Rana temporaria (common frog): 120940629
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Entry
120940629 CDS
T07929
Symbol
TNFRSF11A
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A isoform X1
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120940629 (TNFRSF11A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
rtem04050
]
120940629 (TNFRSF11A)
04090 CD molecules [BR:
rtem04090
]
120940629 (TNFRSF11A)
Cytokine receptors [BR:
rtem04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
120940629 (TNFRSF11A)
CD molecules [BR:
rtem04090
]
Proteins
120940629 (TNFRSF11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
RANK_CRD_2
Comm
DUF6377
Amastin
Claudin_2
DUF7630
SDF
TMEM154
DUF7338
Frizzled
Motif
Other DBs
NCBI-GeneID:
120940629
NCBI-ProteinID:
XP_040209530
LinkDB
All DBs
Position
5:235464001..235564840
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AA seq
572 aa
AA seq
DB search
MEVFMIRLWIIGALYITLWCFGAETTPYCDPEKQYAHSGKCCSKCKPGTYMSKRCTDIAD
TVCRPCGPNEYMSAWNDDLKCTLHMVCDAGKALQVLHNGNSTYPRQCVCIDGHYFYTNEE
ICMDNTNCPPGFGVQIPVQRNKNTVCIQCQEGYFSNTSSTTEQCHPWTNCSEFGLQEIEP
GTNISDAVCDHLKNTRKVTKMIIIISVLIVALAVLLFICILCCMKKYSTLKAPQDWMRET
CDNLSGSKKKSQYREAKTTKPIYTIITNTNIVENIHSGNVKETETLRGRLIPMEDEYMDQ
RRSPEPENGSIVAGTASLSDLESGSLGTSHAYSDTSSDRLLFPNEEVTFPPCPEHHSSQS
AKEAPRNRTEEYCIPDPVDKNYGQHSSRHEFHIYPQPSYHMPEKNTDKEPCSCFTNAQYT
RSSSKNSTDNMSSPETPPTPSGNVTGNNNTTVISSAPVMNIKTDMVVVYYSGVSQDAHAP
CESEENIKQPMQEERQDHCDSFVANTPLYNYNDIPCCSMPDTDCPEAEVNLRDSNCPVTS
SQDLSDAMYYQNTDFIPVQEEGKPEFYHIEVI
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcttcatgatcagattatggattattggcgcactctatatcactttatggtgt
tttggagcagaaaccactccttactgtgacccagaaaaacagtatgcgcattcaggaaaa
tgctgcagtaaatgcaaaccaggaacatatatgagcaaaagatgcactgacattgcagat
actgtttgcagaccatgtggccctaatgagtacatgagtgcctggaatgatgatttgaaa
tgtacccttcatatggtgtgtgatgcaggaaaagccctgcaggtgcttcacaatgggaac
agcacttatcctcgacaatgtgtgtgcattgacggacactatttttataccaatgaagaa
atatgcatggacaatacaaactgtcctcctggctttggcgtacagatcccagttcagcgg
aataaaaatactgtatgcatacaatgccaagagggatatttttccaacacttcctcaaca
acagagcaatgccatccatggacaaactgttccgagttcggacttcaagagattgaacct
ggcaccaatatatcggatgctgtttgtgatcatctcaaaaatactcgtaaggtgacaaag
atgattatcattatctctgttctcattgtagcactggctgtgcttttattcatctgtatt
ttgtgttgtatgaagaaatacagtaccctgaaagcacctcaagattggatgcgagaaact
tgtgacaatttaagtggttcaaagaaaaaatcacaatacagggaagcaaaaacgactaaa
cctatttacactataataacaaatacaaatatagtggagaatatccattctggaaacgta
aaagaaacagagactctaagaggtagactgatcccaatggaagatgaatacatggaccag
agaagatcacctgagcctgagaatggaagcatagttgctggcacagcgtccttatcagac
ctggagagtggctctttgggaacttcccatgcttactcagacactagctcagacaggttg
ctgtttcccaatgaagaggtcacatttccaccatgcccagaacatcacagtagtcagtct
gccaaagaggctcctaggaatcggacggaggaatactgcatccctgatccagtggacaaa
aactatggtcaacatagctctcgtcatgagttccatatttacccacaaccatcttaccat
atgccagagaaaaatactgacaaggagccatgttcctgcttcaccaatgctcagtacaca
agaagcagcagtaaaaatagcactgacaacatgtcgtctccagagacgccaccaacgcca
tcaggaaatgtgactggaaataacaacacaacagtcatttcaagtgctccagtaatgaac
attaaaacagatatggtagtagtctattacagtggagtctcccaggacgctcacgcacct
tgcgaaagtgaagaaaacattaagcagccaatgcaagaagaaaggcaggaccattgtgac
agctttgtggcaaacacaccactgtacaactacaatgacattccctgctgctcaatgcca
gatacagactgtccagaagctgaggttaatctgagagactccaactgtccggtcacgtcc
agtcaggaccttagtgatgctatgtactatcaaaatacagattttatacctgtacaagag
gaaggaaagccggaattttaccatatagaagttatataa
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