Rana temporaria (common frog): 120932711
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Entry
120932711 CDS
T07929
Symbol
CACNA1C
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C isoform X1
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04010
MAPK signaling pathway
rtem04020
Calcium signaling pathway
rtem04260
Cardiac muscle contraction
rtem04261
Adrenergic signaling in cardiomyocytes
rtem04270
Vascular smooth muscle contraction
rtem04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120932711 (CACNA1C)
04020 Calcium signaling pathway
120932711 (CACNA1C)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
120932711 (CACNA1C)
09153 Circulatory system
04260 Cardiac muscle contraction
120932711 (CACNA1C)
04261 Adrenergic signaling in cardiomyocytes
120932711 (CACNA1C)
04270 Vascular smooth muscle contraction
120932711 (CACNA1C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtem04040
]
120932711 (CACNA1C)
Ion channels [BR:
rtem04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120932711 (CACNA1C)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
Gag_p17
DUF4834
Motif
Other DBs
NCBI-GeneID:
120932711
NCBI-ProteinID:
XP_040201252
LinkDB
All DBs
Position
3:361923695..362459518
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AA seq
2132 aa
AA seq
DB search
MVNESRTMYIPEGDHQGSNYTNPLPALGTMNSTPGLATEHIPTPGAALSWQAAIDAARQA
KLMGSAANATISTVSSTQRKRQQYSKQKKQGATTATRPPRALLCLTLKNPIRRACISIVE
WKPFEIIILLTIFANCVALAVYIPFPEDDSNATNSNLERVEYLFLIIFTVEAFLKVIAYG
LLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKADGGSALGGKGAGFDVKALRAFRVL
RPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTCYFLV
NKDVPSEEEPSPCALPSNNGRHCPNETLCDSGWDGPKHGITNFDNFAFAMLTVFQCITME
GWTDVLYWMQDAMGYELPCVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQK
LREKQQLEEDLKGYLDWITQAEDIDPENEDEDIDEDKPRNMSMPTSETESVNTDNVGSGD
VDEEGCGVRLAHRISKSKFSRYWRRWNRFCRRKCRAAVKSNVFYWLVIFLVFLNTLTIAS
EHYNQPDWLTEVQDTANKVLLALFTAEMLLKMYSLGLQAYFVSLFNRFDCFIVCGGILET
ILVETKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLFII
IFSLLGMQLFGGKFNFDEMQTRRSTFDNFPQALLTVFQILTGEDWNSVMYDGIMAYGGPS
FPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEEKERKKLARTAS
PEKKHEKETIGKSPVPAVEENKEKIELKAITADGESPPATKINVEDHPSNENDEKSPYPS
SNENPGGEEEEEEPEMPVGPRPRPLSELHIKEKAVPMPEATAFFIFRQDNKFRLHCHRIV
NNNIFTNLILFFILLSSISLAAEDPVRHYSFRNQILGNADYVFTSIFTLEIILKMTAYGA
FLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKILRVLRVLRPLRAINRAKGLKH
VVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKLYSCTDSSKITEAECRGRFISYK
DGDVSQPMVQDRNWENSKFDFDNVLAAMMALFTVSTFEGWPELLYRAIDSHTEDIGPVYN
HRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALKAR
PLRRYIPKNQYQYKVWYVVNSTYFEYLMFVLILLNTICLAMQHYGQSCSFKEAMNILNML
FTGLFTVEMILKLIAFKPKHYFCDAWNTFDALIVVGSIVDIAITEINTGEHSQCHNMQGE
ENSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIG
MQVFGKIALNDTTEINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPNKMCDRNSESP
PLLEDDYSCGSSFAVFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFK
RIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMF
NATLFALVRTSLCIKTDGNLEQANEELRAIIKKIWKRTSMKLLDQVVPPAGDDEVTVGKF
YATFLIQEYFRKFKKRKEQGLVGKPSQRTTLSLQAGLRTLHDIGPEIRRAISGDLTAEEE
LDKAMKEAVSAASEDDIFRRAGGLFGNHVGYYQSEVRSAFPQTFTTQRPLHINKTSAGPG
DIDSPSHEKLVDSTFTPSSYSSSGSNANINNANNTALVCLPNLPAYQSTVSTVEGQSCPL
RTHGSWKISSKRTCHHKGWGRSVSRDSRLPIICREEASQDETYDASEEVEYNSEPSLLCS
DMFSDQDEESRQLTPSEGEVERGLCPSPKRSFLRSASLGRRASFHLECLRRYRNQGGDAS
PKAVLPQLHLVHHQALAVAGLSPLLRRSHSPTAFSRLCSTPPATPCSRGWAQQTVPAVRL
HGDPGSKENVHSSFPSVHCSDCSLGRDRPASLTVPCHVREQTRQHHGSASSLVEAVLISE
GLTQFAQDPHFLQVATHELADACDMTIEEMESAADSFLNGKPSPNRKLSPFPKRRDQGVD
CAGGGSEEPELSPGCRNSKGESEDCRVYMSSP
NT seq
6399 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatgaaagccggacaatgtacatcccagagggagaccaccaaggctctaactac
acaaaccctcttccggcattgggcaccatgaactccacccctggccttgccacggagcat
atccccaccccaggtgctgccctctcctggcaagctgccatcgatgccgcccgacaggcc
aagttaatgggcagtgccgccaatgccaccatatccacggtcagttctacgcagaggaaa
aggcagcagtacagcaagcaaaaaaaacagggagccacaacagcgacacggcccccgcgg
gcgctactctgcctcaccctgaaaaaccccatccgcagagcctgcatcagcatcgtagaa
tggaaacccttcgaaatcattattttgctgactatttttgccaactgtgtggccttagct
gtctatatccccttccctgaggacgactccaacgccacaaactccaacttggagcgggtg
gagtacctcttcctcatcattttcacagtggaagctttcctcaaagtcattgcatatggg
cttctctttcaccccaacgcatacctccggaatggctggaacttgctggatttcatcatt
gtggttgtagggctttttagtgcaattttagaacaagcaacaaaggcagatggtggcagt
gcccttggagggaaaggggcgggcttcgatgtgaaggcactgcgagcattcagagtgctg
agacccctgaggctggtatctggggtacccagtctacaggtggtgctgaattctatcatt
aaggccatggtgccgctgctgcacatcgccctgttggtgctgttcgtcattatcatttat
gccattatcgggctggagctgttcatgggcaagatgcataaaacctgctacttcctggtc
aacaaagacgtcccttcagaagaggagccctcgccctgtgcccttccaagcaataatgga
cgccactgtcccaatgagaccctctgtgattctggctgggacgggcccaagcacggaatc
accaattttgacaactttgcatttgccatgctcaccgtcttccaatgcattaccatggag
ggctggacagacgtactctactggatgcaggacgccatgggatatgagctgccctgtgtg
tactttgtcagccttgtcatctttggatcgtttttcgttctgaatctggttcttggtgtg
ctgagcggagaattttcaaaggagcgagagaaggccaaggcccggggtgatttccagaag
ttgagagagaagcagcagctagaggaggacttgaaagggtatctagactggatcacacag
gctgaggacatcgatcctgagaatgaagacgaggacatagatgaagacaaaccacggaac
atgagtatgccaaccagtgagacagagtctgtgaacactgacaatgtaggcagtggcgat
