KEGG   Rana temporaria (common frog): 120914303
Entry
120914303         CDS       T07929                                 
Name
(RefSeq) RLA class II histocompatibility antigen, DP alpha-1 chain-like
  KO
K06752  MHC class II antigen
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem04145  Phagosome
rtem04514  Cell adhesion molecules
rtem04672  Intestinal immune network for IgA production
rtem05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120914303
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120914303
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    120914303
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120914303
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtem04147]
    120914303
Exosome [BR:rtem04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120914303
  Exosomal proteins of epithelial cells
   120914303
  Exosomal proteins of breast milk
   120914303
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3 Ig_2 ig
Other DBs
NCBI-GeneID: 120914303
NCBI-ProteinID: XP_040180872
LinkDB
Position
9:complement(167467733..167530539)
AA seq 245 aa
MPAKKCVLLMISVFCLHSGEAVKRENVLTQAVFYQTLEPSGEYMFQFDKDEIFYVDLDKK
QTVWRLPQFGEVAGFEAAAALQNMAVLKHNLDSYKQRSNFTEAKNVPPEVHVFPESSVIV
GEPNILICLGTKFFPPVIKMSWQKNSVPVTEGVSMTDFYPTPDGSFSKFLYLTTIPQDGE
VYTCSVEHAGKTTNTFWHPEVSKPISEATENVICGLGLLFGMCGVIAAIVLICKGMKSMN
QGRGH
NT seq 738 nt   +upstreamnt  +downstreamnt
atgcctgcaaaaaaatgtgtgttattgatgataagtgtgttctgtctacacagcggagaa
gccgtgaaacgtgaaaatgttctgacgcaggccgtcttttaccagacactggaaccatca
ggagaatacatgtttcagtttgacaaagatgagatcttctatgtagatttggataaaaag
cagaccgtgtggaggctcccacagtttggtgaagtggccggctttgaggcagctgcagct
ctgcagaatatggctgtgctgaaacataatcttgattcttataagcagcggtcaaacttc
acagaagcaaaaaacgttcctcctgaagttcatgtatttcctgaaagctctgtgattgtg
ggtgagcctaatattctgatctgtctgggtaccaagttctttccacctgtgatcaagatg
agctggcagaagaacagtgtgcctgtgacagaaggagtgtcaatgacggacttctacccc
acaccagatggatcattcagcaagttcctgtacttaactaccatcccacaggatggagaa
gtgtacacctgttctgtggaacatgctggaaagactacgaacactttctggcaccctgag
gtatccaagccgatttctgaggccactgagaacgtgatctgtggtctgggtctgcttttt
ggcatgtgtggtgtcattgctgcaattgtgctgatctgtaaaggaatgaagagtatgaat
caaggaagagggcactaa

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