Rana temporaria (common frog): 120916386
Help
Entry
120916386 CDS
T07929
Symbol
ARHGEF1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04270
Vascular smooth muscle contraction
rtem04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120916386 (ARHGEF1)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
120916386 (ARHGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120916386 (ARHGEF1)
Membrane trafficking [BR:
rtem04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120916386 (ARHGEF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
SOS1_NGEF_PH
Chaperone_III
ATRIP_mid
Motif
Other DBs
NCBI-GeneID:
120916386
NCBI-ProteinID:
XP_040183263
LinkDB
All DBs
Position
10:complement(18906888..19097977)
Genome browser
AA seq
1045 aa
AA seq
DB search
MDQDDSHYGGTHSIIGAEDEDFENDIEPNVDDQSSYFQSIELVKEHPAYIMVFLHHVVLQ
FDPSPVLCYLHVEILRNLNAKEGKKLFLDFYNTFLMKGAVMRVQIPNSVSFELDRTRPDL
IPDDTLKKYLQEIQAYQFPEISRQLEDFRAKRVLGMTPGETELKELESYRTNDKYILQSK
EKQLAERLLVKLDDMHPSISPDEEKSSAIVHAIAIYMKHIGVKTKAADSKKPKSGFFRKM
VSAKKPDEPPKSKKPFSIWNRNETPHNVDPRPKLEPEADKQGAPERKFSHGQRTFDRSDS
SLAKPKATNEGPDLGVSVTIHPPPSDPSDSDTVSDGTSSLDVTDVSKGSPTTELCPTDQQ
EDSAENDRRKKRNSSKLGRSESLRVYERKRSQRGSAKGKQARSRSDVDLEAAARANDLQL
SSSKSSSKSGNFTPEPGGSADGPPSFLLPQSEETEPRVLEIENDPPNWRELVPPETLLRL
TKSEIKRQEVINELLFTEHAHVRMLRVLHDIFYLPMLNSWIPNMELENIFPSLDDLIDAH
ALFLDNLKKLRQENNSVIQEIGDTLLQRFDGTEGQWFQKISSRFCSRQPFALEQLKQKQK
KDPRFTQFIQEAESHPQCRRLQLKDIIPFEMQRLTKYPLLLQNIANLTEEDEEKQKVQKA
AESCRQILNHVNTEVREMENKMKLTDYQRRLDMSNLKQSSDPLFNEFKNIDISKKNLIYE
GALTWRVSKDKSVDVHVLLLDDIMMLLQKQDERLVLKCQSRTLTPTPDGKLMLSPIIKLN
TAMAREVATDNKAFFVIFKWEDRPQIYELVAPTTSEKNMWFSLVKQSTGHFEPSSSKARM
SYSSQRMIPQSPSEFSENGASLKESVTKEEKESLEEAGLGPEESLGDPTLMEHLAHNLGG
NVASSALEEVTVLKRLLVRNIRLSLDVESFPNLESWSDFSREETGASQNVQEEKAANGDQ
EGDNSVPESEREGRDPGENGQVLASRDVGESLCAPIVLSQEQSEEVRRHILLLEEKVHQL
KVIEEDYLHLQRTVTKFSVSQSSFT
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagacgacagtcattatgggggtacccactccatcataggagcggaggatgaa
gactttgagaatgatattgagccgaatgttgatgaccaaagcagctatttccagagcatt
gaactcgtaaaggagcaccctgcttatattatggtgtttcttcatcatgttgtactacag
tttgacccaagcccagtgctctgctacctgcacgtggagatcctgagaaacctcaatgcc
aaagagggaaaaaagcttttcttggatttctacaatacgttcctcatgaaaggagcggtt
atgcgtgtccaaatcccaaacagcgtctcctttgaactggatcggacaaggccagacctc
atcccagatgacacactcaagaagtatctccaggagattcaggcgtaccagtttccagag
atttccagacagctggaagatttcagggctaagcgggtattgggcatgactcccggcgag
actgaacttaaagaactggagtcttatcggaccaatgataaatacatcctacaatccaaa
gagaaacagctggcagagcgcctactggtcaagctggatgatatgcacccaagcatctct
ccggacgaggagaaaagctctgctattgttcatgccatcgccatctacatgaagcacatc
