Rissa tridactyla (black-legged kittiwake): 128919216
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Entry
128919216 CDS
T09443
Symbol
PLEKHM1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04140
Autophagy - animal
rtd05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128919216 (PLEKHM1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128919216 (PLEKHM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128919216 (PLEKHM1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtd04990
]
128919216 (PLEKHM1)
Membrane trafficking [BR:
rtd04131
]
SNARE
SNARE associated proteins
Others
128919216 (PLEKHM1)
Domain-containing proteins not elsewhere classified [BR:
rtd04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
128919216 (PLEKHM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Zn_ribbon_RRN7
zf-C3H2C3
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
128919216
NCBI-ProteinID:
XP_054080367
LinkDB
All DBs
Position
19:complement(3145285..3169558)
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AA seq
1049 aa
AA seq
DB search
MHSSHTDDPKEAIQLIKKQLVNAIKALQKQYVTSDAVVTSDDGNANTLCSALEAVFVHGL
KAKHIKAESGGKGKKAGGRGPLPQPVFWGLLKSITHRNIVSELEQLIFINTDVGRCRAWL
RLALNDGLVECYLQLLLRERSRLPEYYQATALLLDTEECEFLLSYLQGLTSLTFELSYKS
AVLNEWTITPLSLSGLCPVSELLEPLPSSTSEPRRKASLGSISQSSGSDEIEIQPSVLPI
GKAGSKTKLTSSSLSLNTTSSSQLSSSLGSDSILPSARSPERSEEPLSCDSDLGTATAED
LDRSLQEVLSEFSKAKPSLEAPERGLVPSVLGCSPRPPACAPAPSPLAQSSTAHPPPPPD
TDGPRSARTGHAVTASDGDGDAAPQAGVAAGVLATRRGGPSGGETGRSGAVSSSETSQAV
RSPTADYLLSPLLGCPKRKSWISEDDFYRPSPGDSGESTADTNGFGPEGAGEAPAPGLIS
ALDLERLSVPSSESGKPKMSPEREQKGFSVVHRRQMGLSNPFRGLLKLGSLERRGAMGIW
KEFSCELSPLELRLFLDHEDRICVESYSLLRCESLALTHSDGHFELVFLGKKLYLRAPSR
DEAEDWLDRIREALQKCRPQLEEEEWETLEYPEDGGEGQPGQSDSSALLQYSNVPGNGFD
WTPAHEPELDAIKEAVLYVDVDKTWVPFIFSLSLETLKCFKVRNNDKILSNSYGIETIQD
ILPDTSLGGPAFFKVITSKAVLKLQAENAEEAASWRELVRGVLMSYLESAEEALTLGGSL
DGHSQVVLKNIVKENGFLLQYLVAIPMEKGLDSQSFICAGCSRQIGFSFAKPKLCAFSGL
YYCDSCHRDEETVIPSRLIHNWDLTKRGVCRQALKFLNQIRNQPLIDLKLVNESLYDHVE
RMGRIRRSREQLKLLGDYLIMCRSGALKELSKRLDHRHYLLECPHKYSIADLRQIADGVF
ETFLQSLLQFASHHVYNCDLCTQRGFICQICNSNDIIFPFEFDTTTRCSKCKTVFHRDCQ
ARAKSCPRCERRQRYRRKLEGEASAEASP
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgcattcgagccacactgatgaccccaaggaagccatacagctgatcaagaagcagctg
gtgaacgccatcaaggcgttgcagaagcagtacgtgacctcggacgccgtcgtcaccagc
gacgatgggaacgccaacaccctctgcagcgccctggaagccgtcttcgtgcacgggctg
aaggcgaagcacatcaaggcagagagcggggggaaagggaagaaagcagggggtcgggga
ccgcttccccagccggtcttctggggtctgctgaagagcatcacccaccgaaatatcgtc
tcggaactggaacaacttatctttatcaatactgacgtcggccgctgccgagcctggcta
cggctggctttgaacgatggcctcgtggaatgttacttgcagctgctcctgcgggagaga
tcccggctgcccgaatactaccaggccaccgctctgctcctagacaccgaagagtgcgag
tttctccttagctacttgcaaggcttaacatccttaaccttcgagctttcctataaatcg
