KEGG   Rissa tridactyla (black-legged kittiwake): 128917342
Entry
128917342         CDS       T09443                                 
Symbol
TRAF2
Name
(RefSeq) TNF receptor-associated factor 2
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04010  MAPK signaling pathway
rtd04137  Mitophagy - animal
rtd04141  Protein processing in endoplasmic reticulum
rtd04210  Apoptosis
rtd04217  Necroptosis
rtd04621  NOD-like receptor signaling pathway
rtd04622  RIG-I-like receptor signaling pathway
rtd04920  Adipocytokine signaling pathway
rtd05132  Salmonella infection
rtd05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    128917342 (TRAF2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    128917342 (TRAF2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    128917342 (TRAF2)
  09143 Cell growth and death
   04210 Apoptosis
    128917342 (TRAF2)
   04217 Necroptosis
    128917342 (TRAF2)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    128917342 (TRAF2)
   04622 RIG-I-like receptor signaling pathway
    128917342 (TRAF2)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    128917342 (TRAF2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128917342 (TRAF2)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128917342 (TRAF2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtd03019]
    128917342 (TRAF2)
   04121 Ubiquitin system [BR:rtd04121]
    128917342 (TRAF2)
Enzymes [BR:rtd01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     128917342 (TRAF2)
Messenger RNA biogenesis [BR:rtd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     128917342 (TRAF2)
Ubiquitin system [BR:rtd04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    128917342 (TRAF2)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_2 Sina_ZnF zf-C3HC4_4 zf-RING_6 zf_C2HC_14 zf-C3HC4_3 zf-TRAF_2 zf-RING_10 Thioredoxin_3 zf-RING_UBOX zf-C3HC4_5
Other DBs
NCBI-GeneID: 128917342
NCBI-ProteinID: XP_054076136
LinkDB
Position
14:12883619..12904487
AA seq 472 aa
MAAANSTPPGSLDLNQPGFAKEILGTKLEVKYLCSNCKNILRRPFQAQCGHRYCSYCLKK
IISAGPQKCASCIQEGIYEEGISILETSSAFPDNAARREVESLPAVCINSGCTWKGTIKE
YEAHDEVCPEFPLTCEGCGKKIPREKFRDHVKTCGRSKVPCRFEVVGCAEVVENEKLPEH
ESKCLAEHLYMLLSFVLSLKAGSGDLKPLPTLSSSQNNSPLLAANSLCSESELSRSLELL
GRCEALERKTVTFENIVCVLNREVERVSLTAEAYSRQHRLDQEKIETLSNKVRQLERSIG
LKDLAMAEMEEKIRNMEASTYDGVFIWKITEFARKRQEAITGRSPAIFSPAFYTSKYGYK
MCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHIIDAFRP
DVTSSSFQRPITEMNIASGCPLFCPVSVMEAKNSYVRDDAIFIKAIVDLTGL
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggcagcagcaaactctactccacctggctctttggatctaaaccagcctggatttgca
aaggagatcctgggaactaagctggaggtcaaatacctctgttccaattgcaagaatata
ttgaggaggccgtttcaagctcagtgtggacatcgctactgttcctattgtctgaagaaa
attataagtgctggacctcaaaagtgtgccagctgtattcaggagggaatatacgaagaa
ggaatttctattttggaaacaagctcggctttcccagacaacgcagctcgccgggaggtg
gaaagtctgcctgctgtctgtattaacagtggctgcacttggaaggggactattaaagaa
tacgaggctcatgacgaagtctgccctgaatttccgctgacttgcgaaggctgtgggaag
aagattcccagggagaagtttcgggaccatgtgaagacttgcggcagatctaaagtgcct
tgcagatttgaggttgtcggatgtgctgaggtggtggaaaatgaaaagctaccagaacat
gaaagcaagtgtttggcggagcatctctacatgctactgagctttgtgctcagcctcaag
gctgggtctggagacctgaagccccttcctaccctttcctcgtcacaaaacaactcccca
ctactggcagcaaactctctgtgctcggagtcagagctctccaggtccctggagctcttg
ggaaggtgtgaggcccttgagaggaaaacagtgacctttgagaacattgtctgcgtgctc
aatcgggaggtggaaagagtgtctctaacagccgaagcctacagtcggcaacatcgacta
gaccaggagaaaatcgaaacactgagtaacaaggtccggcagctggaaaggagcatcggg
ctcaaagatctggccatggctgagatggaggaaaagatccgcaacatggaagcttccacc
tacgacggtgttttcatctggaagataacagaatttgccaggaagcgtcaggaggcaatc
acgggccgctctcctgcgatcttctctccagctttctacacgagcaagtacggctacaag
atgtgtctgcgtgtttacctgaacggggacggcaccgggcgtgggacccatctgtccctg
ttcttcgtggtgatgaaaggacccaacgatgcgcttctgcggtggcccttcaaccagaag
gtaaccctgatgctcctggatcagaacaaccgggagcacatcatcgacgccttccgaccc
gacgtgacgtcctcctcctttcagcgacccatcacggaaatgaacattgccagcggctgc
ccgctgttctgccccgtctccgtgatggaagccaagaactcctacgtgcgtgatgacgcc
atctttattaaagccatcgttgatctcacgggcctctaa

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