Rana temporaria (common frog): 120909824
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Entry
120909824 CDS
T07929
Name
(RefSeq) T-cell surface glycoprotein CD4-like
KO
K06454
T-cell surface glycoprotein CD4
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03250
Viral life cycle - HIV-1
rtem03260
Virion - Human immunodeficiency virus
rtem04060
Cytokine-cytokine receptor interaction
rtem04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120909824
03260 Virion - Human immunodeficiency virus
120909824
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120909824
04514 Cell adhesion molecules
120909824
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
rtem04090
]
120909824
CD molecules [BR:
rtem04090
]
Proteins
120909824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
V-set
I-set
ig
Ig_5
Hum_adeno_E3A
V-set_CD47
DUF4381
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
120909824
NCBI-ProteinID:
XP_040177486
LinkDB
All DBs
Position
8:759096..829066
Genome browser
AA seq
466 aa
AA seq
DB search
MKKGVCVCLLYLQTYLSLASGERFLYKAGDRVTVPCGMNSPGDIEWKKNGTRIIKIEKGK
TILGATKDKTNQQRFSVPDGATKDLQISDIVLIDSGNYSCEEKNKASRTVQVLVLQVDAV
PSVNLLASEDLMLTIKLPPGTSPIVSWRRGQKTIADGPILKKDNVQIEDQGTYKAHVEIG
DGLRKEIDVKIEVSGFSRSPSIVYISDRKRSLLLPWIFNFGVRKTPLEKEVRVLGGNVSF
SSQKIKEMADRGGAGCWEAECDTKISEEQSKDLSFTLTNPKCGPYRMEIHLQLGARKRRL
TREVCVSNVTVSASPAFFSMESNVTLACSVTCLDPEGKLCWGSNLIGQKVCGAPGQRTFT
KNITAVPETLGNWTCNVLIGGNIAAGANLTLEVTLSLFHPSGALFWVTVAVGVVVLLLLA
VIVAVMAARCRRVRRARYRAWLLENLHQQRVCECNGFAPKRLRENV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagggagtctgcgtttgtcttctgtatctgcagacatacctgtccctggcgtcc
ggtgagcggttcctgtataaggcgggtgatcgggtcacagtgccgtgcggcatgaattcc
cccggggacatcgagtggaagaaaaacgggacgcgtataataaagatcgaaaaaggaaaa
accattctcggtgcaacaaaggacaaaacaaaccaacaacgtttcagtgttccggacggc
gctacgaaagacttgcagatctcggatatcgtcctcattgattccggaaattacagctgc
gaggagaagaacaaagcgtcgcggacggtccaagttctggtcctccaagtggatgccgtt
ccttccgtgaacctcctggcctccgaagatctaatgctgaccattaaactccctcctgga
acgtctcccatcgtgtcctggaggaggggccagaagacgatcgccgacgggccgatcctg
aagaaggacaacgtgcagatcgaggaccaagggacctacaaggcccacgtagagatcggc
gacggactgagaaaagagatcgatgtgaagatagaagtcagcggtttctcccgctccccg
tccatcgtgtacatctccgatcggaaacgatcgctcctcctcccgtggatctttaatttc
ggtgtgcggaagacccccttagagaaggaggtgagggtcctgggagggaacgtctccttc
tcctcccagaagatcaaagagatggcggataggggcggagccgggtgctgggaggcggag
tgtgacaccaaaatatcagaagagcaatctaaagacctgagcttcaccctcaccaacccc
aagtgtggcccctaccgcatggagatccacctacagctgggggcccgcaagagacgcctc
accagggaggtctgtgtgtccaacgtcacagtctcggcttccccggccttcttcagcatg
gagtccaatgtgaccctcgcatgttccgtcacctgcctggacccggaggggaagctctgc
tggggctccaatctgattggacagaaggtgtgcggagcgccgggacagagaaccttcacc
aagaatatcaccgccgtgcccgagaccttggggaactggacctgcaatgttctgattgga
ggaaatatcgcggccggcgctaatctgacactggaggtcaccctgagcctcttccatccc
tccggcgccctcttctgggtgacggtggcggtgggagtcgtcgtcctcctgttactcgcg
gtgatcgtcgcggtcatggcggctcggtgtcgcagggtgaggcgtgcgcggtacagagcc
tggttactggagaacctccaccagcagagggtgtgcgagtgcaacgggtttgcacccaag
aggctcagagagaacgtctga
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