Rana temporaria (common frog): 120914300
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Entry
120914300 CDS
T07929
Name
(RefSeq) class II histocompatibility antigen, M alpha chain
KO
K06752
MHC class II antigen
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04145
Phagosome
rtem04514
Cell adhesion molecules
rtem04672
Intestinal immune network for IgA production
rtem05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120914300
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120914300
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120914300
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120914300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtem04147
]
120914300
Exosome [BR:
rtem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120914300
Exosomal proteins of epithelial cells
120914300
Exosomal proteins of breast milk
120914300
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_2
Ig_3
Stonustoxin_helical
FAE1_CUT1_RppA
ig
Motif
Other DBs
NCBI-GeneID:
120914300
NCBI-ProteinID:
XP_040180867
LinkDB
All DBs
Position
9:complement(167145246..167174642)
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AA seq
256 aa
AA seq
DB search
MLTPDTQRPIRIICTVLLVLPLLAVQAQQVDHLLSQVLFCQPNTSTPGLLKMFDDEQMFS
YNFSKKTTSAWLPDFDQWSDQAFPNAANISAFLSLCSNLREALTETLKDIMPEARGGTQT
KVFTAHPLRIGSPNTLICFIKDVYPPALTVTWRKNGELLSREPQSPGYFALFDGSFQAFS
YLNVTPNYNDIFSCNVQVAGDSRTIVEYWVPDYPVPSDVQENALCGLGCALGIVFLFLGF
MFLCLSKKIQQTDYSS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccccagacactcagcgaccaatcaggatcatctgcactgtgctgctagtgctc
cctctgctggcggtgcaggcgcaacaggttgaccatctgttgagtcaggtgctcttctgt
cagcccaacacatcgaccccggggctcctgaagatgtttgatgatgaacaaatgttcagc
tacaacttcagcaagaaaaccacctccgcctggcttcctgactttgaccaatggagcgat
caagccttccccaatgcagcgaacatttcggcttttttgtctctttgtagcaaccttcgc
gaggctttaactgaaacactaaaagacatcatgccggaagccagaggtggtactcaaacg
aaggtgttcacagcacatcccctccgaatcgggtcgcccaacacattgatctgtttcatc
aaagacgtgtaccctcctgcactcaccgtcacctggaggaagaatggagaactgttgtca
agagagccacaatctcctggatactttgccttgtttgacgggagcttccaggccttctca
tacctcaacgtcacccccaactataatgatatcttctcctgtaatgtgcaagtggcgggc
gatagcaggactatcgttgaatactgggttccagactacccggttccctctgatgttcag
gagaacgcattgtgtgggttaggttgcgctcttggtattgtcttcctcttcctgggtttc
atgttcctctgtctttccaaaaaaatacaacagacggactattccagttga
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