Rissa tridactyla (black-legged kittiwake): 128912585
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Entry
128912585 CDS
T09443
Symbol
RAPGEF4
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04081
Hormone signaling
rtd04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
128912585 (RAPGEF4)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
128912585 (RAPGEF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128912585 (RAPGEF4)
Membrane trafficking [BR:
rtd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
128912585 (RAPGEF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
Motif
Other DBs
NCBI-GeneID:
128912585
NCBI-ProteinID:
XP_054064760
LinkDB
All DBs
Position
7:25505820..25661971
Genome browser
AA seq
1026 aa
AA seq
DB search
MVAAHTSHSSSSGEWIACLDKRPLERSSEDVDIIFTRLKEVKAFEKFHPNLLQQICLCGY
YENLEKGITLFRQGDIGTNWYAVLTGSLDVKVSDTSNHQDAVTICTLGIGTAFGESILDN
TPRHATIVTREYSELLRIEQKDFKVLWEKYRQYMSGLLTPPYGVMETGSNNDRMPDKDGM
SSGALCQVSKNCNKTPLIEPHIPHRPTKTITQVPSEKILRAGKILRNTILSRAPHMIRDR
KYHLKTYRQCCVGTELVDWMMQQSPCVHSRTQAVGMWQVLLEEGVLNHVDQEHHFQDKYL
FYRFLDDEHEDAPLPTEEEKKECDEELQDTMLLLSQIGPDAHMRMILRKPPGQRTVDDLE
IIYEELLHIKALSHLSTTVKRELAGVLIFESHPKAGTVLFNQGEEGTSWYIILKGSVNVV
IYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTV
RLKEHDQDVLVLEKIPAGSRVSNQGNSQPQHKYIVMSGTPEKILEHFLETMRLEATLSEA
TDSVLNDFIMMHCVFMPNSQLCPALMAHYHAQPSQGTEQEKMDYALNNKRRVIRLVLQWA
ALYGDLLQEDEAAMAFLEEFYVSVSDDTRMIAALKEQLPELEKIVKQISEEPKASQKKHK
VLLQLFNTSDDRAQKRQPIRGSDEVLFKVYCVDQTYTTIRVPVSSSVKEVISAVADKLGS
GEGLIIVKMSSGGEKVVLKPHDVSVFTTLSVNGRLFACPRDEFDSLAPLPEQEGPSTGTV
GTFELMSSKDLAHQMTIYDWELFNCVHELELIYHTFGRHNFKKTTANLDLFLRRFNEIQF
WVVTEICLCSQLSKRVQLLKKYIKIAAHCKEYKNLNSFFAIIMGLSNVAVSRLSLTWEKL
PSKFKKIYAEFESLMDPSRNHRAYRLTVAKLDPPIIPFMPLLIKDMTFTHEGNKTFTDNL
VNFEKMRMIANTVRTVKFCRSQSFNPDAALTNKNHQDVRSYVRQLNVIDNQRTLSQMSHR
LEPRRA
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccgctcacacctcccattcctcatcctccggcgagtggatcgcttgcctggat
aaaagacctttggaacgttccagtgaagatgtagatataatattcacaagactgaaagaa
gtgaaagcttttgagaaatttcatccaaaccttctccagcagatatgtctgtgtggatat
tatgaaaatctggaaaaaggaatcacattatttcgtcagggtgatattgggaccaactgg
tatgctgttctgacaggatcactggatgtgaaggtttctgatacgagcaaccaccaggat
gctgtgacaatatgcactctgggaataggaactgcttttggagagtccattctggataac
actcctcgccatgcaaccatcgttaccagagaatatagcgagctccttcgaattgagcag
aaggactttaaggtgctttgggagaaatatcgacagtatatgtctggacttctcactcct
ccttatggtgttatggaaactggctccaacaatgacagaatgccagataaggacggtatg
tcaagcggcgcactttgccaagtttctaaaaattgtaataagacacctcttattgaacct
cacatcccacatcgtcctactaaaaccattacacaggttccttcagaaaagatcctcaga
