Rana temporaria (common frog): 120933319
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Entry
120933319 CDS
T07929
Symbol
LDLR
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03272
Virion - Hepatitis viruses
rtem04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120933319 (LDLR)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120933319 (LDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120933319 (LDLR)
Membrane trafficking [BR:
rtem04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
120933319 (LDLR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF_3
hEGF
EGF
ASFV_J13L
Motif
Other DBs
NCBI-GeneID:
120933319
NCBI-ProteinID:
XP_040202398
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Position
3:442058764..442092835
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AA seq
909 aa
AA seq
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METCRSSLALMLLLFHLTSAKSDVSKCERNEFQCEDGKCIPYKWVCDGNEECRDGSDESS
TTCETVTCSTQQFSCGGRVNRCIPLSWKCDNQEDCENGSDEKDCALKPCASDEQFQCKSG
MCISLEYVCDEDRDCDDGSDEEDCPAPTCNENFFGCKNSTVCIPKLWTCDGDPDCEDGSD
EENCEGKEPIKTDKPCSNLEFHCGSGECIHMSWKCDGGFDCRDKSDENHCEKPTCSPDQF
QCNDGKCIHGSLQCNREYECDDHSDEFGCINVTKCEGPNKFKCHSGECINMDQVCNGVRD
CRDWTDEPIKGCEENECMKNNGGCSDICKDLKIGYECLCPEGYRLLDGKKCEDINECEQP
DICSQICINLEGSYKCECNEGYQLDPATGSCKGIGTVAYLFFTNRHEVRKMTLDKSEYTS
FIPRLKNVVALDMEIANKRIYWSDATQRKIYSAFMDKAHNFSHHETVIGNEIHSPDGIAV
DWIHANIYWTDSNYGTVSVANTLGTKRKTLHREGLAKPRDIVVDPTKGFMYWTDWGFPAK
IEKGGLNGGARQTLVSENVEWPNGITLDMINQRLYWVDSKLHTLSSIDVAGGNRRIVIFD
EKHLAHPFGLTIFEDLVFWTDTDNEAIFSANRLTGNQIRKVAEDLLSPEDIVLYHNHGQP
DGDNWCASHHLGNGGCEYLCLPAPQIGTHPPKYTCACPDGEHLGPDMRSCVKEPVNPHAT
KVTPLPVTTTPSPVTTPTSTLLAKITSTTRRFTTVKPEPPTTKPKTTASSTTGRPVTTTG
RPVTTTGRPVTTTEKPQIAKANPELSTPELSTMSHPAENNIEVKMETSNSHTHSNAIYAV
IPVVILCLVAFGGFLLWRNWRLKNTNTIHFDNPVYQKTTEDDEIHICRSQDGGYTYPSKQ
MVSLEDDAA
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggagacttgcaggtcatctctggctctcatgctgcttttattccatctgacatctgct
aagtcagatgtttcaaaatgtgaaagaaatgagttccaatgtgaagatggcaaatgcatt
ccatataaatgggtctgtgatggcaatgaggaatgcagggacggatctgatgagtcctca
acgacatgtgaaactgtaacttgcagcactcaacagttcagctgcggtggaagggtgaac
cgatgtatccccctgtcatggaagtgcgataatcaggaagactgtgagaatggctcagat
gagaaggactgtgctctcaagccctgtgcctcagatgagcaattccagtgcaagagcgga
atgtgtatctctcttgaatacgtatgtgacgaggaccgtgactgcgatgatggtagtgat
gaagaagattgcccggccccaacctgtaacgaaaacttcttcggttgcaagaactccacc
gtctgtatccccaagctgtggacctgtgatggagatccagactgtgaagatggctccgat
gaggagaactgtgaagggaaagagccgattaagactgacaaaccctgctccaacctggag
ttccactgcggcagcggagaatgcatacacatgagctggaagtgcgatggagggtttgac
tgcagggacaagtcagatgaaaaccactgtgaaaaaccaacctgcagcccagatcagttc
caatgcaatgacggcaagtgtattcatggcagtctgcagtgcaaccgagaatatgagtgt
gacgatcatagtgacgaatttggatgtataaatgtgacaaaatgtgagggtccaaacaag
ttcaagtgtcacagcggagagtgtatcaacatggaccaagtgtgtaatggtgtgcgagac
tgcagagactggaccgatgagcccataaaggggtgtgaggaaaacgagtgtatgaaaaac
aatggcgggtgttctgatatctgcaaagaccttaagatcggttatgagtgtttatgccca
gagggctatcggctcctggatggaaagaaatgtgaagatatcaatgaatgtgaacaacct
gacatttgtagtcagatttgcattaaccttgaaggaagttacaaatgtgaatgcaatgaa
ggctaccaactagatccagcaaccggctcttgcaagggcatcggtacagtggcatatctg
ttcttcaccaaccgtcatgaagtgaggaagatgacgctggacaaaagcgagtacaccagt
ttcatccctcgtctgaagaatgtggtagctttagatatggagatagccaacaaaagaatc
tactggtctgacgcaacacagaggaaaatttacagtgcattcatggacaaagctcataac
ttttctcaccatgagactgtgattggaaacgagatccattccccggacggtattgctgtg
gattggatccatgccaacatctactggacagactctaactatggcaccgtttctgtggcc
aacacacttggaactaagcgtaaaactctccacagggaaggtctggctaagccgcgtgac
attgtggtggatcccaccaaaggcttcatgtactggactgactggggttttccagcaaag
attgagaagggaggcctgaacggtggtgccaggcagactcttgttagcgaaaatgttgag
tggcccaatggcattactctggatatgatcaatcagcggttgtactgggtggattccaag
ctgcatactctatctagcatcgatgttgctggtggaaacaggaggatagtcatattcgat
gaaaaacacttagctcatccattcggtctcaccatctttgaggatcttgtgttctggact
gatactgacaatgaagctatattcagtgccaacagactgactggaaaccagattagaaag
gtggctgaagaccttttatccccagaagacattgttctgtatcacaaccatggacaacct
gatggtgataactggtgtgcttctcaccaccttggcaatggaggctgtgaatacttgtgt
ctgcccgctccacaaattggcacacacccacctaagtacacatgtgcttgccctgatgga
gaacacctcgggccagatatgaggagctgcgtgaaagaacctgttaatccacatgccact
aaggtcacccctcttccggttacgacaacgccttccccggtcaccacacccacaagtact
ctccttgccaagattacctctacaacaaggaggtttactactgtcaagcctgaaccgcca
acaacaaagcctaagaccactgcttcatctaccacaggccgaccagtcactaccacaggc
cgaccagtcactaccacaggccgaccagtcactacaacggaaaagcctcaaattgctaaa
gcaaatcccgaactctctaccccagaactttctacaatgtcacatccagctgaaaataac
attgaggttaagatggagacttcaaattcccatacccattccaacgctatttacgctgtc
attcctgttgtcatcctctgcctggtcgcttttggaggtttcctgttatggaggaactgg
aggttaaagaacaccaacactatccactttgacaatcctgtgtaccagaaaaccacagaa
gacgatgagatccacatatgcagaagtcaggatggtggatacacatacccatcgaaacag
atggtgagtttggaagacgacgctgcttga
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