Rana temporaria (common frog): 120928841
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Entry
120928841 CDS
T07929
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2-like
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120928841
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtem04040
]
120928841
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
120928841
Ion channels [BR:
rtem04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120928841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
LDcluster4
NUDIX
Motif
Other DBs
NCBI-GeneID:
120928841
NCBI-ProteinID:
XP_040195795
LinkDB
All DBs
Position
2:complement(14991647..15183076)
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AA seq
1504 aa
AA seq
DB search
MGNTKSKANGKDQVDGIQHHHQANLHQANLRSPYRPMTADAKKKKKTTPLVLDGAKIGDL
NSWVSKHIKKKECVVFIPQESSNGETCGCGYTREFHDISSISVPPETKWDPHKHVTEFPS
DSHGDMTFTGTTRTWAKYVRASCDTPPRRLFQLMTEQWELRVPSLLISVTGGAKNFNISP
RLKTQFSRGLVNAAQSTGAWIITGGSHAGVMKHVGEAVRDFSGGEKDSEIVLIGIATWGI
VHNRKSLLSEAGGAPALYPMDEGSQGRLCCLDNNHTHFILVDDGTHGRYGVEIPLRTRLE
KFISEQTMQRGGTAIKIPIVCVVLEGGPGTLDTIYSSMCNNTPCVIVEGSGRVADIIAQV
ANLSSSRITINLIKEKLQNLFSESYDSFTEDQIIMWTKKIQDIVRMGSLLTILREQKAGD
QGMDVAILQALLKASHNADHNGQENWDHQLKLAVSWNRSDIAETQIFTKDWTWKPSDLYP
SLTLSLIEDKPSFVRLFLERGVNLAEYLDRDTLTELYNSTDPSSLIHSKLEREATVEGSK
EVVVSTIELHHVSRVLQDLLGDLTEPLYRDAKRKLRNLAHVNIKINGKVGAMKHKNSQKL
KHPVRDLLIWCIVQNRAEMADIIWNLTQDSVAGALACTKILKALSKEEEDSKEIEDMTAL
ADLYEERAAGVFSECYRSDEKRAELLLIHVSHNWGRTTALELAQSSQALSFMSQGGVQTF
LTRTWWGKLSVDNGFIQLLLCMMLFPLIYSNFIITYRKGFTNVPSFLDGSRRNRSIRQDT
RIKSKGLKPYSWFWKLQAFFTAPNVKFYYNVVSYVGFLWLFAYVLTTDFQTYPSWREYLL
YVWVFSIFTEELRQLFYDPERRGFLKSSAQYISEFWNQVDSLALTLFAVGLICRLVRTDI
DTVYLGRVFLSVDFMIFCIRLMHIFSVSKVLGPKIIILQRMVKDIFFFLFLLAVWIVSYG
VAKQAILTTNEERLGWIFRNVIYGPYLTLFGQIPSEIDSLNFDTTKCTQNGTDPGLPKCV
VNDGTNALFPEWLTIILMCLYLLLANILLLNLLIAMFSYTFADVESHTDQVWKFHRFGLI
KEYNERPAAPPPFILLTHLHDLVKHAICGYPAHGHKVLRRDLDQEQEASLLSWESFMKDN
YQQMKQQQDDDSQENLVKGTADSVSAVLRLMKIEKGSEGYQLEGRLTELEKQMDQSTHFL
NWIISALMEKGFSSKTRLLVHSSSQEEKFAAGTDGRAEPHCLYHVNSRILHYPGSKMNRY
PVPDELVPWEVEFPGYNPPLYNADRNDRGTYDPNTEMEQKSRKYNSVDGLYDFRSCCGTY
TVKDGLPLNPMGRTGLRGVGSLRWFGPNNSLHPVLTRWNMSSANGTIRKASKNMLEVLIV
RRRDNELWSLPGGTLDPGQQIPIKLQALLKHTYLGQFLALLGSAEEVFHGYLDDPRNTDN
AWIETLAVNVHLDKSEDFDNLMQNLKESDDEITLRWQLLDHKIPLYANEKEILQRTAEHL
HVQY
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atggggaatacaaaaagtaaagccaatggaaaggatcaagtggatggcatacagcatcac
caccaagccaacttacatcaggccaatttacgttccccataccgacccatgactgccgat
gccaagaaaaagaagaagactaccccacttgtcctggatggagccaagattggtgacctt
aattcctgggtttcaaaacatattaagaaaaaagagtgcgttgttttcatcccacaagag
tctagcaatggggagacctgtggatgtggttacaccagagaattccatgacatctcaagt
atttctgtaccgcctgaaaccaagtgggaccctcacaagcatgtcacagaatttcccagc
gattcacatggggacatgacatttacaggaaccaccaggacctgggccaagtatgtgcgc
gcatcctgcgacactcctccaagaagattatttcagctgatgacagagcagtgggagctt
cgtgtaccaagtcttctcatatctgtgacaggaggagccaaaaacttcaacatcagtcca
aggctgaagacccagtttagtcggggccttgtgaatgctgcacaaagcacaggggcctgg
atcatcacaggcgggtctcacgctggggtcatgaagcacgtaggggaagccgtacgagat
ttcagtggaggcgaaaaagactctgagattgtcctgataggcattgccacctggggcatc
gtccacaaccgaaaatcactactcagcgaagcggggggagctcctgccctgtaccccatg
gatgaaggatcacaggggaggctgtgctgtctggacaacaatcacacacacttcatactg
gtggatgatgggacacatggacgctatggggtggaaatcccactgagaactcgcctggag
aaatttatctctgaacagacaatgcaaagaggaggaaccgccattaaaatccccatagtg
tgcgtggtgctggaaggaggtcccggaacattggacaccatctacagttcaatgtgtaac
aacacaccgtgtgtcattgtggagggatctggtcgagttgctgacatcatagcacaagtg
gcgaatcttagttcctccaggattaccatcaacctcattaaggagaagctgcaaaatctt
