Rissa tridactyla (black-legged kittiwake): 128915049
Help
Entry
128915049 CDS
T09443
Name
(RefSeq) actin, cytoplasmic type 5 isoform X1
KO
K05692
actin beta/gamma 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03082
ATP-dependent chromatin remodeling
rtd04145
Phagosome
rtd04210
Apoptosis
rtd04510
Focal adhesion
rtd04520
Adherens junction
rtd04530
Tight junction
rtd04810
Regulation of actin cytoskeleton
rtd04814
Motor proteins
rtd04820
Cytoskeleton in muscle cells
rtd05100
Bacterial invasion of epithelial cells
rtd05132
Salmonella infection
rtd05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128915049
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128915049
09143 Cell growth and death
04210 Apoptosis
128915049
09144 Cellular community - eukaryotes
04510 Focal adhesion
128915049
04520 Adherens junction
128915049
04530 Tight junction
128915049
09142 Cell motility
04814 Motor proteins
128915049
04820 Cytoskeleton in muscle cells
128915049
04810 Regulation of actin cytoskeleton
128915049
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
128915049
09171 Infectious disease: bacterial
05132 Salmonella infection
128915049
05100 Bacterial invasion of epithelial cells
128915049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtd03021
]
128915049
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128915049
03036 Chromosome and associated proteins [BR:
rtd03036
]
128915049
03029 Mitochondrial biogenesis [BR:
rtd03029
]
128915049
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtd04812
]
128915049
04147 Exosome [BR:
rtd04147
]
128915049
Transcription machinery [BR:
rtd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128915049
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
128915049
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
128915049
NuA4 complex
128915049
Chromatin remodeling factors
BAF complex
128915049
PBAF complex
128915049
GBAF(ncBAF) complex
128915049
SWR1 complex
128915049
Mitochondrial biogenesis [BR:
rtd03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
128915049
Cytoskeleton proteins [BR:
rtd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
128915049
Exosome [BR:
rtd04147
]
Exosomal proteins
Proteins found in most exosomes
128915049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
128915049
NCBI-ProteinID:
XP_054070818
LinkDB
All DBs
Position
9:complement(24138434..24140747)
Genome browser
AA seq
389 aa
AA seq
DB search
MAGSFFVPSGPVSMADEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY
EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE
MATAASSSSLEKSYELPDGQVITIGNERFRCPEAIFQPSFLGMESCGIHETTFNSIMKCD
VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL
ASLSTFQQMWISKQEYDESGPSIVHRKCF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcagggtccttctttgttccctcaggcccggtcagcatggctgatgaggagattgct
gcccttgtggtggacaatggctctggcatgtgcaaggcaggctttgcaggggatgatgcc
ccccgtgctgtgttcccctccattgtgggacgcccccggcatcagggtgtcatggtgggc
atggggcagaaggacagctatgtgggggatgaggcgcagagcaagagaggcatcctcacc
ctgaagtaccccatcgagcacggcattgtcaccaactgggatgacatggagaagatatgg
caccacaccttctacaacgagctgcgtgttgccccagaggagcaccctgtcctgctcacc
gaggcccccctgaaccccaaggccaaccgggagaagatgacccagatcatgtttgagacc
ttcaacaccccagctatgtatgttgccatccaggctgtgctgtccctctatgcctctggc
cgtaccactggcatagtcatggactctggggatggtgtcacccacaccgtgcccatctat
gaaggctacgcgctgccccatgccatcctgcgtctagacttggctggtcgtgacctgact
gactacctcatgaagatccttacagagcggggctacagcttcaccaccacggccgagaga
gagattgtgcgggacatcaaggagaagctctgctatgttgctctggactttgagcaggag
atggccacagctgcctcatcttcctccctggagaagagctatgagctgccagatgggcag
gtgatcaccattgggaatgagcgtttccgatgccctgaggccatcttccagccttctttc
ctgggcatggagtcctgtggcatccatgagaccaccttcaactccatcatgaagtgtgac
gtggacatcaggaaggacctgtacgccaatactgtgctctctggtggtaccaccatgtac
cctggcatcgctgacaggatgcagaaggaaatcaccgccctggcacccagcaccatgaag
atcaagatcattgccccaccggagcgcaaatactctgtctggattggggggtccatcttg
gcctctctctccaccttccagcagatgtggatcagcaagcaggagtatgatgagtctggc
ccctccattgtccatcgcaaatgcttctag
DBGET
integrated database retrieval system
