Rana temporaria (common frog): 120919189
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Entry
120919189 CDS
T07929
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03440
Homologous recombination
rtem03460
Fanconi anemia pathway
rtem04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120919189 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
120919189 (BRCA1)
03460 Fanconi anemia pathway
120919189 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtem01009
]
120919189 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120919189 (BRCA1)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120919189 (BRCA1)
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120919189 (BRCA1)
Enzymes [BR:
rtem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120919189 (BRCA1)
Protein phosphatases and associated proteins [BR:
rtem01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120919189 (BRCA1)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120919189 (BRCA1)
Multi subunit type E3
BRCC complex
120919189 (BRCA1)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120919189 (BRCA1)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
120919189 (BRCA1)
BRCA1-A complex
120919189 (BRCA1)
BRCA1-B complex
120919189 (BRCA1)
BRCA1-C complex
120919189 (BRCA1)
BRCA complex
120919189 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
120919189 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_assoc
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
BRCT_2
zf-RING_5
zf-RING_10
RING_XB3-XBAT31
zf-Nse
zf-RING_6
zf-ANAPC11
zf-MIZ
zf-rbx1
Sina_RING
Motif
Other DBs
NCBI-GeneID:
120919189
NCBI-ProteinID:
XP_040187161
LinkDB
All DBs
Position
12:77472501..77762850
Genome browser
AA seq
1618 aa
AA seq
DB search
MTCETQHVEDIQDVLSVMQKTLECPICLDLMKEPVATRCDHIFCRFCMLQLLGRKKKGRA
QCPMCKKEVTKRSLQESPRFKLLIDGLKKIINAFELDSGYKFFPSQDHAKNILMTCNESK
KKEEQTVVQSTGYRNRKRTVQRGKCEDHTALLETSIDTLLTRDAGTESCNRLKRKKQETN
NVNSKRPLITEFESDYSEDDLFKNVGSLGNDCGKSYPQSELGEDVDEDLKICENTSLKPE
TDEVVASDLAEYGFSERDLESTRSNLLCMDSTRALKEAASKKRSSIDLADRKAEQSLLGY
LDEHNDQAGSIGQSKKHVHDESQILKMSFDNQYDKDDSVPEEMTSTQSSPRCMPNAVPRK
RLKRSIQRVNEWIQKTSEFLNATPWDEELLSEVFPEFDDVSDKGSCMSDETEIMTAFCPN
TESDAVDKTVNVQDKVFGKVYRREKKSNTMPKITVFASVHVDGVADSRKTNKIPKRSTSG
LQPEDFIRRVETTEEISYTNDGVVAKDIVINTEKKDSKYLNNDKSNAQEAKLKTQNKSLK
RKSECSLILVKSSGLGMDNKHSLSHLSEININSYPSSNESGHEDNQRNVRRSRRLNVLSK
SVVPSLNKKTARTSGKAIKEIKTACGHPVTETVFQVKQMCTTFNESEDQITNILTPNGKV
VPFVTDVEIHPAHPECETYDVSIKDCCNMQTEAVGNVLSVEDIDSDADTQHLLKAFKSAK
RMSFKLDSVTEIDNKEHSNLVNLSDTKGNLPNQAGIALTVSEEQEQVIHTNQSILSNGNS
LGKFNVGGEAIQQDSHIQNLPANLRFDNKNCEENAHMPEKKSMLSAGQLDVSNPVNETTL
CKESNRKINSIARKSEVLELCSENDTTTRYPIIAHQSPSVRRVDTRSATTRGENKQVKKD
CFQEQNFDEQVTQIPSDNRSQGSVREKLLQHSVSHHSSPLKSSEATSDTPDGILGITDRL
GEKHSFCAEVEKSFVFAKEQKVGVSDSTKSPINESQLIKKKKGRAQKLESSEEESSEDEE
LPCFNNFLFGNASNLAAQKCASSDSSPKQQGGGVLAMFSSYSTSGKTQTSLNFPRETLLG
