Rissa tridactyla (black-legged kittiwake): 128919175
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Entry
128919175 CDS
T09443
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03440
Homologous recombination
rtd03460
Fanconi anemia pathway
rtd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128919175 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
128919175 (BRCA1)
03460 Fanconi anemia pathway
128919175 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtd01009
]
128919175 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128919175 (BRCA1)
03036 Chromosome and associated proteins [BR:
rtd03036
]
128919175 (BRCA1)
03400 DNA repair and recombination proteins [BR:
rtd03400
]
128919175 (BRCA1)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128919175 (BRCA1)
Protein phosphatases and associated proteins [BR:
rtd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128919175 (BRCA1)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128919175 (BRCA1)
Multi subunit type E3
BRCC complex
128919175 (BRCA1)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
128919175 (BRCA1)
DNA repair and recombination proteins [BR:
rtd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
128919175 (BRCA1)
BRCA1-A complex
128919175 (BRCA1)
BRCA1-B complex
128919175 (BRCA1)
BRCA1-C complex
128919175 (BRCA1)
BRCA complex
128919175 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
128919175 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
BRCT_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_6
BRCT_3
zf-Nse
zf-RING_5
zf-RING_10
zf-MIZ
zf-ANAPC11
Zf_2nd_IFT121
RTT107_BRCT_5
zf-RING_4
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
128919175
NCBI-ProteinID:
XP_054080221
LinkDB
All DBs
Position
19:5342207..5367193
Genome browser
AA seq
1866 aa
AA seq
DB search
MDFSVIAIGDVQNVLSAMQKNLECPICLDVVKEPVSTKCDHIFCRFCMFKLLSKKKKGVT
QCPLCKTEVTKRSLKENSRFKQLIEGLLETIHAFELDTGVKFLNSHHFPKTSTEATVAEF
LCKESSVIQSKGFRNRKKNAKENGQENCTLREANVDTRLTDTRVKRCSLRNKTQKCASEK
GVYIEFGSDSSEELFKQASNTGLEDKEALQISSQEKLEELKSAEKGNEHSCNTQPDKLGA
EEVILPNVRGESDSSKEGLSKKSTRSITEYAKPGQVNMTEYRSSPLNVLAVDLLTEQCDR
IGNASPLSNGDTSFFKHTEEMAAEQTQCNTESKEFDLKDSSKSRLDKSKEIDTVVQSVEA
VEMHEPENDSAHEKEPPLEKLLQPETLHCATVNQVSRKRLKRSIQKVNEWFSKSNETLSS
SSSQDDSAGATDVSGEGDTCLSDKDSCISEKTDPMVDSVEIAVVEGNKRRSKQTADSIKD
KIFGKTYKRERRSNAPIILRDILPTTKKEEVMVDKKCLNNSSKGGLKRKRKTARVLQPED
