Rana temporaria (common frog): 120943229
Help
Entry
120943229 CDS
T07929
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120943229 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120943229 (SMCR8)
Membrane trafficking [BR:
rtem04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
120943229 (SMCR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
120943229
NCBI-ProteinID:
XP_040212351
LinkDB
All DBs
Position
6:20196495..20213366
Genome browser
AA seq
929 aa
AA seq
DB search
MIGSPDLVAFTREEEEYDEPAMRVSPGLPEEYSVPLFPYSEAESSPWSRLSGAKFGRDFV
LISEFSEQVGPQPLLTIPDDPRVRGTFDLNYFSLRIMSVDYQASFVGHPPGSSYPKLNFV
EDSKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISTDEDKIMHQFLELSGEFSK
ASDCLKTGNRKAFANELEKKLKDLDYTRSVLLEEMEEQQKTDDKGFYTTQAIEKANELGN
VEKSMIEHQDLLKQIQSYPYRHLKGEDYQLYVPESVQDEATNGTPEPAVASDHEENGDAD
VFTSRPSYTPKFIKAKSSKCFDKKLKTLEELVDSYFFTQTIDLLTSLEKRYRGDVSYLLM
GHLDRALLEQQTIVNFLFEDVSTWDLKLVDRQYSDNLLAAHTVPSPGLEHETIKPSTSLE
SYKSSVESVPIKIEQEFNSDNDREVSELADCDNPGHMEFLDVDTKGSISSGESIEVLQTE
KSTVLIHSESQPCLGPHTSPQPPRRKAGSRRTISEDSIEVLSTCPSETVIPEDFRATYQM
AIDEEDPIVEDLDREQQVVQGSPEVDAFKNDEAENDLAMEPPCCIRTDNSSPEEQSGELV
PEQCDERAVVSVPPQPSKGMGQNFGQVKFSIEHVENAYSEPPTAPESSYLLSSKDAEKHL
LDEYSDSTSFRSSASTCSDRTPSPPPVVTVTDRQKRKAGQNALMFIRQYPFSHPAIYSLL
SGRTLVVLGEEEAFVKRLVTALSLFVPNYGQVAKPIKPWVTSPLHIMDFQKWKLIGLQRG
VSSSGCNTLHSLNRYSRYASILDADNKTLRCPVYRGTFLQRLADHRTQIRKGSTYYMHVQ
SMLTQLGAKAFLFTFCHHVHLPVRDKESEEAIAQRRANFLHQLLGLSQEDARIVEYLSEL
LKMHYLRESGTQLLPVLRFDYIPSFLYKI
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgattggttccccagacctggtggcgtttacgagggaggaggaggagtacgacgagcca
gcgatgagggtctccccgggtttgccggaggagtactcggtgcccctcttcccgtactcg
gaggcagagagcagcccctggtcccgcctctccggagccaaattcggccgcgacttcgtc
ctcatctctgaattctccgagcaagtggggccgcagccgttgctcaccatccccgacgac
ccgcgagtgcgcggcaccttcgacctcaactacttctccctgaggatcatgtccgttgac
taccaggcctccttcgttgggcacccgcccggctcttcctaccccaaactcaacttcgtc
gaagactccaaggtcgtcctgggcgactccaaagagggagccttcgcctacgtccaccac
ctgaccctgtacgacctggaggcccgcggcttcgtccgccccttctgcatggcgtacatt
tccaccgacgaggacaagatcatgcatcagttcctggagctctctggagaattctccaag
gcgtccgactgcctgaagaccggcaaccgcaaggccttcgccaacgagctggagaaaaaa
ctcaaggacctggattacacccgctcggtgctgttggaggagatggaggagcagcagaag
acggacgacaagggcttctacacgacgcaggccatcgagaaggccaacgagctgggaaac
gtagaaaagtccatgatcgagcaccaggatttgctcaaacagatccagtcctatccctat
agacatttaaaaggggaggactaccagctgtatgtgccggaaagtgttcaggatgaagct
acaaatgggacacctgaaccagcagtggcatctgaccacgaggagaatggagatgcggac
gtctttacttcaagaccttcctacacccccaagttcatcaaggccaaatcttccaaatgt
ttcgataagaaattgaaaacgttggaggagcttgtggacagttatttctttacgcaaacc
atagacttgctgaccagcctcgagaagagatacagaggtgacgtcagctacttgttgatg
ggccaccttgaccgagctctgttggagcagcagaccatagtcaacttcttgtttgaagac
gtgtccacctgggatttgaagctagtcgacaggcaatactcggacaacttgttagctgct
cacactgtgccaagtcccggcctagaacatgaaaccattaagccttcaacaagtttagaa
tcttacaagtccagcgttgagtctgtccctattaaaattgagcaggagtttaacagtgac
aacgatcgggaagtatccgagttagccgattgtgataacccaggtcacatggaatttctt
gacgtggatactaaagggagcataagcagcggtgaaagtattgaggtcttacagacggaa
aaatccaccgtgctgatccactctgagagccagccgtgtcttggaccgcatactagccct
cagccgccaagaagaaaagccgggagcaggcggaccattagcgaagacagtatagaagtt
cttagcacgtgtccttccgaaactgtgattcctgaggattttcgggcaacgtaccaaatg
gctattgatgaagaagatcccattgtggaagatttggatagggagcaacaggttgtgcaa
ggctctccagaagtagatgccttcaagaatgatgaagccgaaaatgatttggccatggag
cctccatgttgtatcaggacggacaactcaagtccagaagaacaaagcggagagcttgtt
cctgaacaatgtgatgaaagagctgttgttagcgtcccaccacagccatctaagggcatg
ggccagaactttggtcaagtgaagttctccattgaacatgtagaaaatgcttatagtgaa
ccacctacagctcctgagtctagttacttgttgagcagcaaggatgctgagaagcacctg
cttgatgaatactctgactcgaccagttttagaagtagcgcatcaacatgctccgaccgg
acaccatcccctcctcccgtcgtcacggtcacagaccggcagaaacggaaagctggccaa
aatgcactaatgttcatcaggcagtaccccttttcccatcctgccatctattctcttttg
agtgggagaactcttgtggtcctgggtgaggaggaggcctttgtgaagaggctcgtcact
gctttgtctttgtttgtcccgaactatggacaagttgccaaaccgattaagccatgggtg
acttcgcctctacacatcatggatttccagaagtggaaactgattgggcttcagaggggg
gtctcctcgtccggctgcaacaccctccattctctgaaccgctacagccgctatgccagc
atcctggacgccgacaacaaaactctccgttgccccgtgtaccggggaaccttcttgcag
aggctggctgaccaccgcactcagatccgtaaaggcagcacctactacatgcacgtgcag
agtatgctgacccagctcggcgccaaagccttcctttttactttctgccatcacgtccac
ctgcccgtccgggataaggagagcgaggaggctatcgcacagcgccgggccaacttcctc
caccagctgcttggcctgtctcaggaggacgctagaattgtagaatacctctcggagctc
ctgaaaatgcattacctaagggaatcggggacgcagctccttcccgtgctcaggttcgac
tatatcccaagctttttatacaaaatctga
DBGET
integrated database retrieval system
