Rana temporaria (common frog): 120945025
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Entry
120945025 CDS
T07929
Symbol
PLXND1
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
120945025 (PLXND1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
TIG_2
PSI_PlexinA-B
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
120945025
NCBI-ProteinID:
XP_040214790
LinkDB
All DBs
Position
7:complement(9738037..9900812)
Genome browser
AA seq
1879 aa
AA seq
DB search
MALWTLLLFLHLVGSAADLLLLSTFRSAQPTNNFAVDSAGRRMYLAAVNRLYQLRSGDLR
AEVAEVTGPVLDSPLCHAPQVPDSICDVPRALTPNYNKILELDEEQGLLLTCGSVYQGLC
QFRLPSNISLLAVPFPPSNVVPSMLNVAANHANASTVGLLLKGPDTRLLVGASYTGYGSQ
FFFWNQSVVDHRFENSPEISIRALNTATPTKLFTFDISPSDDNIFKVKQGNKRNIRLVFI
RAFQQDGFGYLAMNLEPAPAGKESRPSSAIARLCLTPDPRGDTRKLTESYIQLGLRCEGP
EGALYGRLVSVFAEPGRMFGVFEGQKDMAVCAYRLRDVGKEIREARSSCFEKKDDGEVLV
QVLDSVVQGGGPKCAGKSTNSERSIKLQEEQLDCGAAHLQHPLTINRPLSATPLFKAPGL
TSVAVANVSGYTVAFLGTAGGQLLKITLDDDMKIVSRQSLLIARGEPIHHIMRFHPVTPT
HLYVMTTHQMAKVKVADCNKFQTCAECLEAADAYCGWCTMEARCSMQQECSNSEEGAFWT
NPRGGVPQCPAVGIIPDKIDFASETQTILLQITGNLPSLQLMNSSCDYGNGIHLPARIVD
DAEEQWAHCAFLPRKNFPEFPANQDHVNVTLGVTVGGIHIAESNFIIYDCERTVDIHPKT
SCTSCVTSVWPCKWCVSQHKCSSNSSRCDSTVESTEDCPQITTTYLPPTPTGIATEVTLS
LANVNLTKDLGLECDFGPQQTFPAKWVNSSSVSCSNVLLQTSESSRKFQVNLQLINHPGK
FLDNPNAVTVEVYNCASETNDCSLCLGRTDLGHLCAWSDSSASCRLKSESLPVQGTCPAP
EIWKIEPVNGPLLGGTLLTILGRNLGSRHSDIADKVRIGDVPCTPIADRYLVSQEIVCVT
GASARELSDWVILDINGGGHSKEKYSFLVPKIYSMFPSLGPKAGGTKITISGDQLDIGGD
VRVLFDDTLECRDLVRTENLIRCTVPSMGLLPNTNVTVCVQFERSACLDQNFTFQYKENP
VIKTMEPRSSHMSGGRIITLTGERFGLIQDVKIKIKNHNGGQLNCTVISDTVITCPSPTA
PNTTMEKINMSVSFYVNGVYDLSNEELGEDPSEKRSLKSKFSLEYQPNPVFYTSQREKLI
KHHVGEPLTLVIHKEHDDLGLREDEYQVKVGHTPCDLIVFNDKVIHCTINGSLDSSERYQ
PVTVQVGKYNQTITMLHLAGIDTSIIVSVIICSILLLLSVVALFVFCTKSRRAERYWQKT
LVQMEEMESQIRDEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLY
EDRYTVPMQNFNSQLKISVPETHPLLSEDWRVPESCRSNMEEGIVTLSTLLSNRHFLVTF
IHAMEMQKDFAVRDRCNLASLLTIALHGKLEYYTSIMKDLLVDLIDSSAPKNPKLMLRRT
ESVVEKMLTNWMSICMYSCLRETVGEPFFLLLCAIKQQINKGSIDAITGKARYTLNEEWL
LRENIEAKPMNLNVSFQVCGMDSLSVRALDTDTISQCKEKILEAFCKNLPFSQWPQVEDV
DLEWFASLSQPLILRDLDDTSLMEDGRKKLNTLSHYKVCDGASLAMSLKDQRDNTLGRAK
DLDTDKYFHLVLPTDDVLEHKRSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFRAIL
TIREDRPPLAIKYFFDFLEEQAEKRGISDPDTLHIWKTNSLPLRFWVNILKNPEFVFDME
KSDHMDACLSVIAQAFIDACSISDMQLGKDSPTNKLLYAKEIPEYRKIVQKYYQQIKEMS
PLSEQEMNAHLAEESRKYQNKFNTNVAIAGIYKYAKKYRSQIVSALEANPVTRRGQLQHK
FEQMIILMEDDIYTCSSEA
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtggactctgctgctcttcttgcaccttgtgggctccgcggccgacctgctg
ctcctcagcacgttccgctccgcgcagcccaccaacaacttcgcggtggactcggcgggg
cggcggatgtacctggcggcggtgaaccggctgtaccagctgcggagcggggatctgcgg
gcggaggtggcggaggtgaccggtccggtgctggactccccgctctgccacgctccgcag
gtcccggactctatctgtgacgttccgcgggctctaacccccaactacaacaagatcctg