FIQKKDTEEAGGCPQSVNRCLEDAEKKRCDESSAVSESHFSENGEDNAPAETEEGGGGSI
WKKATEKVTGKHCDRELELNSSDQKSTKKSSAAKKCRRSTRTMCALQLVVDRNSVSPDPG
EPQIDSYPSSEEPRKADSEQRQVRRSRRLQLLSEEITKETGKGVVIKGARKYDSDQEEFF
KVQRNVLVPTSECKDPCEPQGTLSYKPLTDLKGGDLEANEVQVSLKNSSDTTETGKSFFN
PTSSCQRSNYSSFAPDAGSQGGEILDSCSLLQPPSVTVVQTASHPTEEMPESGTTFPQDS
GHDKQNVPGEFGTEKLPMAKNVLELTKEAEDSELDTQYLRNIFRHSKRQSFSLYPTPTKV
CAVEDATSESLKIPCTDQVENKHDKYLKAENLQEKKTTAESLSRVCEKEELKTYESACVS
PVTCFVDSTECAHTGEHQEDVSQVANQGNLTPVRIGTARTENKSRSQKGEQGNEKTVSTD
AGIESELRENPIKSNRSRSDQSDTEEHIFKRTDLNTVDKMCFSSESYQAGKAKVVDSRVP
TPHFQPRSMICPAACQQKPAEFTCEVTGEKSSKRERKQVKGNEEQATQTASTGMPECSVM
EALEEPLQGNSDFTGLSETPDGLLCSDDGIEENSFSETDRRERSAVFVKRSDNALVKELH
DRNVNSKPSSQGIQRSRRRARKLQSSDEESSEDEDLPCFQTLIFGKSMSTPLQINKQGTF
VVASSVSPVTLPHSGSHDDNNMQKMPEAALSSGCVSPSQESECSVNLFSSQSNVSEESVD
GAQELKKPLMQGHTSKQVSNENESKETFQSCDGEWKRSKTNFKDECQEDPNMGANLGEAS
GYDSETSNVEDSCGPFSQGEILTTQQKNAMQNNLKKLQQEMAMLEAVLKQHGSQDYEFLP
MHRKLPHSSTEGTLGMEQMGQERGAESASEGNSENLNRRSSKGFSANDFHVMPSDCLNSK
IKELAKERSPELLLPSSKSRLLKRPDSEKGLQCDNVLKNKAPSGKTKPVQEAVPEYNQCQ
LEAENADEQESGTRLNSASVLSNLSGNVTRSPNKSSSSVRLLNPRTAEATSRSVVAQSAK
KSSAEECKSKRSVCFPVPVLQNAAGTDNATSLAVTNRKEMSIVASGLNKSEHLVVQKFAR
KTHSTLCNHITEETTHVIMKTDKELVCERTLKYFLGIAGRKWVVSYQWVIQSFKEGRILD
EENFEVRGDVINGRNHQGPKRARQSLTEKIFKGFEICCYGPFTDMTTEHLEWMVELCGAS
VVKQLHLFTHTANSTAVVVVQPDAWMENTNYRAIQQENNVAMVTREWVLDSVACYECQEL
DAYLVS
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcagtgattgctattggagatgtacaaaatgtgctttcagctatgcagaag
aacttggagtgcccaatatgcttggatgtggtaaaagagcctgtttcgacaaaatgtgat
cacatattctgcaggttctgcatgttcaaactcctcagcaaaaagaaaaaaggtgtgaca
cagtgtcctctgtgtaagactgaagttaccaagagaagtctgaaagaaaattccagattt
aagcaactaattgaaggattgttggaaactatccatgcgtttgagcttgacactggagta
aaatttttaaacagtcatcactttcctaaaacatccacagaagccactgttgctgagttc
ctctgtaaagaaagttcagtcatccaaagcaagggtttcagaaacaggaaaaaaaatgct
aaggaaaatggacaagaaaactgcaccttgcgggaagctaatgtggatacacggcttaca
gataccagggtcaaaaggtgttccctgagaaacaaaacccagaaatgcgcctctgaaaaa
ggggtttatatagagtttggttctgattcatctgaagagctttttaaacaggcaagcaat
actgggttagaagacaaagaagcacttcagatttcatctcaagaaaagctagaagaactt
aagagtgctgagaaggggaatgaacattcttgcaatacacagcctgacaagctgggtgct
gaagaagtaattctaccaaatgtcagaggtgaaagtgattcctcaaaggaaggcttgagc
aagaaaagcactcggagcatcactgaatatgccaaacctggccaagtgaatatgactgaa
taccggagttctcctttaaatgttcttgctgtagacctactcacagagcagtgtgacaga
ataggtaatgccagtcccttaagcaacggggacacatctttctttaagcacacagaagaa
