Rissa tridactyla (black-legged kittiwake): 128913608
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Entry
128913608 CDS
T09443
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128913608 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128913608 (SMCR8)
Membrane trafficking [BR:
rtd04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
128913608 (SMCR8)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
128913608
NCBI-ProteinID:
XP_054067493
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All DBs
Position
8:5683613..5691776
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AA seq
935 aa
AA seq
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MISAPDVVAFTREEELEDELCSEPPLPEEYSVPLFPFASHGANPWAKVASSKFTRDFILI
SEFSEQVGPQPLLTIPDDAKVSGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADEHKIMQQFQELSAEFSKAS
ECLKTGNRKAFANELEKKLKDLDYTRTVLHNETEIQKKANDKGYYTTQAIEKANELASVE
KSIIEHQDLLKQIRSYPYRKLKRSDFHPYEPEGALDQANAGCDQDLTTSDLADPGETQLY
AHVPSYTPKLIKAKSAKCFDKKLKTLEELCDIYFFTQTLDQLHQIERTFRGDVCYLLTDQ
ISRALLKQQSVTNFLFEDVSFLDEKPPEKQYRGCQGLSQDAVDRKCSEESPAPKVVISLG
SYKSSVECVPIKMEQEIEDPEEPKMTESIMFEHQENLDYLDADIKGSISSGESIEVLGTE
KSASGLTKSESQASLPVSPSPQVGRSKVGSRRTVSEDSIEVLSTCPSESLIPEDFKASYP
SAINEEPYVDDEEGGLHFTPKLNPDNADEQEDISKRENLVQVDSACCIGKESPNFLEPLP
DLGQKPCNEDGVVRIPPQPYRQVEPGLRGSFGSFPSHDGISGGLLPYELDSRYLTGSREV
SKSSLDECSDSTSYISSAASTCSDRTPSPAHLACQASERHKKKAGQNALRFIRQYPFAHP
AIYSLLSGRTLIVLGEEEAIVKKLVTALSIFVPNCGIYAKPVKHWVTSPLHVVDFQKWKL
IGLQRMVSPAGVNMLHTLSRYSRYVSILDADSKTLRCPLYKGTLVSRLADHRTQIKRGST
YYMHVQSILTQLCSKAFLFTFCHHLHLPISEREPEESVVNRRMNFLKLQLGLANEDIKIV
QYLAELLKLQYIQEPGQGVNPLLRFDYVPSFLYKI
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgatgtggtggccttcaccagggaggaggagctggaggatgagctg
tgcagcgagccccccctgcccgaggagtactcggtgccgctcttccccttcgccagccac
ggcgccaacccctgggccaaggtcgccagctccaagttcacccgggacttcatcctcatc
tctgagttctcggagcaagtggggccccagcccctcctgaccatccccgatgacgccaaa
gtgtcgggcactttcgatctcaattatttctcccttcggatcatgtctgtggattaccag
gcttccttcgtggggcaccctcccggctccgcctacccaaagctgaactttgtggaggac
tccaaagtggtgctgggggactcgaaggaaggggccttcgcgtacgtgcaccatttgact
ctctatgacctcgaagccaggggtttcgtgaggcccttctgcatggcctacatttctgcc
gacgagcacaaaatcatgcagcagtttcaggaactctctgcagagttctccaaagcctcc
gaatgcctaaagacggggaacaggaaggcttttgctaatgaactggaaaagaaactgaaa
gatcttgactacaccaggactgtcctgcacaacgaaactgagatacagaagaaagcaaac
gacaaaggttattacacaacccaagccatcgagaaggccaatgagctggccagtgtggaa
aagtctatcatcgagcaccaagatctgctgaaacaaatcaggtcatatccctataggaag
ctgaagaggtccgacttccacccctatgagccagagggtgcgctggatcaggccaacgca
ggctgcgaccaggacctgactacctctgaccttgctgatcctggtgaaacgcaactttat
gcccatgtgccatcctatacacccaagctcatcaaagcgaagtctgccaaatgctttgac
aagaagctgaagacgctggaggagctctgcgatatttattttttcacccaaacccttgac
cagttgcatcagatcgagaggactttcagaggtgatgtgtgctacctcctgacagaccag
atcagcagggcgctcttaaagcaacaaagcgtaactaacttcctctttgaggatgtgtct
tttctggatgaaaaaccacctgaaaaacagtacagaggctgccaggggctcagtcaagat
gccgtcgatagaaagtgctcagaagagtctcctgctcctaaagtggtcatcagcctggga
tcctacaagtccagcgtggagtgtgtgcccatcaagatggaacaggaaatcgaggacccc
gaagaacccaaaatgactgagtccatcatgtttgaacaccaggagaacctggactatctc
gatgcagatattaaaggcagcatcagtagtggtgagagcatcgaggttcttggaacagag
aagtctgcatctggcttgacaaaatcggagagccaggccagcctacctgtcagccccagt
ccccaggtgggcaggagcaaggtgggcagccggcggaccgtcagtgaggacagcatcgag
gttctcagcacatgtccctccgagtcgctcatcccggaagatttcaaagcaagctaccca
agtgccattaacgaggaaccttacgtggatgatgaagagggaggccttcatttcaccccc
aaactaaatccggacaacgccgacgagcaggaagacatttcaaaacgggaaaacttagtg
caggttgattctgcctgttgtatcgggaaggagagtcccaacttccttgagcctctgcct
gacctgggacagaaaccctgcaatgaggatggggtggtcaggattcccccgcagccgtac
cggcaggtcgagccggggctgcgtggcagcttcgggagcttcccctcccatgacggcatc
tcgggggggctccttccctacgagcttgactcgcgctacctgacaggcagcagggaggtc
agtaagagcagtctggacgagtgctcggactccacgagctatatcagcagcgccgcctcc
acgtgctctgacaggaccccttctcctgctcacctcgcctgtcaggcgagcgaaaggcac
aaaaaaaaggctggccagaacgcgctgcggttcatcaggcagtaccccttcgctcacccc
gccatctactccctgctcagcgggaggaccctcatcgtgctgggggaagaggaagccata
gtcaaaaagcttgtgacggcgctctccattttcgtgccgaactgcggcatttacgccaag
cccgtgaagcactgggtcacttcccctctgcacgttgtggatttccagaagtggaagctg
atcggactccagaggatggtgtcacctgccggggtgaacatgctgcacaccctgagccga
tacagccggtacgtcagcattctggatgccgacagtaagactctccgctgcccgctttac
aaaggcaccttggtgtcccggctggcagaccaccgcacgcagatcaaacgaggaagcacc
tactatatgcacgtccaaagtatcctcacccagctgtgttcaaaagccttcctcttcacc
ttctgccatcatttgcaccttcccatcagtgaaagggaaccggaggaatccgtggtgaat
cgcaggatgaactttttgaagcttcagctgggcctcgccaatgaagatatcaaaattgta
cagtatttagctgagctgctgaagctgcagtacattcaggaacccggccagggggtgaac
cctctgctcagatttgactatgttcccagctttttgtacaaaatctag
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