Rana temporaria (common frog): 120921105
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Entry
120921105 CDS
T07929
Symbol
ABCD4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem02010
ABC transporters
rtem04146
Peroxisome
rtem04977
Vitamin digestion and absorption
rtem04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120921105 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120921105 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
120921105 (ABCD4)
04980 Cobalamin transport and metabolism
120921105 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120921105 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtem02000
]
120921105 (ABCD4)
Enzymes [BR:
rtem01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
120921105 (ABCD4)
Membrane trafficking [BR:
rtem04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
120921105 (ABCD4)
Transporters [BR:
rtem02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
120921105 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_29
FtsK_SpoIIIE
AAA_23
RsgA_GTPase
DEAD
NACHT
nSTAND1
nSTAND3
T2SSE
nSTAND_NTPase5
AAA_22
DUF815
Motif
Other DBs
NCBI-GeneID:
120921105
NCBI-ProteinID:
XP_040189696
LinkDB
All DBs
Position
13:complement(14944847..14977810)
Genome browser
AA seq
601 aa
AA seq
DB search
MGMRSVRADRGDRPRLDWLFVRRFLALQSVLFPQWTARNTLMMMTLLMVALTGQLVIYQV
GILPSQFYGILSDRDLTSFRSLAVVAVALIFVISMLRSAEQYISKLVYVNCRKVMTQYLH
QIYFTKQVYYTMSVEHSHVDNPDQRMTQDVERLCRELTSFASKILTTPFTLVYYSYQCAL
STGWMGPVSIFGYFVVGSLVNKLLMGPVIPRLVEQEKLEGDFRFKHVQIRVNAEAAAFAR
AGCVEYARTENRLKSLIATQKDLIYQELWLSFGTNTFDYLGGILSYMTIAIPIFSGVYND
LSSGELSELISKNAFVSIYLVNCFSQLMDLSSNLCDVAGYTHRIGELVEVMMKILEEDKE
LSPEEEEDGSPQEKPQNGEGVFILDNVTISTPVSECTLVRELSLRVSKGNNLLISGETGS
GKSSILRVLAGLWKTKHGRVSVHTPFGPHGVLFLPQKSFLSDGSLREQVIYPLKEIHPNS
GRMDDDRILRSLEMSGLTSLVSRTGGLDQAVDWNWPEVLSPGEMQRLAFSRLFYLQPKYA
VLDEASSALSEDAEVELYTHCTQMGMTLISVGHRRSLQEFHHLELRLGPGGQWELRRLKK
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggggatgaggagtgtgagggcggacagaggggacaggcctcgtctggattggctcttt
gtgcgccggttcttggctctgcagtctgttctcttcccacaatggacagcccggaatacg
ctgatgatgatgacactgctgatggtggccctgacagggcagctagttatctaccaggtt
ggcattctgcccagtcagttctatggtatcctgtctgatcgagacctgaccagcttcagg
agtttggcagtagtggctgttgcgctgatcttcgtcatttccatgctgcgcagcgcggag
cagtacatcagcaaactggtctatgtaaactgtcggaaggtgatgacgcaatatctgcac
caaatttacttcaccaaacaagtctactacaccatgagtgtggagcacagccatgttgat
aacccagatcagaggatgacgcaggatgtggaacgtctctgccgcgaactcaccagtttc
gccagtaaaattcttaccacacccttcacacttgtctattactcctatcagtgtgccctc
agtacgggctggatgggtcctgtgtccatcttcggatattttgtggttggatctctggtg
aataaacttctgatgggtcctgttatccccagactggttgagcaggagaagctggagggt
gattttcggttcaaacatgtacagatccgcgtcaatgccgaagctgcagcctttgccaga
gccggctgtgtagaatatgctagaacagagaatcgcctgaagagccttatcgccacccag
aaggatctgatatatcaggaactatggctgtcttttggaacaaacacctttgattatctg
ggtggaatcctgagttatatgactatcgctattcccatcttctctggagtgtacaatgac
ctgagttctggtgaactgagcgagcttatcagtaagaatgcatttgtttctatctatctg
gtcaactgcttcagtcagctcatggatttatccagcaatctgtgcgacgtggctgggtac
acacatcgaattggggagctggtggaggtgatgatgaagattttagaagaagacaaggaa
ttaagtccagaggaggaagaagatgggtccccgcaggagaagccacaaaatggcgaaggg
gtatttatcctggataatgtaacaattagcacgccggtatcggagtgcacattagtgcga
gagctcagcctgcgtgtgagtaaagggaataatcttctgatcagtggagagactggcagt
gggaaatcctccattctacgcgttctagccggactgtggaagacaaaacatggtcgggta
tctgttcatactccgtttggtcctcacggtgttcttttcctgccacaaaaatcattccta
agtgacggaagcctgagagagcaggtgatctacccactgaaagagatacacccaaattct
ggtcggatggatgatgacagaatcctcagatcactggaaatgtcaggcctgacctctctg
gtgagcaggacggggggcctagaccaggcagtggactggaattggccagaggttctatcc
cctggggaaatgcagcgtttggcattttctcgcttgttttatctgcagcctaaatatgca
gtactggacgaggcaagcagtgccctcagtgaagatgcagaggtggagttatacacgcac
tgtacccagatggggatgacattaattagcgttgggcacagacgcagcttgcaggagttt
caccacctggagctcagacttggtcctggcggacagtgggagctgcggcgattgaaaaaa
tcgtga
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