atggctgcagagcaaactcagtgcaatactgaaagcaaagagtttgacttaaaagatagc
tcaaagagcaggttggataaaagcaaggaaatagatactgttgtacaaagtgtggaagct
gtggaaatgcacgaacctgagaatgattctgcccatgaaaaagaacctcctctggagaaa
ctacttcagccggagacacttcactgtgctaccgtgaatcaagtctctaggaagagactg
aagcgaagcattcagaaagtcaatgaatggttttcaaaaagcaacgagactctgtcttcc
agttcttcccaggatgattctgctggagcaactgatgtttcaggtgaaggagatacatgt
ttatcagataaagattcctgtatttcagaaaagactgaccctatggtagactctgtggaa
attgcagtggttgaaggaaacaagagaaggtcaaaacaaacagcagatagcatcaaagac
aaaatatttgggaaaacatacaagagagagaggaggtcaaatgcccctattatcttgaga
gacattttacctactacaaaaaaggaagaagtgatggttgataagaaatgcttgaataat
tctagtaaaggcggactaaaacgaaaaaggaagactgcccgtgtcctgcaacctgaagat
ttcattcagaaaaaagatacagaagaggcaggtgggtgccctcaaagtgttaaccggtgc
cttgaagatgctgaaaagaaaagatgtgatgaaagttctgctgttagtgagagtcacttc
tctgagaatggagaggataatgcaccagcagaaacggaggaaggaggaggaggatccata
tggaaaaaagctactgaaaaggtgactggcaagcactgtgacagggaactagaactgaat
agctctgatcagaaaagcactaaaaaaagttctgcagcaaaaaaatgcaggcgttctact
agaaccatgtgtgctctgcagttagtagtggatagaaattctgtttcccctgatccaggt
gagccacagattgatagctatccaagcagcgaagaaccaaggaaagctgattctgagcaa
agacaagtcaggcgcagcaggaggcttcagttactttctgaagaaattacaaaagaaaca
ggaaaaggagtagtaattaaaggagcaagaaagtatgacagtgatcaggaagagttcttt
aaagtccaaagaaatgtgttagttcccacttctgaatgcaaagacccgtgtgagccccag
ggtacgttaagttacaagccactcactgatctgaagggtggtgatctggaagcaaatgaa
gtacaggttagtctaaagaattcatctgacaccacagaaactggaaaaagtttcttcaat
cctacatcttcatgtcagcgttcaaactatagttcctttgcacctgatgcaggttctcaa
ggaggcgaaatacttgatagctgttccctcctacagcctccttcagtgactgtcgtgcaa
actgcttcccacccgactgaagagatgcccgaatcaggtactactttcccccaggatagc
ggacatgataaacaaaatgttccaggggaattcggaactgaaaagttgccaatggctaaa
aatgttttggaattgacgaaggaagctgaagatagtgagttagacacacagtatctgcga
aatatatttaggcattcaaaacgccaatcatttagcctttatcctacacccacaaaagtg
tgtgcagtagaagatgccacttctgaatctttaaagataccatgtactgatcaggtagaa
aataagcacgacaaatatttaaaagcagaaaacttgcaagaaaagaaaacaactgctgaa
agcttgagtagggtttgtgagaaagaggagcttaagacctatgaatctgcttgtgttagt
cctgtgacttgctttgtcgacagtactgaatgtgcgcacacaggggaacatcaagaagat
gtttcacaggttgcgaatcaagggaatctgacgccagtaagaattggtactgctaggact
gaaaacaaaagcagatcacaaaaaggagaacagggaaatgaaaagacagtgtcaactgac
gcaggaatagaaagcgagctgagagagaatccaatcaaaagtaacagaagccgaagtgat
cagagtgatacagaagagcacattttcaaaagaactgatttaaacacagtcgataaaatg
tgcttcagttcagaaagctatcaagcaggaaaagccaaagttgttgacagcagagtacca
acaccacattttcagcccagatcaatgatttgtcctgcagcttgtcagcaaaagcctgct