SQESVNLFSSQSNTSDHSTNITTDQELKHNQSQPECHENNSKRNGDTIYSNGQGQTDYEI
ADNFYEDTCKEQNLDEVSECESEASHTGDSSGLSSQCDVFNTQQRDALRNNLEKIQEEMA
ALEAKLEQHNAQSPSSEKKQTSTAELNTIRLQETCQKQTDHGANKSPDCVPETDVQPLKS
VEQPVDFGIGLRSPTPPPSPSQTKSRMETPEKVRSTFLLLKDLESALTQEESNKLEQSAE
CSTSTKRPDACKPPSTSLNQATASPRRSLRSTTQSNGAMNKISTNRQRDSTEVKRQQQTN
IGGIKRSSSPTFTSPIRTRKGSASSKIPVVPNRRNFSIVASGLSQSELMLVQKFARKTQS
ILTGEVSESTTHVIIKTDEYLVCERTLKYFLGIAARKWVVSYDWIAQSFREGRILDEYDF
EVKGDVINGRNHRGPRRSRLGSDGLLLSDYEICCLGSFKDMSRENLEWMVSLCGASFVKE
PQMFKHKEGTTSLVVVQPDGKSDYTAMRKRYRALVVTREWVLDSVSSYKLQTFDNYLV
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgacttgtgaaactcaacacgttgaagatattcaggatgtcctgtctgtcatgcagaag
actttggagtgtcccatatgcttggacctaatgaaggagcctgttgctaccagatgtgat
catatattttgcaggttttgcatgttgcaacttcttggcagaaaaaagaaaggccgagcc
caatgccccatgtgcaagaaagaagttactaaaagaagcctccaggaaagccccaggttc
aaactgctgattgacggcttaaagaagattatcaatgcttttgaactagattctggatac
aaattttttccaagtcaagatcatgccaagaatatcttaatgacctgtaatgagagcaag
aagaaggaggaacaaactgtggtgcaaagcacagggtatcgaaacaggaaaagaactgta
caaagggggaaatgtgaagaccacacagccctattggaaaccagtattgacacactgtta
acaagagatgcagggactgagagctgtaacagacttaaacgcaaaaagcaagagacaaat
aatgtgaacagcaagagaccactaattacagagtttgagtctgactattctgaagatgat
ttattcaagaacgtcggcagcttgggaaatgattgtggtaaatcttatccgcaaagtgaa
ttgggagaagatgtggatgaagacctgaagatctgtgaaaatacttcattaaaaccagaa
acggatgaggtggtggcatcagatctagctgaatatggattttctgaaagagaccttgaa
agcacaagaagcaatttattatgtatggatagtacaagagccttaaaagaagcagcttct
aaaaagaggtcctccattgacttggcagataggaaagctgaacaaagcctccttggttac
cttgatgagcacaatgatcaagcaggatccatcggtcaatcaaagaagcatgttcatgat
gaaagccaaattttaaaaatgtcttttgataatcagtatgataaagatgactctgtccct
gaggagatgactagtactcagagcagtccaagatgcatgccaaatgcagtccctagaaaa
agactgaagagaagtattcaaagagtgaatgagtggattcagaaaacctcagagttttta
aatgctacaccatgggatgaagaattgctttctgaagtttttcctgaatttgatgatgta
tctgacaagggttcctgtatgtctgatgagactgaaattatgacagcattctgccccaat
actgagtcagatgctgtagataagacggttaacgttcaagacaaggtttttggcaaggta
tacagaagagagaaaaagtcaaacactatgcccaaaataactgtctttgccagtgtccat
gttgatggtgttgctgattctcgaaagacaaataagattccaaaaaggtcaacaagtggt
ctccaaccagaagacttcattaggagggtagaaacaactgaggagatttcttacactaat
gatggagtggttgcaaaggacattgtaataaatactgagaaaaaggattctaaatatcta
aacaatgataaatcaaatgcacaggaagcaaaactaaagactcaaaataagtctctaaaa
agaaagtctgaatgttccctgatattagttaaaagttcaggtcttggcatggacaataaa
catagtctttctcacttatcagaaataaatattaattcatatcccagcagcaatgaatca
ggacatgaggataaccaaagaaatgtgagacgaagtaggagacttaatgtgttgtcaaaa
agtgtggtaccctctctgaacaaaaaaacggcaaggaccagtggcaaagcaattaaagaa
attaagacggcctgtggccatcctgttactgaaactgtttttcaagtgaaacaaatgtgc
actactttcaatgagtcagaagaccaaataaccaatattttaacacctaatgggaaagta
gtcccatttgtgacagatgttgaaattcaccctgctcacccagaatgtgaaacttatgat
gtcagcattaaagattgctgtaatatgcaaacggaggctgtgggaaatgttttaagtgtt
gaggatattgactcagatgctgacactcagcacttgctgaaagccttcaaaagtgctaaa
