Rana temporaria (common frog): 120932110
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Entry
120932110 CDS
T07929
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120932110 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120932110 (TDG)
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
120932110 (TDG)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120932110 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
120932110
NCBI-ProteinID:
XP_040200184
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All DBs
Position
3:218109878..218139248
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AA seq
457 aa
AA seq
DB search
MRTTPSSTWPYILQQIHIALLEWNYYAFQQGQAFYGYPYHQMMNASPNMELGNEQRTLHT
LTDVPPHELQAFSGMLGNENQMFHSMNGVYGTEPMKMQATEAPEPPQETQEGATKGKRKR
KAPAEPKPKPEPKPKKQPAKSAKTPKSGKQEKITDTFKVKRKVDRFNGVPEADILAKTLP
DILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFLSGLSDKQLNHLDDLALPEEY
GIGFTNMVERTTPGSKDLSSKEFREGGRILLQKLQKYKPRIAVFNGKCIYEIFSKEVFGV
KIKKFDFGVQPHRVPDTDTICYVMPSSSARCAQFPRAQDKVHHYIKLKDLRDHLKGIESA
REVQEVQYSFDLQLAQADAKKQAVKEEKHDPGYDEAAGGNSNEQIPNGDSGSCNLPNLEA
PCNSESVQNGQPPSQPHTEHVSAPNHCEDQPQESSSA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcgcactacaccttcctccacctggccttacatcctgcagcagatccacatagctctc
cttgagtggaactattacgccttccagcaaggtcaggcgttttatggttacccataccat
caaatgatgaatgcttcaccaaatatggaactgggcaacgagcaaaggactctgcacacc
ctcacagacgtcccaccccacgagctgcaagcattttctggcatgcttggtaacgagaat
caaatgtttcatagtatgaatggtgtatacggcactgagcccatgaaaatgcaagcaaca
gaagccccagagcctccacaggaaacacaagaaggtgcaacaaagggtaagaggaaaagg
aaagctccagctgaacctaaaccaaaaccagaacctaaaccaaagaagcaacctgcgaag
agtgccaagaccccgaaatcaggaaaacaagagaaaatcacggacactttcaaagtgaaa
aggaaagtggaccgattcaacggggtacctgaagctgacattttggcaaaaactttgcca
gatattcttacatttaacttggacatagttattattggaataaacccaggtctcatggca
gcttacaagggtcatcattacccaggtcctggaaaccatttctggaaatgtctgttccta
tcggggctcagtgacaagcagttgaaccaccttgatgaccttgcgcttccagaggaatat
ggcattggcttcactaacatggtggagagaaccactccagggagcaaggacctctctagc
aaagaatttcgggaaggtggaagaatccttttacagaagcttcagaagtataaaccacgt
atagctgtcttcaacggaaaatgtatatatgaaattttcagtaaagaagtatttggtgtc
aagattaaaaagtttgattttggagtccagccacacagagttcctgatacagatacaatt
tgctatgttatgccttcttcaagtgccaggtgtgcacagtttccccgtgctcaggacaag
gtacatcactacatcaaattaaaggatttaagagaccatctaaagggcatagagagcgcc
agagaggttcaagaagtgcaatattcatttgacttgcaattggctcaggcggatgcaaag
aagcaggctgtaaaggaagagaagcatgatcctggctatgatgaagctgctggcggcaat
tccaatgagcagatacctaatggagacagcggatcatgcaacttgcctaacttggaagca
ccctgtaactcggagtctgttcagaacgggcagccgccgtctcagccccatactgagcac
gtgtctgcgcctaaccactgtgaggaccaaccacaagaaagcagcagtgcttaa
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