Rana temporaria (common frog): 120917211
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Entry
120917211 CDS
T07929
Symbol
BDNF
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120917211 (BDNF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtem04052
]
120917211 (BDNF)
Cytokines and neuropeptides [BR:
rtem04052
]
Cytokines
Growth factors (RTK binding)
120917211 (BDNF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
NTF3_N
Spaetzle
Motif
Other DBs
NCBI-GeneID:
120917211
NCBI-ProteinID:
XP_040184275
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All DBs
Position
11:34991603..35131923
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AA seq
256 aa
AA seq
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MFHQVRRVMTILFLTMVISYFSCMKAAPMKEASVRGQSGLAYPGLRTHGTLENIGGPMSG
SRGGGLPSLTDTFEQVIEELLEEEQTIRQSEEKKDSDMYSSRVMLSTQVPLEPPLLFLLE
EYKNYLDAANMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMTGQTVTVLEKVP
VPKGQLKQYFYETKCNPMGYMKDGCRGIDKRYWNSQCRTTQSYVRALTMDSKKKVGWRFI
RIDTSCVCTLTIKRGR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgttccatcaggtgagaagagtaatgaccatccttttccttactatggttatttcatac
ttcagttgcatgaaagctgcccccatgaaagaagccagtgtcagaggacaaagtggcctg
gcctatccgggtcttcggacccacggtactctggagaacataggtgggccaatgagtggg
tcaagaggaggaggacttccatccttgacggatacctttgagcaggttattgaggaactc
ctagaagaggaacagaccataaggcagagcgaggagaagaaggactcagatatgtattca
tctcgagttatgctaagcactcaagtgcctttggagccccctttgctttttctccttgag
gagtacaaaaactacctggatgctgcaaacatgtccatgagagtgcgccgccactcagac
ccagcccgacgcggggagctgagcgtgtgtgacagtattagtgaatgggtgactgcagcc
gacaaaaaaactgcagtggacatgacaggacaaacagttactgttctagaaaaagtccca
gtacccaagggtcaactgaaacaatatttctatgagaccaaatgcaatccaatgggctac
atgaaggatggttgcaggggcatcgacaagaggtactggaactcgcaatgccgaactacc
cagtcttacgtgcgtgcgctcaccatggatagcaaaaaaaaagtcggctggcgctttata
aggatagacacttcttgtgtatgtacactgaccattaaaagaggaagatag
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