ggggtgaagaccaaggcggcggatagcaaaaagcctaaaagtggctttttccggaaaatg
gtgtctgctaagaagccagatgaacctccaaagagcaagaaaccgttcagcatctggaac
cgcaatgaaaccccccacaatgttgatcccaggccgaagcttgagcccgaagctgacaaa
caaggggccccggagagaaagttcagccacgggcagaggacctttgacaggagcgacagc
agccttgcgaagcccaaagccaccaatgagggcccggaccttggtgtatctgtcaccata
caccctccacccagtgatcccagcgacagtgacacagtgtctgatggaacctcatccttg
gatgtcacagatgtgtccaaagggtctccaaccacagagctgtgcccaacagaccagcaa
gaggacagtgcagagaatgacagacggaagaaaaggaactctagtaaactgggtcgctca
gagagcctgcgagtttacgagcgcaagcgttcccagcgaggctcggctaaaggcaagcag
gcgcgctctcgcagtgatgtggatctggaggctgcagcccgagcaaacgacttgcagctc
tcttcaagcaaatccagctctaaatcaggcaacttcactcctgagcctggagggagtgca
gatggtccgccgtcctttctgcttccccagtctgaggagactgagccgcgcgttttggag
atcgagaatgaccccccaaactggagggaactcgtcccccctgaaacactcctcaggctg
acgaaaagcgaaatcaagcggcaagaggtcatcaatgaactgctattcacagagcacgct
catgttaggatgttgcgtgtcctccatgacatcttctaccttcccatgttgaattcctgg
atacccaacatggagctggaaaatatcttccccagtctggatgacctcatagatgctcat
gccttgttcctggataacttgaaaaagctgcgtcaggagaacaactccgtaatccaggag
atcggggacacgttgctacagcggtttgatggcacagagggacaatggtttcagaagatc
tcttcgaggttctgtagccgacagccatttgccctggaacagctgaaacagaagcagaag
aaagaccccagattcacacagtttattcaggaggcagagagccatcctcaatgtcgccgg
ttacaattaaaggatattatcccctttgagatgcagagactgaccaaataccccctacta
ctgcagaatatcgcaaacctcaccgaggaagacgaggagaagcaaaaagtacaaaaggcg
gctgagagttgtcggcagatcctgaaccacgtcaatacagaagtccgagagatggagaat
aagatgaaactcactgattaccaaagacgtcttgatatgtcaaacttgaagcagagcagt
gacccgctgttcaatgagttcaagaacattgatatcagcaagaaaaatctcatctatgag
ggagcacttacttggagggtcagcaaggacaagtcagtagatgttcacgtcttgctgttg
gatgacatcatgatgctacttcagaagcaagatgagcgattagtcttgaagtgccaaagt
cggacactcaccccaacgccggatgggaagctgatgctgagtccaatcattaagctgaat
acggcaatggctcgagaagtggctactgataacaaggccttctttgttatattcaaatgg
gaggacagaccgcagatttatgaactggtggcccccaccacatctgagaaaaacatgtgg
ttttctctggtcaagcaaagtactggccattttgaaccatcttcaagcaaggcaagaatg
tcctacagcagtcaacgcatgatcccacagagcccctcggaatttagtgagaatggtgct
tccctgaaggagtctgtcaccaaagaggaaaaggagtctttggaggaagctggtttagga
ccggaggagagtcttggggacccgacccttatggaacatctggcccacaacttggggggc
aatgtggccagttcagctctggaagaggtgacggtgctgaagaggttgttagtacgcaac
attcgccttagccttgatgtggagtcgttccccaacttggagagttggtctgatttttcc
cgcgaagaaaccggagcatctcaaaatgttcaagaggaaaaggccgccaatggagaccag
gaaggagataattctgttccagagtccgagcgagaaggcagagacccgggagagaacggt
caagtcctggcctccagagatgttggagagtctctatgcgctcccatcgtactatctcag
gagcaatcggaagaggttagaaggcatatcctactactggaggagaaggtccaccaactt
aaggtgatagaagaggattacctacacctgcagaggacagtcaccaaattttcagtatca
caaagtagttttacatga
DBGET
integrated database retrieval system
