Rana temporaria (common frog): 120916505
Help
Entry
120916505 CDS
T07929
Name
(RefSeq) interferon regulatory factor 3-like isoform X1
KO
K05411
interferon regulatory factor 3
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04620
Toll-like receptor signaling pathway
rtem04621
NOD-like receptor signaling pathway
rtem04622
RIG-I-like receptor signaling pathway
rtem04623
Cytosolic DNA-sensing pathway
rtem05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120916505
04621 NOD-like receptor signaling pathway
120916505
04622 RIG-I-like receptor signaling pathway
120916505
04623 Cytosolic DNA-sensing pathway
120916505
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120916505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120916505
04131 Membrane trafficking [BR:
rtem04131
]
120916505
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
120916505
Membrane trafficking [BR:
rtem04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
120916505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
120916505
NCBI-ProteinID:
XP_040183442
LinkDB
All DBs
Position
10:complement(33294828..33346678)
Genome browser
AA seq
459 aa
AA seq
DB search
MSFHKPRIIPWLEEQINSQSYPGLQWTNLEQTQFQIPWKHWLRQDKCEDDVKIFEAWAIA
SGSYNPNTDTANPAVWKRNFRSALNRKSEIRVVKDNSSESNNPHKIYEFNRGTPGNITPE
DLYCDDSISPSSQPPPFSSPRIQFTVDRNLSQNIDQMQISVSEDDLYLDPENLPTSAQEW
CSNISSPDVFVAAASPVGPDISPYAPYPDNTEQVQGTSQEVADSAHQHLFNYFLPNNTFE
TQFEVKIYYRGTLVKKSLVKNSCGFHLTSRQLTNQENYLEDVTLPSPSIISDLKVAAEIN
KLLQNLEQGTLVEVQNGAICAKRQGKCRSFWSMTETPTTNLPSPINKEAYTELYKYQQFV
KELIEFIERRRQESPQYDIWICLGETWPDGRPWKKKLIMVQITPISMQMLHELSYSTGAS
SLRSNEVNLQISDSLSSSLRSTSDILNFLKEFEERMDCA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcataagccacggataattccttggctggaagagcagatcaacagccagagc
tatccaggtcttcaatggacgaacttggagcagacacagttccagataccatggaaacat
tggctaagacaggataaatgtgaggacgatgtgaaaatatttgaggcctgggctattgcc
agtggtagctataaccccaacacagatacagcaaacccagcggtatggaaaaggaatttt
cgctctgctcttaatagaaagagtgagatccgcgtggtcaaggataacagttcagagtct
aataacccacataaaatctatgagttcaacagagggacacctggtaatatcacccctgaa
gatttgtattgcgatgacagtatcagtccatcttctcaaccacctccattcagtagccca
agaatccagttcactgtggacagaaatctttctcagaacatagaccagatgcagatttct
gtcagcgaagatgacttgtatcttgatcctgaaaatctgccaacatcggctcaggagtgg
tgcagtaacatctcctccccggatgtgtttgtagctgcagctagcccagtcggccctgat
atttctccatatgcaccatacccagataataccgaacaagttcagggtacatcacaagag
gtggccgattctgcccatcaacacctgttcaactactttttacctaacaacacatttgaa
acacagtttgaagtaaagatttattaccggggaactctggtgaagaaaagtttggtaaaa
aactcctgtggcttccacctcacttcaaggcagctaacaaaccaagaaaactatttagag
gatgtgactctgccgtcaccttccataatctcggacctcaaagtagctgctgaaattaat
aaacttctacaaaacctagaacaaggaactctggtggaagtacagaatggagccatctgc
gccaagaggcaaggcaaatgcagaagcttttggagtatgacagagacgccaacaacgaac
ctgcccagtccaataaacaaggaggcctacaccgagttgtacaaatatcagcaatttgtg
aaagaactgattgagttcatagaacgcaggaggcaagaatctccacaatatgacatttgg
atttgtcttggagaaacttggcctgatggcagaccatggaagaagaaattaattatggtg
caaatcacaccgatatcaatgcagatgcttcatgagctgagctacagcaccggagcctca
tcactacgcagcaacgaggtcaacttgcagatctccgactcgctgtcctcctctctgcgt
agcacaagtgatatactgaatttcctgaaggagtttgaggaacggatggactgcgcttaa
DBGET
integrated database retrieval system