gagctggacgaggagcaggggctcctactgacctgcggatcagtctaccaggggctgtgc
caattcaggctcccgagcaacatctccctgctggcggtgccgttccccccgagcaacgtg
gtgcccagcatgctgaacgtcgccgccaaccatgccaacgcctccaccgtggggctcctg
ctgaagggccccgacaccaggctcctggtcggggccagctacaccgggtacggcagccag
ttcttcttctggaaccagagcgtggtggaccaccggttcgagaacagccccgagatctcc
atccgggccctgaacaccgccacccccaccaagctcttcaccttcgacatcagcccctcc
gacgacaacatcttcaaggtgaagcagggcaacaagcggaacatccgactggtcttcatc
cgggctttccaacaggacggcttcggctacctcgccatgaacctagagcccgcccccgcg
gggaaggagagccggcccagcagcgccatcgcacgcctctgcctgacgccggatccgcgg
ggggacacccgcaagctcaccgagtcctacatccagctgggcctgcgctgcgaggggccc
gagggggccctgtacgggcgtttggtgtctgttttcgcggagcctggaaggatgtttggg
gtgttcgagggtcagaaggatatggcggtgtgcgcttaccggctccgcgacgtggggaag
gagatccgcgaggcgcggagcagctgtttcgaaaagaaggatgatggggaggtgctggtg
caggtgctggatagtgtggtgcaaggcggagggcccaagtgtgcagggaagagcaccaat
agtgagaggagcatcaagctgcaggaagaacagttggattgtggggccgcgcatctccag
cacccgctcaccatcaatcggcctctgtctgccaccccgctcttcaaggctcccggactg
acctcggtggcggtggccaacgttagcggctacacggtggccttcctcggcacggcaggt
ggacagcttctcaagatcactctggacgatgacatgaaaatcgtgagccgccagtccctt
ctgatagcgcgaggggagccgatccaccacatcatgcgattccaccccgtgactcccacc
cacctctacgtcatgaccacccatcagatggcgaaggtcaaagtggccgattgcaacaag
ttccaaacctgcgcagagtgtctggaggcagccgatgcctattgtggttggtgcaccatg
gaagccaggtgctccatgcaacaagaatgctctaattctgaagagggggcgttctggacc
aatccgaggggaggggtgccgcagtgtccggcggtcggaattatcccggataaaatcgac
ttcgcctccgagactcagacaatccttctccaaatcactggaaacctccccagtcttcag
ttgatgaactcttcctgtgactatgggaacggcattcacttgccggccaggattgtggat
gacgctgaagaacagtgggctcactgcgccttccttccacggaaaaacttcccggaattc
cccgccaaccaagatcacgtaaacgtcactctgggcgtcaccgttggagggatccatatt
gccgaaagcaatttcattatatatgactgtgagaggaccgtcgacatccatccgaaaaca
tcgtgcaccagctgtgtgacatcggtgtggccctgtaaatggtgtgtgagccaacacaag
tgttcctccaatagttcccggtgtgactctactgttgagagtacagaagactgcccccag
ataacgaccacctacctgcctcccacaccgaccggcatcgccacagaggtcaccctgtcc
ttggccaacgtcaacctgacaaaggatctgggcctggaatgtgactttggaccacaacag
accttcccggccaagtgggtgaattcctcctccgtctcatgcagcaatgtcctgctccaa
acttcagaaagcagccggaaatttcaagtgaacctgcagctcatcaaccaccccggaaag
ttccttgacaatcccaacgcggtaaccgtggaagtttacaactgtgcatctgagaccaac
gactgttccctgtgcctcggacgcacggatttagggcacctgtgcgcttggagtgacagc
agcgcctcctgcagactgaaaagtgaatcacttcctgttcagggcacttgccctgcccct
gagatctggaagatagagccagtgaacggacctttgcttggcggcactctgctgacaatc
ctcggacgcaatctgggcagccgccacagcgacatcgcggacaaggtgaggatcggagac
gtcccctgtacgcccatcgcagacagatacctggtgtcacaagagatcgtctgtgtgacg
ggggcgtccgctcgtgagctgagcgattgggtgatcctggacatcaatggagggggacac
tcaaaggagaaatattcctttctggtgccaaagatatattccatgttcccaagtcttggc
ccaaaagctggaggaaccaaaatcaccatttccggggaccagcttgacatcggtggagac
gtgcgcgtcctgtttgatgacaccctggagtgccgagaccttgtacgcacagagaacctc
atccgttgcaccgttccatcaatgggcctccttcccaacaccaatgtcactgtttgtgtc
