Rissa tridactyla (black-legged kittiwake): 128913501
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Entry
128913501 CDS
T09443
Symbol
DHX9
Name
(RefSeq) ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtd03041
]
128913501 (DHX9)
03012 Translation factors [BR:
rtd03012
]
128913501 (DHX9)
Enzymes [BR:
rtd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128913501 (DHX9)
5.6.2.6 RNA 3'-5' helicase
128913501 (DHX9)
Spliceosome [BR:
rtd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128913501 (DHX9)
Translation factors [BR:
rtd03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
128913501 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
HA2_N
DEAD
HA2_C
AAA_19
Dicer_dimer
ResIII
nSTAND3
AAA_14
Motif
Other DBs
NCBI-GeneID:
128913501
NCBI-ProteinID:
XP_054067155
LinkDB
All DBs
Position
8:complement(27965618..27993007)
Genome browser
AA seq
1239 aa
AA seq
DB search
MGDVKNYLYAWCGRRKLTPAYEIRAGGGRSRQTFLCEVRVEGFNYVGMGNSTNKKDAQSN
AARDFVNYLVRVNEMKREEIPAFGPAGGDTPDGHDTARDVTGSTSTLGGPLPPHLILEAE
IGNGPGAAPGNCGNRGAQWDRGANLKDYYSKREEQEVQATSESEVDLNADLHGNWTLENA
KARLNQFFQKEKIQEEYKYTEMGPDHNRSFIAEMNIYVKQLGRRIFGREHGSNKKLAAQS
CALSLVRQLYHLGVIEPYSGQTKKKGESVEPFEVSLSSDLENRLQNIVQELSLEIVPLPE
DPSNPVVINVGKLAHFEPSQRQSHIGVVPWSPPHSNWNPWTSCNIDEGPLANLTPEQISM
DLKSDFMYRLEQDKELQRIQQEREALPVKNFESEILDAVHHNSVVVIRGATGCGKTTQVP
QYILDEYIKTDRAAECNIVVTQPRRISAVSVAERVSYERGEQPGQSCGYSVRFESVLPRP
HASVMFCTVGVLLRKVEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEIRVILM
SATIDTSMFCEYFFNCPIVEVFGRTYPVQDYFLEDCIQMTQFVPPPKEKKKKEKDEEGGE
DDDANCNLICSDEYGPETKHAMAQLNEKETSFELIEALLIYIKTLNVPGAVLVFLPGWNL
IYTMQKHLEMNPRFGGRQYRILPLHSQIPLEEQRRVFDPVPPGVTKVILSTSIAETSITI
NDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRAGFCFHLCSRARF
ERLQTHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAERTLRELDAL
DSNDELTPLGRILAKLPIEPRLGKMMIMGCIFYVGDAICTISAATCFPEPFINEGKRLGY
VHRNFAGNRFSDHVALLSAFQAWDDARMGGEEAEKRFCERKRLSMATLRMTWEAKVQLKE
ILINSGFPEECLMTQPFNNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGHNALI
HKSSVNCPFSSQDIKYPSPFFVFGEKIRTRAISAKAMTLVSPLQLLLFASKRVLSDGELI
LVDDWIKLKMPHTAAACITALRAAMEALVVEVTKDPEIIRQLDPANERMLNVIRQISRPS
AAGISLMAANTRFGDGPRPPKMPRYDNGGGFRGWGGSLRGSGYRGRGYGGYGWRGGGRGS
HGGPGGGYRGGGGYRGGGGYRGAGGGYRGGCGDVGRGRW
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgtgaagaactacctgtacgcttggtgcggcaggaggaagctgacgccggcc
tacgagatccgcgccggcggcggccggagccgtcagacctttctctgcgaggttcgagtg
gaaggctttaactacgtgggcatggggaattccactaacaagaaagacgcgcagagcaat
gctgctcgagactttgtcaattacttagttcgggtgaatgaaatgaagagagaggaaatt
cctgcttttggcccagcaggtggtgatacccctgatggccatgacacagctagagatgtt
actggttccacttctactttgggtggccctcttcctccgcatttgattctagaggctgaa
ataggcaatggcccaggtgcagcacccggaaactgtggcaatcgtggagctcagtgggat
cggggcgcaaatttgaaagattactattcaaagagagaggagcaagaagtgcaggcaacc
tcggagtcagaagtggacttaaacgccgatcttcacgggaattggaccttggaaaatgcc
aaggcacgcctgaaccagtttttccaaaaggagaagattcaggaagaatataaatacacc
gaaatggggcctgatcacaacaggagctttattgcagaaatgaacatttacgtgaagcag
ctgggcagaaggattttcggtcgtgagcatggatcaaacaaaaagctggcagcacagtcc
tgtgccctttccttggttagacagctctaccatcttggtgtcatagaaccttattccgga