gtggacgaagaaggctgcggagttcggttggcgcacagaatttccaagtctaaatttagc
cgttactggcggcgatggaaccggttttgtcgaaggaagtgccgggcagcggtgaagtct
aacgtcttctattggctggtgatttttctggttttcctgaacacgctgaccattgcttcc
gagcactacaaccaacctgactggctcaccgaagtacaagatacagcaaacaaggtcctc
ctggcactcttcaccgccgagatgctcctgaagatgtacagtttggggctccaggcatac
tttgtctccctattcaaccgattcgactgcttcatcgtctgtggggggattctggaaacc
atattggtagagaccaaaatcatgtcccctctgggcatctctgtcctacgctgcgtacgt
cttctcaggatattcaagattaccaggtactggaattccctcagtaatctggtggcctct
ctgctgaattctgtgcgctccatcgcttccctgttgcttctccttttcctcttcatcatc
atcttctccctgctggggatgcaactcttcgggggaaagttcaacttcgacgaaatgcag
acccgccgcagcaccttcgacaacttcccgcaggcactgctcactgtcttccagatcctt
actggagaggactggaattcagtgatgtatgacgggataatggcatacggcggaccctca
tttcctgggatgctcgtctgcatctatttcataatcctcttcatctgtggaaattatatc
ctcctgaatgtcttcttggccattgctgtggacaacctggccgatgctgaaagcctgacc
tctgctcagaaggaggaggaggaagagaaggagcggaagaaacttgctcgaacggcgagc
ccagagaagaaacatgagaaggagacgattggaaaatctccagttccagctgtggaggag
aacaaagagaagatcgagctgaaggctatcactgcagatggcgaatcacctcctgctacc
aagattaatgtggaagatcatccatccaatgaaaatgatgagaagtctccataccccagc
agcaatgaaaacccagggggggaagaggaagaggaggagccagagatgcctgttggccct
cgtcctcgtccactgtctgaactgcacattaaggagaaggctgttcccatgcccgaagca
accgctttcttcattttccgtcaggacaacaagttccgcctccactgtcaccgtattgtc
aacaacaacatctttaccaacctgatcctcttcttcatcctcctaagcagcatatcactg
gcagccgaagaccccgtgagacactactccttcaggaaccaaatcctagggaacgccgac
tatgtgttcactagcattttcacattagaaatcatcctgaagatgacggcttatggtgca
ttcttgcacaagggctccttctgcaggaattacttcaacatcttggacctgctggtggtc
agcgtttcactcatctcctttggcatacagtccagtgccatcaatgtggtgaagattttg
agggtcctcagagttttgcgaccactcagagccatcaacagagccaaagggctcaagcat
gtggtccagtgcgtattcgttgctattcgcaccattggaaatattgtcatcgtcaccact
ctactacagtttatgtttgcctgcattggagtacagctgttcaagggcaagttgtacagc
tgcacagacagctcgaagattacagaagccgagtgcagggggaggttcatcagctacaaa
gatggcgatgtgtcacagccaatggttcaggaccggaactgggaaaacagcaagtttgac
tttgataacgtcctggcggcaatgatggcacttttcaccgtctccacctttgaaggctgg
ccggagctgctatacagagccattgactctcacacagaggatattggccccgtctacaac
caccgtgtggagatctcaatcttcttcatcatctacatcatcattatcgccttcttcatg
atgaacatcttcgttggtttcgtcattgtgaccttccaggagcaaggagagcaggaatac
aagaactgtgagcttgacaagaaccagcgacagtgtgtggagtacgccttgaaggcccgg
cccttgcgcaggtacatccctaagaatcagtaccaatacaaagtgtggtacgttgtcaac
tctacctattttgagtacctcatgttcgtgctgatcctcctcaacaccatctgcctggcc
atgcagcactatgggcagagctgttccttcaaggaagccatgaacatcctcaatatgctg
ttcaccggcttgtttacagtggagatgatcctgaaactcattgcttttaagccaaagcac
tatttctgtgatgcatggaacacatttgatgcacttatagtagtgggtagcattgttgat
atagcaatcaccgaaataaacacaggtgaacactctcaatgccacaatatgcagggtgag