gctggaaagattttgcggaatacaattctgtcccgagcccctcacatgataagagatcgt
aaataccatctgaagacttacaggcaatgctgtgtggggacagaactagttgactggatg
atgcagcaaagtccttgtgtccattcacgaacccaggctgttggcatgtggcaagtattg
ctggaagaaggtgttcttaaccacgtggatcaggaacaccactttcaagacaagtactta
ttttatcgatttttggacgatgagcatgaagatgcccctttgccaactgaggaagagaaa
aaagaatgcgatgaggagctacaggacactatgctgcttctgtctcagattgggccagat
gctcatatgaggatgattctcagaaaaccgcctggccagagaactgtagatgacttagaa
attatatatgaagaacttcttcacattaaggccttatctcatctttctaccacagtaaag
cgagaattagcaggtgtcctcatttttgagtcacatcccaaagcaggaacggtcttattt
aatcagggagaagaaggtacttcttggtacattatcctaaagggatcagtaaacgtagtc
atttatggcaagggtgtggtgtgtactttacacgaaggagatgattttggcaagttagcg
cttgtgaatgatgctcccagagcagcttccattgttctgcgtgaagacaactgccacttc
ttgagagtagacaaagaggacttcaacaggattcttagggatgtggaagcaaatacagta
agactcaaagaacatgaccaagatgtcttggtgttggagaagatcccagcaggaagcaga
gtttctaatcaaggaaattcacagccccagcacaagtatatcgtgatgtcaggaacccca
gagaaaattttagagcactttctagaaactatgcgccttgaagcaactttaagtgaagca
acagattctgttttaaatgattttattatgatgcactgtgtttttatgccaaatagtcag
ctctgcccagccttgatggcacactatcatgcccagccttcccagggtacagagcaggag
aaaatggattatgccctcaacaataaaaggcgagtcattcgactggttctgcagtgggct
gctttatatggagatctactacaagaagatgaagcggcaatggcctttttggaggaattt
tatgtatctgtatcagatgatactagaatgattgcagcactaaaggagcaacttccagag
ctagagaaaattgtaaagcaaatttctgaagaacctaaagcatcacaaaagaagcacaaa
gttcttctgcagctgttcaacacaagtgatgacagagcacagaaacgccagcctatcagg
ggcagcgacgaagttctgtttaaggtgtactgcgtagaccaaacctacaccactatccgg
gtgccagtgtcttcctctgtgaaggaagtgatcagcgcagtagctgataagctgggttct
ggagaaggcctcatcatcgtaaagatgagctcaggaggagaaaaggttgtgctcaaacct
catgatgtttcagtgtttacaactctcagtgttaacggccggctgtttgcttgcccacgg
gatgagtttgattcattggcaccattaccagaacaagaaggaccatctactggtacagtg
ggaacatttgaactgatgagctccaaagacctagcacatcagatgacaatttatgactgg
gagctcttcaactgtgtgcatgagctggaattgatctatcacacttttggaaggcacaat
tttaaaaagaccacagcaaatctggacttgtttttaagaagatttaatgaaattcagttc
tgggtggtcactgagatttgtctttgctctcaactcagcaagcgcgttcagctgttaaag
aagtatattaagatagcagcccactgtaaagaatacaaaaatctgaattcctttttcgct
attattatgggactgagtaatgttgctgtgagccgtctctcgttaacgtgggagaaactt
ccaagcaagttcaagaagatctatgcagagtttgaaagcttaatggatccatcaagaaac
catcgggcctacagactaactgtagctaaattggaccctccaataattcctttcatgcca
ctacttataaaagacatgacgtttactcatgagggaaacaagacattcactgacaatcta
gtaaacttcgaaaaaatgcgcatgattgccaacactgtcaggacggtgaaattctgccga
agccaatctttcaatcctgacgcagccctaactaataagaaccatcaggatgttcggagc
tatgtgcggcaattaaatgtgattgacaaccagagaactttatcacagatgtctcaccga
ctggaaccgcgtcgagcataa
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