gaattcacctgtgaagtcactggggaaaaaagtagcaaaagagaaagaaaacaagtaaag
gggaatgaggaacaagcaacccaaactgctagcacagggatgcctgagtgttcagtcatg
gaggctctagaggaaccccttcaagggaacagtgattttacaggtttgtctgaaaccccc
gatggcttactgtgctctgatgacggtattgaagagaacagcttttctgaaaccgatagg
agagagagatctgctgtgtttgtaaaaagaagtgacaatgccctggtaaaagaactgcac
gatagaaatgttaattctaagccaagttctcaaggtattcaaagatctcgaagaagagcg
cgaaaattgcaatcttcagatgaagaatctagtgaggatgaagatttaccatgttttcaa
actttaatatttggcaaatcgatgagcacacctttgcagatcaataaacaagggacattt
gtggtagcgtcctcagtaagtcctgtcacattgcctcacagtggaagtcatgatgacaat
aatatgcagaaaatgcctgaagctgccctaagtagtgggtgtgtttcaccaagccaggag
tcagaatgctctgtcaacttgttttcttcccagtccaatgtgtctgaagaatcagttgat
ggagcacaagaactcaagaaacctttaatgcaaggtcatacatccaaacaagtgagcaat
gagaatgagagtaaagaaacttttcaaagttgtgatggagagtggaagagaagcaaaact
aacttcaaagatgaatgccaggaagacccaaacatgggagccaacctaggtgaagcatct
ggatatgacagtgaaacaagtaatgtagaagattcatgtggaccgttctctcagggtgaa
atccttacgactcagcagaagaatgctatgcaaaataatctaaaaaaacttcagcaagaa
atggctatgcttgaagcagtgctgaagcagcatggaagtcaggactatgaatttctacct
atgcataggaaactgccacattccagtactgaaggaacacttggaatggaacaaatggga
caagaaagaggggcagaatcagcctcagaaggaaattctgaaaatcttaatcgcagaagt
tcaaagggattttcagccaatgatttccatgttatgccaagtgattgtctcaacagtaaa
atcaaagagttagcaaaagaaaggtctccagaattgttgcttccatcttctaaatcccgt
ttgttaaagagaccagattcggagaaaggccttcagtgtgacaatgttctgaagaacaaa
gctccttctggaaagacaaaacctgtgcaggaagcagtgccagaatataatcagtgtcag
cttgaagcagaaaatgcagatgagcaagaatctgggaccaggctaaacagtgcatctgtc
ttatcaaatctctctggaaatgtgaccaggagtccaaataagtcttcctcttctgtaagg
cttcttaatcctcggactgcggaagcaacgagtcgttctgttgtagctcagagtgctaag
aaaagctctgctgaggaatgtaaatcaaagagaagtgtgtgttttcctgtacctgttctg
caaaatgcagctgggacagacaatgctacaagtctagctgtgactaacaggaaagaaatg
tcaattgtggcatcagggctgaataaaagtgaacatttggtggtccagaagtttgccaga
aaaactcacagcactttatgtaaccacattactgaagaaacaacccatgtcataatgaaa
acagataaggagctcgtgtgtgaacggacactgaagtactttctgggtattgcaggaaga
aaatgggtagttagttatcagtgggtaattcagtcttttaaagaaggaaggatactggat
gaggagaactttgaagttagaggagacgtaatcaatgggagaaaccaccaaggtcccaag
agggctagacagtctctaactgaaaagatctttaaaggctttgagatctgctgctatgga
cctttcactgatatgactacagaacatctagaatggatggtggagctttgtggtgcctct
gtagtgaagcagcttcatctgttcacgcacacagccaattctactgctgtcgtggttgtg
cagccagatgcttggatggaaaacacgaattacagagcaatccagcaagagaacaatgtt
gccatggtgactcgggagtgggtattagacagcgttgcctgctatgagtgccaggagttg
gatgcttaccttgtgtcctaa
DBGET
integrated database retrieval system