agaatgtccttcaaactagattcagttactgaaattgacaataaagaacattctaatctt
gtaaacctatctgacaccaaaggcaacttaccaaatcaggctggaattgcattaacagtg
tctgaggaacaggaacaagtgattcacaccaatcagtctattctttcaaatggcaacagc
cttggtaaatttaatgttggtggagaagcaattcaacaggacagtcatatccagaatttg
cctgcaaatctaagatttgataacaaaaattgtgaggagaacgcacacatgcctgaaaag
aaaagtatgttaagtgccgggcagctggatgtttctaacccagttaatgaaactacactc
tgcaaagaaagcaaccggaaaataaactctattgcaagaaaaagtgaggtacttgagttg
tgttcagagaatgatacaacgactcgttaccctataattgctcatcaaagtccttcagtg
aggagagtagacactagaagtgcgaccactcgaggagaaaataaacaagtaaagaaagat
tgttttcaggaacaaaattttgatgaacaagtaactcaaataccttctgataacagatct
caaggttcagtgagagagaaattgctacagcattcagtgtctcatcacagtagccctctc
aaaagttctgaggctacctcagatacacctgatggaatattgggcattacagacaggctt
ggagaaaagcacagtttttgtgctgaagtggaaaaatcctttgtttttgcaaaagagcaa
aaggttggagtttctgatagtaccaagtctccaatcaatgaatcacagctcattaaaaag
aagaaaggaagagcacagaagttggagtcctctgaagaagaatcaagtgaagatgaagag
ttgccttgctttaataattttttgtttggcaatgcatcaaacttggctgctcagaaatgt
gcctcttctgattcctcaccaaagcagcaaggaggtggggttttggccatgtttagtagt
tacagtacaagtggtaaaactcagacaagtttgaacttccctagagaaacgttattagga
agtcaggagtctgtgaatttgttttcttcccaatcaaatacatctgatcattctacaaat
ataactactgatcaagagctcaagcacaaccagtcacaaccagagtgccatgagaataat
tccaaaagaaatggtgatacaatctacagtaatggacaagggcagacagactatgagata
gcagataatttttatgaagacacatgcaaagagcaaaacttagatgaagtttctgaatgt
gagagtgaagccagtcacactggtgactcctcaggtctgtcttctcaatgtgacgtattc
aatacacagcagcgggatgctttgcggaacaatttagaaaaaatccaagaggaaatggct
gctctggaagccaaactggaacagcacaatgcacaaagcccttcatctgagaagaagcaa
acctccacagctgagcttaacacaataagactgcaggagacatgccagaaacaaacagac
catggagcaaacaaatcacctgattgtgttccagagactgatgtgcaacctttgaagagt
gttgagcaaccagttgactttggtatagggttaagatcacctacccctccacctagtcca
tcccagacaaaatcacgaatggaaactccagagaaagttcgttccaccttcttgttgttg
aaagatttagaaagtgcccttacacaggaggagtctaataaattggaacagtcagcggaa
tgcagtacatccacaaagaggccagatgcatgtaaacccccatcaactagtctaaatcaa
gctacagcctccccaagaagaagcctgcgaagtacaactcagagtaatggagccatgaac
aaaatttccactaacagacaaagggattctacggaggttaaacggcagcagcaaacaaat
attggtggtattaagagaagctcatctcctacattcacatcacctataagaactagaaag
ggttcagcatcaagcaagattcctgtagtacctaataggagaaacttttccattgtggca
tcaggccttagtcagagtgagctgatgctggtacagaaatttgcaaggaaaacccagagc
atccttactggtgaggtgtcagaatcaaccactcatgtcatcataaaaacagatgaatat
ctggtgtgtgaaagaacattgaagtatttcctgggaatagctgccagaaaatgggtggta
agctatgactggattgcacagtctttcagagagggaagaatccttgatgagtacgacttt
gaagtgaagggagatgtgatcaatggaagaaatcacagaggccccagaagatctagacta
ggatcagatggactgctgctgtctgattatgagatttgctgtctgggaagtttcaaagat
atgagtcgagaaaatctggaatggatggtgtccctatgtggagcgtcctttgtaaaggag
cctcagatgtttaaacataaggagggaaccacatctcttgtggttgtgcaaccggatggg
aagtcagactacacagctatgcgaaagaggtaccgtgctctggttgtaacacgcgaatgg
gtactggacagtgtatccagctataagctccagacattcgacaattacctcgtttga
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integrated database retrieval system
