Rana temporaria (common frog): 120927888
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Entry
120927888 CDS
T07929
Symbol
TIAM1
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04530
Tight junction
rtem04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120927888 (TIAM1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120927888 (TIAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
120927888 (TIAM1)
Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
120927888 (TIAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
Tiam_CC_Ex
RhoGEF
PH
RBD
PH_9
PDZ
PDZ_2
SOS1_NGEF_PH
PH_11
Trypan_PARP
SNX17-27-31_F1_FERM
GNAT_acetyltran
Motif
Other DBs
NCBI-GeneID:
120927888
NCBI-ProteinID:
XP_040194795
LinkDB
All DBs
Position
2:complement(501019389..501589105)
Genome browser
AA seq
1593 aa
AA seq
DB search
MGNAESQNVEQALYGKDHPSLGRKHTSRSLRISNKASRRTRHASSGKPVHRNSEVSNRSS
STPSIPQSLAENGMEPYTQDANLDDYDSRGWVDMGMRPVSYHTDSSVTPSLNSSTVLTAA
SMQSMQDSEESRLYGEESAYFTDGNSRSQLYMTNGPNLLDAASFKKKRSKSADIWREDSL
EFSLSDLSQEHLTSTEEILCSTEEKDCDETIRNDPGDSSQQLDASQRANSLSDLYPQKSP
HSINGVPRNKFMIYCRNLVSHSPESLKYKQATAPADEPPSYSNYNTLPCRKSHCLSEGAT
NLKLSHSNSMHGRRAKTTQDVNTGGEGSEFTDSGIEATTTDTDFMSRRSNATTSSYSPTT
SRAFIGSDSGSSSGDALLQGVYENFRRELEMSSASRENLEEANSALSDEQSSGTLSSPGQ
SDILRTAAQGTVRKAGALAVKNFLVHKKNKKVELATRRKWKHYWVSLKGCTLFFYESDGR
SGIDNNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTNSQTELENWITAI
HSACATTVARQHHKEDTVKLLKSEIKKLEQKIDMDEKMKKMGEMQLSSVTDNKKKKTILD
QIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFSVSSF
HALVAARSGESGVRRRTQAMSRSASKRRSRFSSIWGLDTTSKKKQGRPSLNQVFNDGSDS
VKKSLEGIFDDTTSEDKKEKEVPLTIVHSHNADADIWVHEYLTPSWVCLPNDQPVLIAIH
PEDTAKDALEFICKTHQLDYNAHYLCLKFLCNNQQQQYIPRPEEEIYDLLYKEISICPKV
IRYIQLEKTDSSQNYGISLCSLEEEGRPHLYVQNVKQSGLAFKRGLKIGDEVMEINSAAA
RDLNSGMVKYVLAKPLLCLTVRTYPELEENRALIGAPPRRSESDCNDYNLFASSRGCSED
ETVIEATPEEIEVQLEVTDEADATDSSSEHVNAFCRSLNEMNSPDSCLSPSEFTGTPLGT
MRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTQDELDVLFGNLVEM
VEFQVEFLKTLEDGVRLVPDLEKLEKVDQFKKVLFSLGGSFLYYADRFKLYSAFCASHTK
VPKVLVKAKTDQHFKAFLDAQNPKQQHSSTLESYLIKPIQRILKYPLLLKELYSLTDAES
EEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIAEQTGEIKEVADLSMGDLLLHS
TVVWLNPPTSLGKWKKDPELATFVFKTAVVLVYKDSSKQKKKLGGSHRASMFEDRDPFRF
RHMVPTEALQLRALTTSDAETNSVCEIVHVKSESEGRPERAFHLCSSSPAEKKEFLRAVH
SILRDKHRRQLLKTESLPNSQQYVPFGGKRLCALKGARPAMNRAVSAPSRSLARRRRLVR
NRFTIDSDTVYSTSPGKEPDPEPEPEPKPPQQTNNSGDTDRWVEEQFDLAQYEEQDDLKE
TDILSSDDEYCESIKGGSMEKDLSDQLEATSLSNDSLDNIVQNTMSTHASRMTKLKKQTA
FSGMNGSIESTTEEVIWVKREDFVPARKLNTEI