cagttcgaaagaagcgcgtgtctagatcagaatttcactttccaatacaaggagaaccca
gtcatcaaaaccatggagcccagaagcagccacatgagtggaggtcgaatcatcactctc
actggagaacggttcggcttgattcaagatgtgaagataaagattaaaaaccataatgga
ggacaattgaactgcacggttatcagtgacactgtgatcacctgcccttcccccacggcg
cccaacaccaccatggagaaaataaacatgagcgtgtccttctacgtcaacggtgtctat
gatctgtccaacgaggaacttggggaggacccatcagagaagcgatccttgaaaagcaag
ttcagcctggaatatcaacccaaccctgtgttctacacctcccagagggagaagttgatc
aaacaccatgttggagaacctttgactttggtgatacataaagaacacgatgacctgggc
ctgagagaggacgagtatcaagtcaaggttggccatactccatgtgatctgatagttttc
aatgacaaagtcatccactgcaccatcaacgggtcactggattcctcagagcgctaccaa
cctgttactgtacaagtcggtaaatacaaccagaccatcaccatgcttcacctggctggc
atagatacgtcaatcattgtgtccgtcattatctgtagcatattgttgcttctgtctgtg
gtggcgctgtttgtcttttgcaccaaaagccggcgagctgaacgctattggcagaaaaca
ctcgtacaaatggaagagatggagtcccagatccgggatgagatcagaaaaggattcgcc
gagctgcagacagatatgacggatctcaccaaagaactgaaccgcagccagggaatacca
ttcctggagtacaagcattttgtgacccgcaccttcttcccaaagtgttcttccttgtat
gaggatcgctacaccgtgcccatgcagaacttcaactcccaactgaagatttcagtgcct
gagacccacccgctgctgtccgaagactggagggtcccagaaagctgtcgatcaaatatg
gaggaggggatcgtcacgctgtcaactctcttgagcaatcgccatttcttggtgaccttc
atccatgcgatggagatgcagaaggactttgctgtgagggacaggtgtaacttggcctct
ctgctcactatcgccctccatggcaagttggagtactacacgagcatcatgaaagatctc
ctggtggacctcatcgactcgtcagcccccaagaaccccaagctgatgcttcgccggacc
gagtcggtggtggagaaaatgctgaccaactggatgtctatctgcatgtacagctgcctc
cgggaaaccgtgggagagccattcttcttgctgctgtgcgccattaaacaacaaatcaac
aagggctccattgatgccatcaccgggaaggcgcggtacaccctgaacgaggagtggctg
ctcagagagaacattgaggccaagccaatgaacctcaacgtgtccttccaggtctgcggc
atggactcgctgagcgtgcgcgcgttggacacggacaccatcagccagtgcaaagagaag
atcctggaggctttctgcaagaacctgcccttttcccagtggcctcaggtggaggatgtg
gatttggaatggtttgcctccctttcccaaccccttatcctgcgagatctggacgatacg
tcactcatggaggacggaaggaagaagctgaacacactctcacattataaggtctgtgat
ggagcttcgttggccatgagcttgaaggatcagagagataacacattggggcgagcaaaa
gacctggacactgacaagtacttccatctggttctccccacagatgacgtactggaacac
aaaaggtcccaccggcagagtcaccgcaagaaggttctaccagaaatctacttaacccga
ctcctttctacaaagggaactctacagaaattcctggacgatctgttccgggccatcctc
accatccgggaggaccggccgcctctcgccatcaaatacttcttcgacttcctggaggag
caggcggaaaaacgcggcatttctgacccggacaccctgcacatctggaagaccaatagc
ctccctctgcgtttctgggtgaatatcctgaagaaccccgagtttgtctttgatatggag
aaatcggaccacatggacgcctgcctgtctgtcatcgctcaggccttcatagacgcctgc
tccatctccgacatgcagcttggaaaggactcccccaccaacaagctgctgtacgccaag
gagattccggagtatcggaaaatcgtgcagaaatattaccagcagatcaaggagatgagc
ccgctgagcgagcaggaaatgaacgcccacctcgcggaggagtcgcggaaataccaaaac
aaattcaacaccaacgtcgctattgcagggatttacaaatacgccaaaaaatatcgctca
cagattgtcagcgctctagaagccaaccctgtcaccagacgtggccaattacagcacaag
ttcgagcaaatgataatcctgatggaggacgatatctacacgtgtagcagcgaggcctag
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integrated database retrieval system