gcggttttgaacgagtggactatcacgcctctgtccctgtcgggtctgtgtcccgtttcg
gagctgctggaacccctcccgtcctcgacatccgaaccccgcagaaaagcctcgctgggt
tcaatctctcaatcgtcgggatcggacgagatcgagatccaaccctccgtcctacccatc
ggcaaagccggcagcaaaaccaagctcacgtcgtcctcgttgagccttaacaccacgagc
tcgtcccagctctcctccagcctgggctccgacagcatcctccccagcgcccgcagtccc
gagcggagcgaggagccgctctcctgcgactccgacctgggcacggccaccgccgaggac
ctggacaggtcgctgcaagaggtgttgtccgagttcagcaaagccaagccaagcctggaa
gccccggagcgggggctggtccccagcgtgctgggctgctccccacggccgcccgcctgc
gccccggcccccagccccctggcacagtccagcacagctcaccccccaccgcctcccgac
accgacgggccacgctccgctcggacgggccacgccgtgaccgccagtgatggggatgga
gatgcagcaccgcaagctggtgtcgcggccggtgttctggccacgcggcgtggtggtccg
agcggaggagagacaggcagaagcggcgccgtcagcagcagcgagacaagccaggccgtc
cgcagccccacggccgactacctcctttctccgctgctgggttgcccgaaaagaaagagc
tggatctcggaagatgatttctacagaccttctccgggagacagcggcgaaagcacggcc
gacaccaatggctttgggccggagggggctggcgaggctccggccccggggctcattagc
gctcttgatttggaaaggctgtcggtgccctcctcggagagcgggaagcccaaaatgtcg
cctgaacgggaacaaaagggtttcagcgttgtgcaccgcaggcagatgggtctttccaac
cctttccgagggctgctgaagctgggcagcctggagcggagaggagccatggggatatgg
aaggagttttcctgcgagctgtcgccgctggagctccggcttttcctggaccacgaggac
cgcatctgtgtcgagagctattccctgctgcggtgcgagtcgctggcgctgacgcactcg
gacggccatttcgagctggttttcctggggaaaaaactctacctccgagctccttctcga
gacgaggccgaggactggttggacaggatccgcgaggcgctgcagaagtgccggcctcag
ctggaggaggaggagtgggagacgctggagtatccagaagacggtggcgaaggccagccc
ggccagagcgactcctctgctcttctccagtacagcaacgtgcctgggaacggctttgac
tggactccggctcacgaaccggagctggatgccataaaagaggctgttctgtatgtggac
gtagacaaaacttgggtcccttttattttttccctgtctctagaaactttaaagtgcttt
aaagtcagaaacaacgataaaattttaagcaacagttatggtatagagaccatccaggac
atccttccggacacgagccttgggggacccgcgttcttcaaggtgatcacctccaaagct
gtcctgaagctgcaggctgagaacgcggaagaagcggcctcatggagggagctggtccgt
ggggtgctcatgtcctacctggagagcgccgaggaggcgctgacgctgggtggcagcttg
gacggacactcccaagtcgtcttgaagaacatcgtgaaggagaacggcttcttgttgcaa
tacctggtggccatccccatggagaagggcctggactcgcagagcttcatctgtgcaggc
tgctccaggcagatcggcttctccttcgccaagcccaagctctgcgccttctccggtctc
tactactgcgacagctgccaccgggacgaggagacagtcattccctcgcgcctcatccac
aactgggatctgacgaaacgaggggtttgccgccaggctttgaagttcctcaaccagatc
cgtaaccaacccctgatcgacctgaagttggtcaacgagagtctctacgaccacgtggag
aggatgggacggatccgccggagcagggaacagctgaagctactgggagattatctcatc
atgtgccgcagtggggccctgaaggagctgagcaagcggctcgaccacaggcactacctc
ctggagtgtccccacaagtacagcatcgctgatctgaggcagatagccgacggcgtcttt
gagaccttcctgcagtcgctgctccagtttgcttcccatcacgtctacaactgcgacctc
tgcacccagcgcggcttcatctgccagatctgcaacagcaacgacatcatttttcccttc
gagtttgacactaccaccaggtgcagcaaatgcaaaaccgtcttccaccgggactgccaa
gcccgggccaagtcgtgcccgcgctgcgagcgccggcagaggtaccggcgaaagctggag
ggggaggccagcgcggaggccagcccttag
DBGET
integrated database retrieval system
