Rana temporaria (common frog): 120929040
Help
Entry
120929040 CDS
T07929
Name
(RefSeq) collagenase 3-like
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtem01002
]
120929040
Peptidases and inhibitors [BR:
rtem01002
]
Metallo peptidases
Family M10
120929040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
DUF4953
Reprolysin_5
Peptidase_M66
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
120929040
NCBI-ProteinID:
XP_040196160
LinkDB
All DBs
Position
2:complement(57012514..57038586)
Genome browser
AA seq
477 aa
AA seq
DB search
MKKANMTSAMLRVVVLLVGLGCCLSVPIPQEDSAEFTNNDLRLAQKYLSTLYSSSANPAG
ILRRSGGKTVQAQLKDMQSFFGLEVTGKLDEETLDIMKQPRCGVPDIGEYNFFPRKLKWP
RLDLTYRINNYTPDLPRADVDRAIKKAFKVWSDVTPLNFTRLRSGTADIMISFGRNEHGD
FYPFDGPNGLLAHAFPPGEKLGGDTHFDDDEYFTNDYKGYNLFIVAAHEFGHALGLDHSR
DPGSLMYPVYSYAESSSFILPDDDVQGIQELYGAGNKDPNHNHPKTPEKCDPELEIDAVT
ELRGEKFIFKDRFFWRVHPQMTDAELTVIKSFWPELPSKIDAAYENPQKDLVYIFRGKKV
WAINGYDIVNGYPKKLHELGLPKTLKSIDAAVHNDASGKTLFFTGNKYWSYDEESMTWDK
GYPRPIADDFMGIGEKVDAAYRKNGYIYFFTGPLQYEYSIWSKKVTRVMKTNSILWC
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcaaacatgaccagtgcaatgctgagagttgtagttctgctggtcggattg
ggctgttgtctctcagtccctattcctcaggaagacagtgcagagttcaccaacaacgac
cttcgcttggcacagaaatatctcagcactttgtatagttcttctgctaacccagctgga
attctgaggcgtagcggtggtaaaactgtccaagctcagctgaaagacatgcagtcattc
ttcggcctggaagtgacaggaaaactggatgaggagaccttagacatcatgaaacagcca
agatgtggagttcctgatatcggcgaatacaacttcttcccacggaagctcaaatggccc
agactggatctcacatacagaatcaataactacacccccgatttaccccgtgcagatgtg
gatagagctatcaaaaaggcttttaaagtatggagtgatgtcacccctttaaatttcacc
agactgcgctctggcactgccgatatcatgatatcctttggaaggaatgaacatggcgat
ttctatccctttgatggccccaatggcttgttggctcatgctttcccccctggtgaaaaa
cttggaggggacacccattttgatgatgatgaatatttcaccaatgactataaaggatac
aatctgtttatcgtggcagctcacgaatttggccatgccctcggtctggaccactccagg
gatccaggatcgcttatgtatccagtttattcatatgctgaaagtagtagcttcatcctt
cctgacgatgatgtacaagggatccaggaactatatggagccggaaacaaagaccccaac
cacaatcatccaaaaactcctgagaagtgtgatcctgagctggagatcgatgctgtgact
gaactcagaggagaaaagtttatctttaaagacagattcttttggagggttcacccacag
atgacagatgcagagctgactgtgattaaatctttctggccagaacttcccagtaaaatt
gatgcagcatacgaaaacccacagaaggatcttgtgtatattttcagaggaaaaaaagtg
tgggctataaatggttatgatatagtgaatggatatcccaaaaaactgcatgaacttgga
ctgccaaaaacgttgaagtctatagacgctgctgttcataatgatgccagtgggaaaact
ctattctttacagggaacaaatattggagttatgatgaagaaagtatgacttgggataaa
ggctaccctagacccattgcagatgacttcatgggaattggagagaaagtcgatgcagca
tataggaaaaatggttacatttactttttcactggaccccttcagtatgaatacagcata
tggagcaaaaaagtcactcgtgtaatgaagaccaactctatcctgtggtgttag
DBGET
integrated database retrieval system
