Rana temporaria (common frog): 120927211
Help
Entry
120927211 CDS
T07929
Symbol
PKP1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtem04812
]
120927211 (PKP1)
Cytoskeleton proteins [BR:
rtem04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
120927211 (PKP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
HEAT
Nipped-B_C
HEAT_2
Cnd1
Atx10homo_assoc
ARMC9_ARM
UTP20_C
DUF639
V-ATPase_H_C
Motif
Other DBs
NCBI-GeneID:
120927211
NCBI-ProteinID:
XP_040193666
LinkDB
All DBs
Position
2:complement(368925563..369007290)
Genome browser
AA seq
753 aa
AA seq
DB search
MLSSPSPMKTALASEVFVWQNESSLALPSDMHVRSGTSRDQRVKEQVLMTVKRQKPRSSQ
SSTMNHGNRASAYETLEDSYNMNRNSSGAGNQYSKYQSGSSWGYQPPSQYNGTLKKETKR
FSSQSQFDNWGRQQFMSVGAPTSPGSDYGYMQTLKSSRSEPDLTGPSIRPTQRRQTIYNA
QYQNPQQQQQQQQRRSGRGGTNNSSFYSQQSSQWKTANMPARTPSSISTGQRQPLYSTMQ
RYESGCAQKQETYAPPQMPSRMDSRDEFDGTSMTIEKAVELLSYDKYQTSGANYIQHTCY
QDENAKNVVYQHNGIPKLIALLDNPNQNVQQAAAGALRNLVFKNNPNKLETSQKGGVRAA
VNLLRKTSNEETQKQLTGLLWNLSSTDQLKEELVREALPVLNECVVIPFSGWTENSVPGQ
KSNMHPEIFFNATGCLRNLSSAEVGRQTMRNTPGLVESLMYYIQKQVANNNPDDKSVENC
ACILHNLSYHLDSEVPNKYSQLNEQMLRNQQTDKTSTGCFSNKSEKIQNNNFDLPLPEED
VNPKGSALLSHSSAIKTYLSLLGQSKKDSILEASAGALQNLTASKGPMSNGMSQIIGVKE
NGLSQITRLLQSGNSDVVKTGASLLSNMSRHPSLHRSMGTQVLPDVSRLLSQTSTSATNS
EDIMSSACYTMRNLVMSQPQLAKQNLSTNLVGNLVNMCKSGASPKAAEAARLFLTDMWSQ
RELQGILKQQGLDKSFMGSLASSALRNTVSRVF
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgttgagttcaccatccccgatgaagacggctttagcgtcggaagtctttgtgtggcaa
aatgaatcttccctggcattgccctcagacatgcatgtgagaagtgggacgagcagagac
caacgggtcaaagaacaagtcttgatgaccgtcaagaggcaaaagccaagatcttctcag
tcttctacaatgaatcatgggaatagagcttccgcatatgaaaccctggaagattcttac
aatatgaatcgtaacagttcaggtgcaggcaatcagtattctaagtaccagagtggaagc
agctgggggtaccagcctccgtctcagtataatggcactttaaagaaggaaaccaagcgc
tttagctcacaaagtcaatttgacaactggggtcgacagcaattcatgtccgtaggagcc
cctaccagtccaggaagtgactatggctatatgcaaacccttaaaagcagtcgaagtgag
ccagacctcacaggtcccagtataagacccacccagcgccgccagaccatctataatgct
cagtaccagaatccacagcaacaacaacaacaacaacaacgccgttctggaagaggaggt
accaataactcaagtttctatagtcagcaaagctcacagtggaagacagcaaacatgcca
gcacgcacaccatcttccatctcgactggacaacgtcagccactttactccactatgcag
agatatgaatccgggtgtgctcagaagcaggaaacctatgcacctccacaaatgccatcc
aggatggattcccgtgatgaatttgatggaacatctatgaccatagaaaaggcagtggaa
cttctatcctatgacaaataccagacttctggagcaaactatatacaacatacatgctat
caagatgagaatgctaagaatgtggtataccagcacaatggaatcccgaagctaatcgct
ttgttagacaaccccaatcaaaatgtacagcaagcagcagctggtgcactaaggaatctt
gtcttcaagaataacccaaataaacttgaaacaagtcagaaaggaggtgtccgtgcagct
gtcaaccttttgaggaagacttccaatgaagaaactcagaaacaactaacaggtcttttg
tggaatttatcttctacagaccaacttaaagaggaacttgttagggaagctctccctgtc
ctgaatgaatgtgtagtgattccattctctggctggacagagaattcagtgcctggtcag
aaaagtaacatgcatcctgaaatatttttcaatgccactgggtgtttaaggaatcttagt
tcagcagaggttggacgtcaaaccatgcgtaacaccccagggttggtggagtctctgatg
tattacatccagaaacaagttgcaaataacaacccagacgataagtcagtggagaactgt
gcctgtattctgcacaatctctcttaccatttggattcggaggtgcccaataagtattcc
cagctgaatgagcaaatgttgcgcaaccaacaaacagacaaaacatccactggctgtttc
agcaataagagtgagaagatacagaataataactttgacctgccacttccagaagaggat
gttaatcctaaaggatctgctctgctgtctcactccagcgctataaagacatacctgtct
cttctggggcagagtaagaaggactccatactggaagcaagtgctggagctcttcagaac
ctcactgcaagcaaggggccgatgtctaatgggatgagtcagattattggtgtgaaagaa
aatggactttcgcaaattacacgattgcttcaatccggaaattcggatgtagtaaaaaca
ggagcatctctgctaagcaatatgtctcgccatccatctcttcacagaagcatgggtact
caggtgcttccagatgtttctcgcctcctgtcccaaacctctacaagtgcaacaaactca
gaagatatcatgtcatcagcctgttataccatgagaaatcttgttatgtcacagcctcaa
ttggcaaagcagaacctttctaccaacctagtgggaaatttggtcaacatgtgtaagagt
ggagcttcacccaaagctgcggaagccgctcgtcttttcctgacagatatgtggtcccaa
agagagctgcaaggaatacttaaacagcaaggactggataagagtttcatgggatcacta
gcaagttctgctcttcgaaacacagtttcacgggttttttaa
DBGET
integrated database retrieval system