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgcagaaagccaaaatgtagagcaagcgttgtatggtaaagaccatcccagc
cttgggcgaaagcacacatcccgctcacttcgaatttcaaacaaagcctctcgccgcact
cgtcatgcgtcatcgggaaagccggttcaccgaaattctgaggtcagcaataggtcaagc
agcactcccagcatcccacagtctctagcagaaaatggcatggagccatacactcaggat
gccaacctggatgactacgatagccgaggttgggtggatatgggcatgaggccggtttcc
tatcacaccgattcctctgttacaccaagtttgaatagcagcaccgtccttacagcggcc
tccatgcagagcatgcaggactctgaagaaagtaggctatacggggaggaatctgcctat
tttacagatgggaacagtcgctctcagctgtacatgacaaatgggccaaatctcttggat
gctgccagttttaagaagaaacgttctaaatctgccgacatatggcgagaggacagctta
gaattctccctctcggacctgagccaagaacacttaaccagtactgaggaaattttatgt
tccaccgaagaaaaggattgtgatgaaaccattcgaaatgatcccggagactcctctcag
caactggatgcttcccaacgtgccaactccctcagcgacttgtacccacagaagagccca
cactccatcaatggagtccccaggaataagttcatgatttactgtagaaatttggtttct
cattctcctgagtctttaaaatacaaacaggcaactgctccagctgatgagccaccatca
tacagcaactataacaccctgccttgccggaagtcccattgtctctctgaaggagccact
aacttgaagctcagccacagtaatagcatgcatggacggagagctaaaacaactcaggat
gtcaatacaggtggagagggcagcgagtttacagacagtggtattgaggccacaaccact
gacaccgacttcatgtccagacgctcaaatgccactacatccagctactcccccactacc
agccgggcctttattgggagcgacagtggtagcagctccggagatgctctcctccaagga
gtttatgagaatttccgtcgagaactggagatgagcagtgccagtagagaaaacttggag
gaagccaattcagctctaagtgatgaacaaagcagtggcactttaagctctcctgggcag
tctgacatcctccgtactgcggcacaagggactgtgcgaaaagctggggcgctggccgtc
aaaaacttccttgtgcacaaaaagaacaaaaaggtggaacttgccacccgcaggaaatgg
aaacattactgggtctctttaaaagggtgtacactgtttttttacgagagcgatggtcga
tctgggattgacaacaacagtataccgaaacatgctgtgtgggtggagaacagcattgta
caagcggtcccggagcaccccaagaaggactttgtgttctgtctcagtaattcacttggg
gatgctttcctcttccagaccaacagccagacagagctggagaactggatcaccgccatc
cattccgcttgtgccaccaccgtagccaggcagcaccataaggaggatacggtcaaactg
ctgaagtcagaaataaaaaaactggagcagaagatagacatggacgagaagatgaagaaa
atgggagagatgcagctttcttctgtgactgacaacaaaaagaagaaaacaatcctcgat
cagatcttcgtctgggagcagaacctcgagcagttccagatggatttgttccgctatcgc
tgctatcttgccagcctgcaggggggcgaactgccaaacccaaaacgcttacttgctttt
gcaagccgacccactaaagttgccatgggccgcttgggaattttctctgtgtcctcgttt
catgccctggtggccgctcgttcaggagagtccggtgtgagaagacggacacaagccatg
tcacgatctgccagtaagagaaggagccggttttcttctatctggggtcttgacacaact
tctaagaaaaaacaagggaggccaagccttaatcaggtgtttaatgatggttccgactct
gtcaagaaatcgttagaaggcatttttgatgatactacatcagaagacaagaaggaaaaa
gaggtgcctttgaccatcgtccactctcacaatgctgatgctgacatatgggtgcacgaa
tacctgacaccttcctgggtatgcttgccaaatgaccaaccagtcctaattgccatccat
ccagaagatacagcaaaagatgccttagagttcatttgcaagactcaccagttggattac
