Rana temporaria (common frog): 120909275
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Entry
120909275 CDS
T07929
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120909275 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120909275 (KDM2A)
04121 Ubiquitin system [BR:
rtem04121
]
120909275 (KDM2A)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120909275 (KDM2A)
Enzymes [BR:
rtem01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
120909275 (KDM2A)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
120909275 (KDM2A)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120909275 (KDM2A)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
120909275 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
120909275 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
SR-25
Cupin_8
PHD
LRR_6
LRR_At5g56370
YL1
Cupin_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
120909275
NCBI-ProteinID:
XP_040176946
LinkDB
All DBs
Position
8:158523883..158689833
Genome browser
AA seq
1158 aa
AA seq
DB search
MEDEQVRYSRRLRSTRRRRYEDDGISDEEIEGKRTFDLEEKLRSQKYNSNFIIFMEGKDF
NMRYIQQGGLRDPLIFKSSEGLGIRMPDPDFSVNDVKLFVGSKRIVDVMDVGTQIGIEMT
MAQWAKYYETPDEEREKLYNVISLEFSHTKLENLVQRPATVDQIDWVDNIWPRHLKDKQT
ESTNVIQEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHILRGGKVFWLIPPTDKNLE
MYENWLLSGKQGDIFLGDKVNECQRVELKQGYTFVIPSGWIHAVYTPQDTLVFGGNFLHS
FNIPTQLRIYSVEDRTRVPTKFRYPFYYEMCWYVLERYVFCMTKQSHLTKDFQRESLSMD
LELSGRRRPDTPSSSSSSSSSSSPSSSSSSEYDDSSDQDWEEEEGLRKSDRDRRKAEREL
QRRRERERRQRERERQHREERILLSSFHPSHQPLTPPPPTPPSPTANTPPCLTWFELEGL
LCLVKKLESLPPHRKCLPDGIQDPEALLADVRKLLEEHAHDPPELALTGIPIVQWPKREQ
YKVHLRPKIQFTKPHIMRPAARHAVSTTTRPAGTISGHTAASSGVRRRRVRCRKCQACLQ
RECGTCHYCKDMKKFGGPGRMKQSCMQRQCLAPRLPHSVTCAVCGEVDQTNDSQDYERKL
MECSVCNEIVHPTCLDMDGEGFLSDELPNYWECPKCYESRKHTVGTDQDQVLLHKMSRKK
RKAVDNGDLDPHLSAKVLRPPLVQSPPSPPLLLLPPSPSSGPPTPPPSTPQVREDRAMRR
QLTREKENHPSGREHSEADRGWHRSSYHTVTLQRPPKELSSSSIVPKLQAITPNSRHPIR
PQPPQPPDDYYDDDDDEEEDDDDDEEEEEEDEEGENGLMFGQKKDQLSIQKDVWLSVFQY
LTKKELCVCMRVCKAWYKWGCDKRLWSRIDVSRCKSLVPQALSGIIKRQPVQLDLSWTNV
SKKQLTWLVNRLPALKDLIVAGCSWSAVSALSSSICPLLRTLDLRWAVGIKDGQIRDLLT
PPSEKPGHDARSKLRFLTDLRLSGLDISDVTLRLIIRHCPHLSKLDLSHCPLMSDQSVNL
LSAVGSCTRNSLTHIHLAGCKGVTDESLLYLRRASSLTLIDLRGCKQVSRKACEGFISDL
SVSTLYCLSDDKLIQRIT
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgagcaagtgcgatacagccgtagactgaggagcacacgtcgtcgtcgatat
gaagatgatggcatctcagatgaggagattgagggcaaaagaacttttgacttggaggag
aaacttcgtagccagaagtacaactccaactttatcatcttcatggagggaaaagacttt
aatatgaggtacattcagcaaggcggactcagggacccgctgatatttaaaagttctgaa
ggacttggcatcagaatgccagatcctgactttagtgtgaatgatgtgaagttgtttgta
ggaagcaagcgcattgtagacgtgatggacgtcggcacccaaataggaatagagatgacc
atggcacaatgggcaaaatattatgaaaccccagatgaagaaagagaaaaattatataat
gtaatcagcctggagtttagccacaccaagctggagaatctggtgcaaagacctgcaacg
gtggatcagatagactgggtggacaacatttggccaaggcatttaaaggataaacagact
gaatccaccaacgtcatccaggaaatgcaataccccaaggtgcagaaatactgccttatg
agtgtgcggggctgttacactgatttccacgtggactttggtggcacatctgtatggtac