ttctctgagtcctatgacagttttacagaagatcaaattatcatgtggaccaagaaaatt
caagatattgtccgcatggggtctctgctcactatcctccgagagcagaaggctggcgat
caagggatggatgtggcaatcctgcaagctttgctgaaagcctcccacaatgctgatcac
aatggccaagagaactgggaccatcagctgaaactcgccgtatcctggaatcggtcagac
attgctgagactcagatctttactaaagactggacctggaagccctccgatctgtatccc
agcctgacgttgtcattaattgaagacaagccttcatttgtgcgcctgttcctggagcgt
ggagtcaatctggcggagtacctcgatagggacactctcaccgaattgtacaacagtaca
gacccatccagtttgattcacagcaaacttgagagggaagccacagtggagggatcaaag
gaagttgttgtatctaccatagaacttcatcacgtctcccgtgtcctacaggatcttctg
ggagatctaaccgagcccctataccgagatgcaaagcgtaagctaaggaacctggcgcat
gtcaacatcaagataaatgggaaagtgggagctatgaaacacaagaactcccagaagttg
aaacaccctgtgagggatcttctcatctggtgcattgtgcagaaccgagcagagatggca
gacatcatctggaatctgactcaggatagtgtagctggagccctggcctgcaccaagatc
ctaaaggctctctctaaggaggaggaagactctaaggaaatcgaggacatgacagcactt
gccgacctttatgaggaacgagctgcaggagtgttctctgaatgttatcgtagtgatgag
aaacgggcagaacttcttttgatccatgtctcccacaattggggaaggaccaccgccctg
gaattggctcaaagttctcaagctctgtcctttatgtcacaaggaggtgtccagacattc
ctcacaaggacctggtgggggaaactttccgtggacaatggcttcatccagcttttgctg
tgtatgatgctcttccctctaatctacagcaacttcatcatcacctacaggaaaggcttt
acaaatgttccctctttccttgatggaagtcggagaaatcgaagtatccgccaagatacc
agaatcaaatcgaaaggacttaaaccgtacagctggttctggaagcttcaagctttcttc
actgctccgaatgtgaaattctattataacgttgtgtcatacgttggatttttgtggctt
tttgcatatgttctgacaactgacttccagacctatccatcctggagggaatatttattg
tacgtttgggtcttctccatctttactgaggagctacgtcagctgttttatgacccggag
cgtcgtggctttttgaagagttctgcccaatacatttcagagttttggaaccaggtggat
tcgctggctttgacgttattcgctgttgggctgatatgcagattggttcggacagacatt
gacactgtctatctgggtcgggtgttcctgtctgtagacttcatgatattctgcatccgc
ctcatgcacatcttttcggtcagcaaagttcttggtcctaagattatcatcctccagaga
atggtcaaagacatcttcttcttcctcttcctcctggctgtgtggattgtgtcgtacgga
gtggcgaagcaggcgattctaaccaccaacgaagaaaggttggggtggattttccgcaac
gtgatctatggaccctacctcaccctctttggtcaaatcccatcagaaatagatagttta
aattttgacacgacaaaatgtacacaaaatggcactgacccgggcttgccaaaatgtgtc
gtcaatgatggaaccaacgctctgttcccggagtggttgaccataattcttatgtgccta
tatctcctcctggctaacatccttctgctcaatctacttattgcaatgttcagttacaca
ttcgcagatgtggaaagtcacacggatcaggtctggaaattccaccgatttggtctcatt
aaagaatataatgagcgtcccgcggctcctcctccattcatcctactcacgcacttacat
gatcttgtgaaacacgcaatttgtggatatccggcccatggccacaaagttctaaggcgg
gacctagaccaagaacaagaggcttcgctgctctcctgggagtccttcatgaaggacaac
taccagcagatgaagcaacagcaagatgatgatagccaggagaatctggtgaaagggaca
gctgatagtgtctccgccgtgctgcgtctgatgaaaattgagaagggcagcgagggatac
cagctggagggaaggcttactgagctggaaaagcagatggatcagtctacacactttctg
aattggatcatctccgccttgatggagaaaggtttcagcagtaagacacggctattagtc
cacagcagttcacaggaagaaaagtttgcagcaggcacagatggacgggccgaaccgcac
tgtctgtaccacgtgaactctcggatcctgcactacccgggctctaaaatgaaccgctac
ccagtgcctgatgagctggtgccatgggaggtggaattcccaggatataatcctccccta
tacaacgctgataggaatgaccgcgggacgtatgacccaaacactgagatggagcagaag
agccgcaagtacaattctgtagacggactctatgacttccgcagttgttgtggcacctat
acagtcaaggatggtttgcccctaaacccgatgggacgaactggactgagaggagttggg
agtctacggtggtttggaccaaacaattccttgcaccctgtactgacacggtggaacatg
agctcagccaacggaaccatccgaaaagcatccaagaatatgctggaagttctgatagtg
aggaggagagacaacgagctttggtcattaccggggggcacgctggatcccggacagcaa
atacccattaagttgcaggccctgctgaagcacacatacctcggccagtttctggcatta
ctgggctctgcggaagaggtcttccacgggtacctggatgaccctcgaaacacagacaat
gcctggatagagactcttgctgtcaatgtccacctggacaaaagcgaggattttgacaat
ctgatgcagaacctgaaggaatcagatgatgagataacactgcggtggcaactcctggac
cacaagattcctctgtatgccaatgagaaggagattctccagaggacagccgagcacctc
catgtccaatattaa
DBGET
integrated database retrieval system
