caggttctctatgctgctagggatgcgcaggtctcggtggctctattcctccatttgctg
ggatttgccagccttcctgcgacatctgatggtgaaaattctatcgctgcttgggaaaaa
gcactgggtaaatgccggggcttggtggatatcccatttagaggaagaaggagtggcagc
acaggagaggagaaaagtggagaggggcggtcccctcagaaaacaaagaatcggaaatcc
tcagtgaatggccagccctctggcaatcagcaagtgagagatccacggaggcacaagcga
aagcctctgggcgtgggatattctgcacggaaatctccactgtatgacaactgcttcctg
catgcaccagatggacagcccctgtgcacctgtgatcgcaagaaggctcagtggtatctg
gacaaggggattggagagctagttagcacagagccatttgttgtgaagctgcgatttgag
ccttcaggacgtcccgagtctcaagttgattattatctgacagtcaaagagaacctgtgt
gttgtatgtggcaagcgagaatcctatatccggaagaacattgttcctcacgaataccga
agacacttccccatccagatgaaggaccacaactcccatgacgtgctcctactttgcacg
tcctgccatgccatctccaattactatgacaaccacctcaagcagcagctggctgaggag
tttggtgcccccatcggctctgaggaaggtgtgcgtctgctggaggaccctctgcgcagg
caagtgcgctcaggggctcgagccctgctgaatgcagacagcctgcctgacccccgaagg
gcagaacttctgcaaagcatcaaggacttcttcaacacagaggcagtcactccagagatg
ctccaggaagcagctgatctggaaaccaggatctgcaatgagagctacgtgccacatgga
ctgaaggtggtgcagtgttttgctaaaggaggcctgcgctcccttatgcagttggagaga
cgctggcggcagcatttcttggacaacatgcagcccaaacacctcccagagcaatggtca
gtggaccataaccacatgaagctgatccgaaagtatggggaggatcttcagattgaactg
tcatga
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