Rana temporaria (common frog): 120943397
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Entry
120943397 CDS
T07929
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00514
Other types of O-glycan biosynthesis
rtem04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120943397 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120943397 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtem01003
]
120943397 (LFNG)
Enzymes [BR:
rtem01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
120943397 (LFNG)
Glycosyltransferases [BR:
rtem01003
]
Glycan extension
O-Glycan
120943397 (LFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
DUF2785
Motif
Other DBs
NCBI-GeneID:
120943397
NCBI-ProteinID:
XP_040212611
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All DBs
Position
6:complement(37723634..37738862)
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AA seq
368 aa
AA seq
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MLKNFGRKLLLSMVGATLTCLLVLVVDQQNRQLVQMAQTTDLSELIGAANAQGEEPPSKD
AQTFSAYFNQLTRDRKDVEQVGAPSAGAPGASKPTIEEITAKDVFIAVKTTKKFHRSRMD
LLMDTWISRNKEQTFIFTDGEDEELQKKTDNVISTNCSAAHSRQALSCKMAVEYDQFIES
NMKWFCHVDDDNYVNVKTLIKLLSRYSHTNDIYIGKPSLDRPIQATERISESKMRPVNFW
FATGGAGFCISRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIESVLGVKLIRSNLF
HSHLENLHQVPQIEIPNQVTLSYGMFENKRNAILMKGVFSVEEDPSRFRSVHCLLYPDTP
WCPKTYAY
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagaacttcggaaggaagctgctgctgtccatggtgggcgccaccctcacctgc
ctgctggtcctggtagtggatcagcagaacagacagctggtacagatggcacagaccacc
gacctctccgagctgatcggggcagccaatgcccagggcgaggagccgccctccaaggat
gcccagaccttctccgcttatttcaaccagctcacccgggacaggaaggacgtggagcaa
gtgggggccccttctgctggggccccgggggccagcaagcccaccatagaagaaatcacc
gctaaagatgtcttcattgccgtgaagaccaccaagaagttccaccggtccaggatggac
ctgcttatggacacctggatctccaggaacaaggagcagactttcatcttcacggatggg
gaggacgaagagctgcagaaaaagacagataatgtcatcagcacaaactgctccgctgct
cacagccgccaagccttgtcctgtaaaatggccgttgagtatgaccagttcatagagtcc
aacatgaagtggttctgccatgtggacgatgacaattacgtcaatgtgaagactctaatt
aaactgttgtcgcgttattctcatacaaatgatatctatattgggaagccaagtttagat
cggcccatccaagcaaccgagaggatcagtgaaagcaaaatgcgtcctgttaacttctgg
tttgccactggaggagccgggttctgcattagccgaggattggccctgaaaatgagccca
tgggcaagtgggggacacttcatgaacacagctgagaaaatccgacttcccgatgactgc
accatcggttatatcattgagtctgttcttggagtgaagctaatacgaagcaacctcttc
cattctcatctggaaaacctgcaccaagttcctcaaattgaaatcccaaatcaggtgaca
ttgagttacggaatgtttgaaaacaagagaaatgcaatcctcatgaaaggagtcttttca
gttgaggaagatccatcaaggtttcgctctgtccattgtcttctatatccagatactccc
tggtgccccaaaacctatgcctattag
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