Rissa tridactyla (black-legged kittiwake): 128916102
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Entry
128916102 CDS
T09443
Symbol
SMAD5
Name
(RefSeq) mothers against decapentaplegic homolog 5
KO
K16790
mothers against decapentaplegic homolog 5
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04081
Hormone signaling
rtd04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128916102 (SMAD5)
09133 Signaling molecules and interaction
04081 Hormone signaling
128916102 (SMAD5)
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Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
128916102
NCBI-ProteinID:
XP_054073324
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Position
11:complement(6736066..6765470)
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AA seq
465 aa
AA seq
DB search
MTSMASLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSSPG
QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKE
VCINPYHYKRVESPVLPPVLVPRHSEFNPQHSLLVQFRNLSHNEPHMPHNATFPDSFQQP
NSTPFSISPNSPYPPSPASSTYPSSPASSGPSSPFQLPADTPPPAYMPPDDQMGQDNSQS
MDTSNTMIPQIMPNISTRDVQPVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFT
DPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNC
NYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFVKGW
GAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPLNPISSVS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaatggccagtttgttctcctttactagcccagctgtaaagcgtctgttgggc
tggaaacaaggagatgaagaggaaaaatgggcagaaaaagctgtcgatgctttggtaaaa
aagctgaaaaagaaaaagggtgctatggaagaactggagaaagccttgagcagtccagga
cagcccagcaagtgtgttactattcctcgttctttagatggacgacttcaggtttctcac
agaaaaggccttccccatgtaatttactgtcgtgtttggcgttggcctgatctacaaagc
catcatgagctgaagccattggatatttgtgaatttccttttggatctaaacagaaggaa
gtctgcatcaatccataccactacaagagggtggagagcccagttctacctccagtgtta
gtgcctagacatagtgaattcaatccacagcacagtctactagttcaattcaggaaccta
agccacaatgaaccacacatgccacacaacgcaacatttccagattctttccagcagccc
aacagcactccattttccatttcgccaaacagtccctatccaccttctccagccagcagc
acttacccaagctccccagctagctctggaccatctagtccatttcagctaccagctgat
actccgcctcctgcatatatgccccctgatgatcaaatggggcaggataattctcagtct
atggacacaagcaatacaatgatccctcaaatcatgccaaatatatctaccagagatgtt
cagcccgttgcctatgaagaacccaaacactggtgttcgattgtgtattacgaattaaat
aatcgtgttggggaggcttttcatgcatcttccacaagtgtcttagtagatgggtttaca
gatccctccaataataaaaacaggttctgcttaggtttgctctcaaatgttaatcgcaac
tcaacaattgagaacactagacgacatattggaaaaggagttcatctctactatgttggt
ggggaagtctatgctgagtgtttaagtgatagcagcatatttgtacagagcaggaactgc
aactaccaccacggcttccatccgacaactgtatgcaagattcctagtggatgcagtctg
aaaatttttaacaatcaggagtttgctcagcttttagctcagtctgtcaaccatggattt
gaagcagtatatgagctcaccaaaatgtgcaccattcgaatgagttttgtaaagggatgg
ggagctgaatatcaccgacaagatgtcacgagcaccccatgctggatagaaattcatctt
cacgggcctctccagtggctggataaagtacttacacaaatgggttctcctcttaatccc
atctcatctgtttcatag
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