aatgcccattatctctgcctgaaattcctctgtaacaaccaacagcagcagtatatacca
agacccgaggaagagatctatgatctgctctacaaggaaatctcgatctgccccaaagta
atccgatatattcagctggagaagactgactcgtcacaaaactatgggatctctctgtgc
tctttggaggaggaaggcagaccccatctgtatgtccaaaatgtgaagcagtctggcttg
gcattcaaaagaggtttgaaaataggagatgaggtgatggagattaattcagccgcagca
cgagatctcaactctgggatggtaaaatatgtcctggccaaaccgttactgtgccttact
gtccgtacctatcctgagttggaggagaaccgggctctgataggggcaccgccacgccga
tctgagtctgattgtaatgattacaatctgtttgccagcagtcgaggttgcagtgaggat
gagacggtaattgaggcaactccagaggagatcgaagtgcagctggaggtgacagacgag
gctgatgctacggacagtagctccgagcacgttaatgcattttgtcgcagcctcaatgag
atgaactcgccagactcctgcctgagcccctccgaattcacaggaaccccgctgggcacc
atgaggcaattaacggacgccgacaaactgcgcaaggtgatatgcgagctgctggagacg
gagcgcacctatgtcaaggatctaaattgcctaatggagaggtaccttaaaccactgcag
aaagagacgtttctcacacaagacgagctggacgtgctatttggcaatctggtggagatg
gtggagtttcaggttgaatttctgaaaactttagaggatggggtcaggctggtaccagac
ctggaaaagctggagaaagtcgatcagtttaagaaagtcctgttttctctgggtggatct
ttcctatattacgccgatcggttcaagttgtacagtgccttctgcgccagtcacaccaag
gtcccgaaagttttagtgaaagctaaaacagaccagcatttcaaagcgtttctagatgcc
cagaacccgaagcagcagcactcctcaaccctggagtcttacctgatcaaacccatccag
cgcattctcaagtacccactgcttctgaaagagctctactcgttaacggacgcggagagt
gaagagcattaccacttggatgtggcaatcaaaaccatgaacaaagtggccagccacata
aacgagatgcagaagatccatgaagagtatggtgccgtgtttgaccagctcatagccgaa
cagaccggggaaatcaaagaggttgcagatttatcaatgggagatctattactacacagt
accgttgtgtggctgaaccctccgacatcacttggcaagtggaaaaaggatcctgaactg
gcaacctttgtatttaagactgcagtcgtattggtgtacaaggacagctccaagcaaaag
aagaagcttggtggatcacacagagcctccatgtttgaagaccgcgatccattccgcttc
agacatatggttcctacagaagctctgcagctgcgagcgctcactacatcagatgctgaa
acaaactcagtctgtgaaattgttcatgtaaagtcggaatccgaggggagaccagaaagg
gcttttcatttatgcagcagttctccagcggaaaaaaaggagttcctgagggcagtgcat
tctatcctacgggacaagcacaggaggcaactgctgaaaactgaaagcttaccaaactcc
caacagtatgtcccatttggggggaagaggctgtgtgcactgaagggtgctcgccctgcc
atgaacagagcagtttctgctcccagtagatcccttgcccggagaagacgtctcgttagg
aaccgcttcaccatcgactcagacacggtttactcaacaagccctggcaaagagcctgac
cctgaacctgaacccgaacccaaaccacctcagcagacgaacaacagcggtgacactgac
cgctgggtggaggagcaattcgatctggcccaatacgaggagcaggacgacctgaaggaa
acggacattctcagcagcgatgatgagtactgcgagtccatcaaaggcggctctatggag
aaggatctaagcgaccagctcgaagccacttccctctccaatgattcattggataacata
gtccaaaacactatgagcactcacgcttcccgaatgaccaagctcaagaaacagactgcc
ttttctggaatgaacggtagcatagagagcaccaccgaagaagttatatgggtgaaacgg
gaagactttgtaccagccaggaaactaaacacagaaatatga
DBGET
integrated database retrieval system