cagacaaagaaaaaaggagaatcggtggaaccctttgaggtgtcgctgtcttctgactta
gagaatcggctgcaaaacattgtgcaggaactgtctctggagattgtgccattgcctgag
gatcccagtaatccagttgtgattaatgttggaaagttggcccacttcgaaccatcgcag
agacaaagtcatataggagttgttccgtggtcaccacctcattccaactggaacccttgg
accagctgcaatattgatgagggtcctctggcaaatctcactccagagcaaataagcatg
gatttgaaaagtgatttcatgtaccgtttggagcaggacaaagaattgcaaaggatccaa
caagagagagaagccttacccgtgaagaattttgaaagtgaaattctggatgcagtccat
cacaattctgttgttgtaattcgtggtgccactggttgtggcaaaaccacccaagttcca
caatatatcctggatgaatacatcaaaaccgacagagctgcagagtgcaacatagtcgtg
acacagcctcggaggattagtgccgtttctgtagcagagcgtgtgtcgtatgagagagga
gaacaacctgggcaaagctgtggatacagcgtgcgatttgaatctgtgcttcctcggccg
cacgccagtgtcatgttctgcactgtaggtgttcttctgagaaaggtggaggctgggatc
cgtggcattagtcatgttatcgttgatgagatccatgagagagacattaacactgacttt
ctcttggtggtgctgagagatgtagttcaggcatatcctgaaatcagggttatcctcatg
tctgccacgatcgatactagtatgttttgcgaatacttcttcaactgtcctatcgttgag
gtctttggtagaacctaccctgtccaagattatttcctggaagattgcattcaaatgact
cagttcgttcctccaccaaaggaaaagaagaagaaagagaaggatgaggaaggtggtgaa
gatgatgatgccaattgcaaccttatttgcagtgatgaatatggcccagaaacaaagcac
gccatggctcagctgaatgagaaggaaacttcttttgaactcattgaggccctgctaatt
tatatcaagaccctgaatgtcccgggagctgtacttgttttcttgcctggctggaacttg
atatatacaatgcagaagcatctagaaatgaatccacgctttggaggccgccagtataga
attctacctctgcattcccaaattcctctggaggaacaacgtcgagtgtttgatcctgtg
cctcccggagtaacaaaagttattttatctaccagcattgcagagactagcattaccatc
aatgatgtggtctacgttatagactcctgcaaacaaaaagtgaagctgttcactgctcat
aataacatgacaaactatgccacagtctgggcatcaaaaactaatttggagcagcggaaa
ggaagagccggacgtgtgcgtgctggattctgtttccatttgtgcagcagagctcgcttt
gaaagacttcaaactcatatgacacccgaaatgtttcggacaccacttcatgaaattgct
ttgagcatcaaattactgcggctgggaggaattggtcagtttttggccaaagcaatagag
ccgccacctttggatgcagtgattgaagcagaacgcacgttaagagagcttgatgccctg
gattccaatgatgagttgacacctcttggaagaatcctagccaaacttcccattgaacct
cgtcttggcaagatgatgataatgggctgtattttttatgtgggagatgctatttgtacc
atctctgcggctacctgtttccctgaacctttcatcaatgaaggcaaacgcctgggttat
gtccataggaattttgctgggaacaggttttcagatcacgttgctttgctctccgccttc
caagcctgggatgatgcaagaatgggtggtgaagaagcagaaaaaagattttgtgaacgc
aaaagactcagcatggctactcttagaatgacttgggaagcaaaagtccagctgaaagaa
atacttattaattctggcttccctgaagaatgtttgatgactcaaccatttaacaacact
ggaccagataataatctggatgttgtaatctccctgcttgcttttggggtctaccccaat
gtctgctaccacaaggagaagaggaaaattcttaccactgaggggcacaatgcgctcatc
cacaagtcatctgtcaactgccctttcagcagccaggacatcaagtatccctcacctttt
tttgttttcggagaaaagattcgaacgcgagccatctctgccaaagccatgaccttggtg
agcccgctgcagctgctgctctttgcctccaagagggtcctgtcggacggggagctcatt
ctggtggacgactggatcaagctgaagatgccccacacggcagctgcctgcatcaccgcg
ctgcgtgctgcaatggaggctcttgttgtggaagtaactaaagatccggagatcattcgg
cagctggacccagcgaacgagcgaatgctgaatgtcatccgtcagatctccaggccgtca
gccgcaggcatcagcctcatggcggccaacacaaggttcggagatggtcctcgccccccc
aaaatgcctcgctacgacaacggaggtggcttcagaggctggggaggttccctgcgtggc
tccggctacagaggcagagggtacggcgggtacggctggcgcggggggggccgggggtcc
catggtggcccggggggaggttacagaggtgggggaggctatcgaggaggaggggggtat
cgtggagctggtggtggctatagaggaggctgcggggatgtggggaggggcaggtggtag
DBGET
integrated database retrieval system