cacattctcagaggaggcaaggttttctggctaatacctcctacagacaaaaatctggaa
atgtatgagaattggctgttgtcggggaaacaaggcgatatcttcctgggcgataaagtg
aatgaatgccagcgtgtggaattgaaacaaggctacacctttgttattccttcaggttgg
atccatgcagtatacactcctcaggacaccctggtttttggagggaattttctacatagt
ttcaacatccccacgcagcttcggatatacagcgttgaagacagaacaagggtccccaca
aagtttcgctacccattctactatgagatgtgctggtacgtgctggagagatacgtcttc
tgcatgaccaaacaatcgcacctcaccaaggactttcagagggagtcgctgagtatggac
ttggagttaagtggccgccggagaccagatacaccctcttcatcttcatcttcctcctct
tcatcttcaccttcttcttcttcatcctctgaatatgacgactcatcagatcaggattgg
gaggaagaagagggcttaaggaaaagtgacagagacagaaggaaagctgagcgggaactt
cagaggaggagagaaagggaacgacggcagagagagcgggagcgtcagcacagggaggaa
aggatacttctttctagctttcacccctcccaccagcctctcacgccacctccacctact
cctccctcaccaacagccaacacaccgccatgtttaacatggtttgagcttgaaggtcta
ctctgccttgtcaagaagcttgaatctctccccccacataggaagtgcctgcctgatggc
attcaagatccagaagctcttcttgcagatgtccggaagcttctggaagaacacgcacac
gacccacctgagcttgcactcactggaattcccatcgttcagtggcccaagagagagcag
tataaggttcatctacggcccaaaatccagttcaccaaacctcacatcatgcgaccagca
gccagacatgcggtgtccaccactactcggcccgcgggtacaatttctggtcacacggcg
gcatcgtccggtgtccgaaggcggcgggtgaggtgcagaaaatgtcaggcgtgtcttcag
agggagtgtgggacttgccactactgtaaagatatgaagaagtttggtggtccaggccga
atgaagcagtcatgtatgcaaaggcagtgccttgcgcccagattgccccattctgtgacc
tgtgccgtatgtggggaggtggaccagacaaatgactctcaagactatgagcggaagctg
atggagtgctcggtgtgtaacgagatagtacatcctacctgcctagatatggacggtgaa
ggttttttgagtgatgagttaccaaactactgggagtgccccaaatgttacgagagccgc
aagcatacggttggcacggatcaggaccaagtcttgctgcacaaaatgagtcgtaagaaa
cgtaaggctgtggacaacggtgacttggatccccatttatcagccaaagttttgaggcct
ccactggtacagagtcctccatcaccgccactacttctcctcccaccttctccgtcatcg
ggtccaccaacgccgccaccaagcacgccgcaagtccgagaagaccgagccatgcggcgg
caactgaccagggaaaaagagaaccacccgagcgggcgagagcactcagaggctgaccga
ggctggcatcggagctcctaccacaccgtgacactacagcggcccccaaaagagctgagt
agttcttcaattgtccccaagctgcaagccattacaccaaattcccgacatcccatccgc
ccacagcctcctcaaccaccagacgattattatgacgacgatgatgatgaggaggaggac
gatgatgatgatgaggaggaggaggaggaggatgaagaaggggaaaatggccttatgttc
ggacagaagaaagaccagctgtccattcagaaggatgtatggctttctgtcttccagtac
ctcaccaagaaggagctctgtgtgtgtatgagggtctgcaaagcctggtataagtgggga
tgtgacaaacgcctctggtccaggattgatgtcagccgctgcaagtctctggtgcctcag
gccctaagtggcatcattaaaagacaaccagtacagctcgacctgagctggacaaatgta
tccaaaaagcagctaacctggttggtcaaccgattacccgcgctgaaagacctcattgtg
gcgggctgttcgtggtctgcagtgtctgccctcagcagttctatctgtcctctcctacga
acgctggatttacgctgggcagtgggaatcaaagatggacaaatcagagatctgctgaca
ccgccatcagaaaagccaggacacgacgcacgcagcaagcttcgtttcttgactgacctg
aggctctctggtttagacatctctgacgtcacgctgcggttgataattcggcactgtcct
cacttgtctaagctggacctcagtcactgtccgctcatgtcagaccagtctgtcaacctg
ctgtctgctgtgggctcatgcacacgaaactctctcacacacatccacttggcaggttgc
aaaggggtcacagatgagtctctgctctacctacggcgagcctccagcttgacactaatc
gacctacgtggctgcaagcaagtgtctcggaaagcatgtgaggggtttatatcggacctg
tctgtgagcaccttgtactgtctgtcagatgacaagctcatccaaaggatcacctag
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integrated database retrieval system