gagaactccagaatctccatcacattcttcaggctctttcgagtcatgcgtttggtgaag
cttctcagccgaggagagggaatccgcaccctgctctggaccttcatcaagtctttccag
gctcttccctatgtggctctactcattgtaatgctgtttttcatctatgctgtgattgga
atgcaagtttttgggaaaatagctcttaacgacacaacggaaattaacaggaacaataat
tttcagaccttccctcaagctgttctgctgctgttcagatgtgctaccggtgaagcatgg
caggagataatgttggcttgtcttcccaacaagatgtgtgaccggaattctgaaagtccc
ccacttctcgaggatgactactcctgtggaagcagcttcgccgtcttctacttcatcagc
ttctacatgctctgcgccttcttgatcatcaatttgtttgtcgcggtcattatggataat
tttgactatctgacgcgggattggtccatattgggccctcatcatttggatgaattcaag
cgaatatgggcagagtatgatccggaggctaaggggcgcatcaagcacctggatgtagtg
acacttctacggcggatacagcctcctttgggtttcggcaagctgtgcccgcatcgtgtg
gcgtgtaagcgtctggtcgccatgaacatgcctctaaacagcgatgggacagtcatgttt
aatgctactctcttcgctttggttcggacttctctatgcattaaaactgatggtaatctg
gagcaggccaatgaggaactcagagctatcattaagaagatctggaagaggaccagtatg
aaactgcttgaccaggtggtgccgccagctggggatgacgaggtcaccgtggggaagttt
tatgccaccttcttgattcaggaatacttccgcaagttcaagaagcgcaaagagcagggg
cttgtgggaaaaccatctcagcgcactactctctccttgcaggccggactgcgcacgctg
cacgatattgggcctgagattcgtcgtgctatttccggagatttgactgcagaggaggag
ctggacaaagccatgaaggaggcagtgtccgccgcatctgaggacgacatcttccggagg
gcgggaggcttgtttgggaatcatgtaggatattatcaaagcgaggtgcgaagtgcattc
cctcaaacctttactacacagagacctttacacatcaacaagacatctgccggtcctggg
gacatagattcgccctcccatgagaaactggtggactccaccttcactcccagcagctac
tcgtcctccggatctaatgccaacatcaacaatgccaacaacacggccctagtatgtctt
cccaatctgcctgcctaccaaagcacagtcagcactgtagagggacagagctgcccgctg
cgcacacatgggtcctggaaaatcagctctaagaggacatgtcaccacaagggctgggga
cgttcagtgtcccgggacagccgactgccgatcatctgccgtgaggaagcatctcaggat
gagacatatgatgccagcgaggaggtggagtacaacagtgagccgagcctcctatgctca
gacatgttctcagatcaagatgaggagagccggcaattgaccccatcagagggagaagtt
gagagagggctgtgtccatctcccaagagaagcttcctgcgttctgcctcattgggcagg
agggcctcattccatttggaatgcctgagaagataccggaatcaaggtggggacgcatca
cccaaagccgtattaccgcaacttcacctggtgcaccatcaggcattagcggtggccggc
ctcagtcctctgctacggaggagtcactcgccgactgcgttttcccgcctttgttctact
ccacccgccacgccctgctcacgagggtgggcacaacagactgtgccagcagtgaggcta
catggagacccggggtccaaagaaaatgtacacagcagcttcccctctgtgcactgcagc
gactgcagccttgggcgggaccgtcccgcctcccttacagtcccgtgccatgtgcgggag
cagacgcggcagcaccacggcagcgccagcagtttagtggaagcggtgctgatctcagaa
ggattgacgcagtttgctcaggaccctcacttcctacaagtggctacgcacgagctggcg
gacgcctgcgacatgacgatagaggaaatggagtcggctgctgacagcttcttgaatggc
aagcccagccctaataggaagctctcccctttccccaaacgcagggaccagggtgtggac
tgcgcagggggtgggtcagaagagccagaactctcaccaggctgtcggaacagcaagggc
gagtcagaggactgccgggtatatatgagcagcccatag
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