Rissa tridactyla (black-legged kittiwake): 128915618
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Entry
128915618 CDS
T09443
Symbol
SMPD1
Name
(RefSeq) LOW QUALITY PROTEIN: sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00600
Sphingolipid metabolism
rtd01100
Metabolic pathways
rtd04142
Lysosome
rtd04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
128915618 (SMPD1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128915618 (SMPD1)
09143 Cell growth and death
04217 Necroptosis
128915618 (SMPD1)
Enzymes [BR:
rtd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
128915618 (SMPD1)
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Motif
Pfam:
Metallophos
ASMase_C
Motif
Other DBs
NCBI-GeneID:
128915618
NCBI-ProteinID:
XP_054072241
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Position
1:complement(12201779..12205526)
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AA seq
598 aa
AA seq
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MAARAQGPGPAPPLALALALALSVSLSLSLSVSSSGPPPAEVGAEALLAAAPRWGWRNVS
CPACRLLFGALDLALQLEPNVARVGRLASRLCQELRLARPPVCRQAVQLFQRDVVSAWAR
SVLRPGEACGLLLGRGCGRWDIFGAWNVSLPAAPKPPVRPPQPPAPGAPTARILFLTDLH
WDRRYVPGSPAACPDPLCCRGDAGHGPGGAGFWGEYGKCDLPLHTIEDLLAQLPDPATFA
AVYWTGDIPAHDVWQQSRQDQLLALRTVTGLLRRHLGHLPVYPAVGNHEATPVNAFPPPY
VRGNQSSAWLYDAMAQAWQGWLPPPALQTLRAGGFYTVGVWPGLRLVSLNMNFCSQANFW
LLINATDPAGQLQWLVGVLADAERAGDKVHIIGHIPPAHXLRSWSWNYYRIVSRFEGTIA
GQFFGHTHVDEFEMFYDEETLSRPVSVAFVAPSVTTYINLNPGYRVYEVDGAYPGSSHAV
LDHETFILNLTEANAPGAAPRWRSLYRAREAYGLPTAFPADWDRLIRRFQDDEPLFQRFW
FHLHKGHPPRQPCLAPCKAALLCALRTGRSADPQLCRPLRPALPFPQIQELWRQRRLC
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggcgcagggccccggcccggccccgccgctggcgctggccctggcgctg
gcgctgtcggtgtcgctgtcgctgtcgctgtcggtgtcgtcgtcggggccgccgcctgcc
gaggtcggggccgaggcgctgctggcggcggccccgcgctgggggtggcggaacgtgtcg
tgcccggcgtgtcggctgctcttcggggcgctggacctggcgctgcagctggagcccaac
gtggcgcgcgtggggcgcctggcgtcgcggctgtgccaggagctgcgcctggcgcggccg
cccgtgtgccggcaggccgtgcagctcttccagcgcgacgtggtgtcggcctgggcgcgt
tcggtgctgcggcccggcgaggcctgcgggttgctgctgggccggggctgcggccgctgg
gacatcttcggcgcctggaacgtctccctgcccgccgcccccaagccgccggtgcggccc
ccgcagccccccgcgcccggcgcccccaccgcccgcatcctcttcctcaccgacctgcac
tgggaccgccgctacgtgccgggcagtccggccgcctgccccgacccgctctgctgccgc
ggcgatgccggacacggccccggcggtgccggcttctggggggagtacggcaaatgcgac
ctgccgctgcacaccatcgaggatctgctggcccagttgccagacccggccacctttgcc
gccgtgtactggaccggcgacatcccggcgcatgacgtctggcagcagagccggcaggac
cagctgctggccctgcgcaccgtcaccgggctgctgcgccgacacctgggccacctgccc
gtctacccggctgtgggcaaccacgaggccaccccggtcaacgccttccccccgccatac
gtgcggggcaaccagtcctccgcgtggctctacgatgccatggctcaggcctggcagggc
tggctgccccccccggcgctgcagaccctccgggccggcgggttctacacggtgggggtc
tggccggggctgcgcctcgtctccctcaacatgaacttctgctcccaggccaacttctgg
ctgctcatcaacgccaccgaccccgcggggcagctccagtggctcgtgggggtcctggcc
gacgccgagagggcgggggacaaggtgcacatcatcgggcacatcccccccgcgcacngt
ctgcgcagctggagctggaactactaccgcatcgtcagcaggtttgagggcaccatcgcg
gggcagttcttcggccacacgcacgtggacgagttcgagatgttctacgacgaggagacg
ctgtcgcgccccgtctccgtcgccttcgtggcccccagcgtcaccacctacatcaacctc
aaccccgggtaccgcgtctacgaggtggacggcgcctaccccggcagctcccacgccgtg
ctggaccacgagaccttcatcctcaacctgacggaggccaacgcgccgggggccgcgccg
cgctggcggagcctctaccgggcgcgggaggcctacgggttacccaccgccttccccgcc
gactgggaccggctcatccgccgcttccaggacgacgagccgctcttccagcggttctgg
ttccacctgcacaagggtcaccccccgcgacagccctgcctggcgccctgcaaggccgcc
ctgctctgcgccctgcgcaccggccgctccgccgacccccagctctgccggcccctgcgg
cccgcgctgcccttcccgcagatccaggagctctggcggcagcgacggctctgctga
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