Rana temporaria (common frog): 120937470
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Entry
120937470 CDS
T07929
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00900
Terpenoid backbone biosynthesis
rtem01100
Metabolic pathways
Module
rtem_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120937470 (GGPS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rtem01006
]
120937470 (GGPS1)
Enzymes [BR:
rtem01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
120937470 (GGPS1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
120937470 (GGPS1)
2.5.1.29 geranylgeranyl diphosphate synthase
120937470 (GGPS1)
Prenyltransferases [BR:
rtem01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
120937470 (GGPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
ELF3_helical
Motif
Other DBs
NCBI-GeneID:
120937470
NCBI-ProteinID:
XP_040206661
LinkDB
All DBs
Position
4:complement(331896319..332069812)
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AA seq
299 aa
AA seq
DB search
MTTSTETSERILLEPYKYLLQLPGKQIRTKLSQAFNHWLNVPEDKTQVIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLNHPDAVNVFTQQLL
ELHRGQGLDIYWRDTYTCPTETEYKSMVLQKTGGLFGLAVGLMQLFSYSKKDLKPLLNTL
GLFFQIRDDYANLNSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
VDIKKYCVHYLDKVGSFEYTRQTLRELEKEAYGQIELLGGNPELVSIIEQLSQTYKNPS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaccacctccacggagacatcagagagaatattactggaaccgtataagtatttactt
cagcttccaggtaagcaaattagaacaaagttgtctcaagcctttaaccattggcttaac
gtgccagaagataaaacacaggtaataattgaagtgaccgaaatgcttcacaatgccagt
ctacttattgatgacattgaagacaactccaaacttcgcagaggttttcctgttgcccat
agcatttatggggttccatctgttataaattctgcaaattatgtatattttttaggattg
gagaaagttttaacacttaatcatccagatgctgtcaatgttttcacccagcagttactt
gaactgcaccgtggacaaggattagacatatactggagagatacatatacttgtcctact
gaaactgaatataagagcatggttttgcagaaaactggaggtttgtttggactagctgta
ggcctaatgcagctgttttcatattctaaaaaagatctgaaacctctgctaaacactctt
ggacttttctttcaaatcagagatgattatgccaatttaaattctaaagagtatagtgag
aacaaaagcttctgtgaagacttgacagaaggaaagttttcatttccaacaatacatgca
atttggtcaaggcctgaaagtactcaggtacaaaatatactgcggcagaggacagagaat
gtagacatcaagaaatactgtgtgcattatctagacaaggttggctcctttgaatacaca
agacaaactttaagagagttagaaaaggaggcatacggacaaattgaattactaggagga
aatcctgagttggtttcaataattgaacagctgagccaaacgtacaaaaacccatcatag
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