Rana temporaria (common frog): 120932497
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Entry
120932497 CDS
T07929
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtem04515
]
120932497
Cell adhesion molecules [BR:
rtem04515
]
Cadherins
Protocadherins
120932497
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Glyco_hydro_6
Motif
Other DBs
NCBI-GeneID:
120932497
NCBI-ProteinID:
XP_040200880
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Position
3:316729505..316732195
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AA seq
772 aa
AA seq
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MDIRDCCLCWKWQVAFSLLLCSWGWVSGQLRYSIVEESDPGTWVGNVAQDLGIKRAEISL
RRLHLSSVKYQKYFTISRENGGLAINDRIDRELMCGSSVHCVLSLEVVAENPLEFFSLDI
EIQDINDNSPIFLSNKRNIEITELIASPGDRFSLDIAKDLDVGINGVSQYILNTNPYFSL
SVKNRKDGTLIPQLILEKVLDREEKQEHNLILTAIDGGELSRSGSCHITITVLDINDNRP
VFDRPVYKINLRENIPLNTVILTLNASDLDEGENGEILYYVDEHTSESAREKFALNEQNG
QIYINGSVDFEEVHFYEISIKAVDKGLPKLEGDCVVHIEVEDVNDNYPEISFASMANEIP
ENAPLATTVGFIIVVDKDSGKNGEIQLDVTPNIPFKIRSIKNRYLLVTDGILDKEKLSQY
SIELTASDLGSPVLSSKTTVILRVSDVNDNAPIFLQSTYNAFIKESSDPGTLLCTVSATD
ADEGVNADLVYSVVETQIDGSSVSSFVYINSNNGDIYAQRSFDYEHIQILQITMKVEDSG
SPKLLSTVPVFIFILDTNDNSPTLLYPEHSEDLIVQERIPKSITAGYLVTKLTAVDLDSG
HNAWLAFNLIDPGSSSLFQVSKHTGEVRTVRGFQETENTEQQIIISIIDHGDPPLSTTIT
VLVSIADDVVVERPKSGDFLRNSKPPSDMTLYLIVSLVAISLVSLVTFFILLVKCLRKES
YGYSSSCCYLNGSESKSYMDQYQPALFLNTWNPKIHGGQDGSSRGTRTMLSN
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggacatcagagactgctgtctgtgttggaaatggcaagtagctttctcccttctcctt
tgtagctggggctgggtctctgggcagcttcgttattctattgtggaggagtctgatcca
gggacatgggtaggaaatgtagctcaggatctgggaataaaacgtgcagagatttctctg
cgcagattacatttatcatctgtgaaataccaaaaatattttactataagtagggaaaat
gggggtttggctattaatgacaggattgatagagagcttatgtgtggatccagtgtgcat
tgtgtgctaagtctagaggtggttgctgaaaaccctttagagtttttcagcttagacata
gagattcaggatatcaatgataactccccaatatttttatctaataaacgcaatattgag
attacagagttaattgcaagtcctggtgataggttttccttagatattgctaaggatttg
gatgtgggtattaatggtgttagtcagtacatattaaatacaaatccttatttttcattg
tctgtaaagaatcgtaaggatggcactctcatccctcagctgatattagagaaggtgtta
gatagggaggagaaacaagaacacaatcttattctcactgctatagatggcggagaactg
tctagatcaggatcctgtcatatcacaataacagtgttagatattaatgataatcgacca
gtctttgatcgaccagtatacaagatcaatctaagggaaaatatccctttaaatacggtt
atattaactttaaatgcttcagatctggatgagggagaaaatggtgaaatactgtattat
gttgatgaacacacatcagaatctgctagagaaaaatttgctctgaatgaacagaatggt
cagatttatattaatggatctgttgattttgaggaagtacatttttatgaaatttccatc
aaagcagtagacaaaggactccctaaactggaaggtgactgtgtggttcatatagaagta
gaagatgtaaatgacaattatcctgagatttcttttgcttccatggcaaatgagattcca
gaaaatgctcctttggcaactactgttggatttattattgtggtagataaggattctggg
aaaaacggagagatacaactggatgtaactcccaatattccatttaaaatcagatctata
aaaaatcgttatttattggtcactgatggaattttggataaagaaaaattatctcaatac
tctatagaactgacagcttctgatttaggatctccagttttgtctagcaagacaactgtc
attctcagggtttctgatgtgaatgataatgcaccaatatttttacagtctacttataat
gcttttattaaggaaagcagtgacccaggaactcttctgtgcaccgtgtctgctactgat
gcagatgagggggttaacgctgatctggtatactctgtagtggaaacccagatagatgga
tcatctgtatcttcttttgtttacataaattctaataatggtgatatatatgctcagcgt
tcctttgactatgagcacattcagattctacaaattacaatgaaagtagaggattctgga
tctccaaagttactttctactgtccctgtctttatattcatattggatacaaatgacaat
tcccccaccctgttgtacccagaacactctgaggatctcattgtccaagagaggattcca
aaatctataactgctggatatctggtgacaaaactgactgcagttgatctggactccggt
cacaatgcctggttggcctttaacctcattgaccctggtagttcttctctattccaagtg
tctaaacatacaggagaggtcaggactgtacgaggatttcaggaaacagaaaatacagag
cagcaaattatcatttctattattgaccatggggatcccccattatctactactattact
gtacttgtaagtatagcagatgatgttgtagtagaaagacccaaatctggagatttcctc
agaaattccaaacccccatcagatatgactttatatttaattgtttctcttgtggctatc
agtttagtttcccttgtgactttcttcatattattagtgaaatgtctaagaaaggaaagt
tatggttatagcagcagttgctgttatcttaatggatctgaatcaaaatcatacatggat
cagtatcagccagctcttttcctgaacacatggaaccctaaaatacatggaggtcaggat
ggttcctccaggggtacaaggacaatgttatcaaactaa
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