Rana temporaria (common frog): 120932534
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Entry
120932534 CDS
T07929
Symbol
SQSTM1
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04137
Mitophagy - animal
rtem04140
Autophagy - animal
rtem04217
Necroptosis
rtem04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120932534 (SQSTM1)
04137 Mitophagy - animal
120932534 (SQSTM1)
09143 Cell growth and death
04217 Necroptosis
120932534 (SQSTM1)
04218 Cellular senescence
120932534 (SQSTM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120932534 (SQSTM1)
03029 Mitochondrial biogenesis [BR:
rtem03029
]
120932534 (SQSTM1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtem04147
]
120932534 (SQSTM1)
Membrane trafficking [BR:
rtem04131
]
Autophagy
Mitophagy
Cargo receptors
120932534 (SQSTM1)
Pexophagy
120932534 (SQSTM1)
Aggrephagy
120932534 (SQSTM1)
Xenophagy
120932534 (SQSTM1)
ER-phagy
ER-phagy recepters
120932534 (SQSTM1)
Other autophagy associated proteins
Midbophagy
120932534 (SQSTM1)
Mitochondrial biogenesis [BR:
rtem03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
120932534 (SQSTM1)
Exosome [BR:
rtem04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120932534 (SQSTM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Gp44-like_2nd
Motif
Other DBs
NCBI-GeneID:
120932534
NCBI-ProteinID:
XP_040200921
LinkDB
All DBs
Position
3:complement(328923688..328938473)
Genome browser
AA seq
443 aa
AA seq
DB search
MSVTVKAYLLGKDETHREIRRFALELGKGKSADPGSSCELLIRKVTDVFQGLRGGAFQMF
YRDEEGDLVAFSTDEELNMGLENLNEGVFRVYIKERKDCKREHRAHCGQETPQNVVHPNV
TCDGCEGAVVGNRYKCLICPDYDLCSTCEGKGIHKEHNMIMFPTPIPFPRGRWFRKMHHG
VPPFNWMNGWGYPGTGFHCPNSQQTGCNPEQCQTPPAEGTAPSSSQPSPDPNVTFLQNVG
ESVAALLSPLGIDVDIDVEHGGKRSKIATPPSGSEAKDSQPNSSSFTSHPQNVNSRPENE
ECMDTDAIAKRMKDVSLNPSVQNENEQSEHNSNASGGEDDWTHVSPKEVDPSTGELQSLQ
PDTEEPSSLDPNRPIHAPTGLREAAIYPHLPAEADPQLIETLSQMLSMGFTDEGGWLTRL
LEAKQYDIGSALDAMKSVRNLPQ
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcactgtgaaggcctatctgctggggaaggacgagacccatagggagatcaga
cgcttcgcactggagctgggcaaagggaagtctgccgacccgggatccagctgtgagctg
ctcatcaggaaggtgactgatgtcttccaaggcctgagagggggagccttccagatgttc
tacagagatgaagagggggatctggttgccttctccactgatgaggagctgaatatgggt
cttgaaaatcttaatgaaggcgttttccgtgtctacattaaagaaaggaaagactgtaag
cgtgagcaccgtgcacactgcggacaggagactccccagaatgtggtccaccctaatgtg
acctgtgatggatgtgaaggtgctgtggtggggaaccggtacaagtgcctgatttgccca
gattatgacctgtgcagtacctgcgaggggaaaggaatccataaggagcacaacatgatt
atgttccctactcctattccttttcctcgtgggcgctggttccgcaagatgcatcatgga
gtgccacctttcaactggatgaatggctggggttaccctggcacaggctttcactgccca
aattcccagcaaacagggtgtaacccagaacaatgtcagactccacctgcagaaggtact
gctcctagttcttctcagccatctcctgatcctaatgtcaccttcttgcaaaatgtcggt
gaaagtgtggcagccttgttgagtccccttggaattgatgtagacattgatgttgaacat
ggtggtaaacgcagcaagattgcaaccccgccatctggttctgaagctaaagattcccaa
ccaaacagctcatccttcacttcacaccctcagaatgttaacagcagacctgaaaatgag
gagtgtatggatacagatgccattgctaaacggatgaaagatgtttctttgaacccctct
gttcaaaatgaaaatgaacaaagtgaacacaacagcaatgcatcaggtggtgaggatgac
tggactcatgtctcccccaaagaggtggacccgtcaactggtgagctacagtcccttcaa
ccagacacagaggaacccagttctttagacccaaacagacccattcatgctcccacaggt
ctcagagaagctgctatttatccacacctcccagcagaagcagatcctcagctcattgaa
acactatcacagatgctgtccatgggtttcacagacgagggaggctggctcacgaggcta
ctggaagcaaaacaatatgacattgggtcggctctcgatgccatgaagtctgtgcggaat
cttcctcaataa
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