Rana temporaria (common frog): 120945298
Help
Entry
120945298 CDS
T07929
Symbol
NUP210
Name
(RefSeq) nuclear pore membrane glycoprotein 210
KO
K14314
nuclear pore complex protein Nup210
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120945298 (NUP210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120945298 (NUP210)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120945298 (NUP210)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_15th
Ig_NUP210_1st
Ig_NUP210_4th
Ig_NUP210_9th
Ig_NUP210_7th
Ig_NUP210_6th
Big_2
NUP210_Ig
Motif
Other DBs
NCBI-GeneID:
120945298
NCBI-ProteinID:
XP_040215305
LinkDB
All DBs
Position
7:complement(52946556..53139683)
Genome browser
AA seq
1881 aa
AA seq
DB search
MGLLPGALLLVIALTGLHLTCCSKLNIPKLLLPYTRGTRINYTLEVTEGCYKWSSTRPEV
ASIVALSTHDQQCSQRAVVQARASHPTRLTSIIFAEDINTGQVLRCDAIVDIINEIQIVS
TTRELYLEDSPLELTIQALDSEGNTFSTLAGMVFDWAVTKDKEMDGYTDSHNSLRILKFL
ESTYVPPIYITEMEKVAKQGDTILVSGMKTGSSKLRAKMLETVYEKVHPAEVRLLILENI
LLNPAYDIYLLVGSSIKYKVQKIKQGKIADLLMPSEQYALQLQNHVPAPMGTKFDPVAKL
DQRTSKVTALQEGQTNIVLLHKNIRMQGASRLPNGTIFVVEAGYLGFTVHPGDQWVLETE
RYYEITIDIYDKSSNKVYLSDNIRIEAKIPKEYFEILESSLNGSYHHVKALKSGQTIIDA
ALTCMVDEDGGVHVLPNPVRNQQEVEIYTPITLSPKILTFPWQPKPGAYQYIIQVHGGSG
NFTWSSSNNAVATVTVKGLMTTGDDIGVSVIRASDVQNSLHFGEMKVFVIEPTGMEFTPC
PVEARIGNRLELPLRIFGILNGDNEVVSLSDCSHFDLSVEMETPGIFKILPGRLEPNVDY
CSGITVQGVTAGYTTVFVSYTHGHVHLKAKIIIAAYLPLKTVDPTSLALVTLGSSKDILF
EGGPKPWVLEPLKFFRNLSTADAEGTGLFHLDPPSSRNHFQHWTRAVCRDLGELVISLSV
GNRPTETNLFPAVENVEVKLACSPLSRFTVTPVYKHSHKDLICPLMQQDKQVIPVSNYQN
QLVQLSAYDSHGTKFDNFSSLAIDWESSKIQLASFDSDKPMSYFEKEDSNGQRKLHGLNT
VHVRQVSGTAVITTTTNNYRESHLRAAKVKTPYRTLTPVSASLELLLVEDVKVNPGSISI
YNHPEVTAEFTISEGSGYFYINSSISNIVKTVFLETKGILTVYPLRPGTLSIMVYDLCLA
FPAPAAVHVHVSDILQVEVRVVDKVEIGKSIKAYVRVLDSSQMPFLAKYFAYMDLDLGSS
SHIVSIKALSEKVDEFTAVFEVHGLALGQTSLVASVADKTGNRIDSSARSLEVFPPFRLL
PRRITLLIGATMQITSEGGPHPQSNIIFSIANEKVASVSTNGLVRGETIGNISVTGAIQA
VDTESGKVAIVSEDKVEVEVIQLKAVRIHAPITRMKGGTQMPVYVMGISSNQTPFSFGNA
VPGLVFYWSVVKRDIIEVKSRHDEVSVELPGQYNFAMNVYAKMRGKTGLKVTVRVTDPLA
KQFYGQAHEFSDEIQIQVFERLHLISPNVEAEQILLAPNSKLRLQTNRDRAATVGYRVLN
GVKKPPVVQVDDNGLLTSGSFTGISTMEVNSQEPFGINQTIIVSVKVSPVSYMRIVTSPV
LQTETSHLLSTIPLGITLHFSAHFHDNTGEVFHAQNSVLKFALNRDDFVQIGKGPSNDSL
VMRTVNVGYTILSVWDAENPGISDYIPLPVQHSIYPSLNEDVVVGDVICFTSTVASKKGL
AGTWSSSSISTLQIDPRTGAALARDSGFVTVYYEIPGFLKSYREMLIRSPLRTHVVNANG
EKISLQAGNIHKLLVEIGENNNNLKGECSAAQIEAIQDLHPENMINCHLRFKDQNLDISA
SEVFSANTDFDFDSGHYICSLGRQKLSEGQLKQISIGDTSLIVTASILGINVYQEQTSAH
VPVYPGFYTNQKELLLSSHYPTTNVKIFGVAELLKNLEVKPELSIITVYQKEKYTGVPSF
VTYEVGLSDMQVLNQGSLSTSLTISSYMSDQTINIPIRLMSATGPLNVPYAMGQGFFYHF
LNSYQIIFFTLFTLLAGAAIAILVFSPKERIDHPAFISASPTRSLGSSLVSSPPPALSYH
NQGSPMRNNSRSLWSPEYCSN
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atggggctcttacctggggctcttctgcttgtcattgccctgacagggctgcacctcaca
tgctgctccaagctcaatatccccaaactgctcctaccatatacaagaggaacccggatc
aactacaccctggaggtcactgagggctgctacaaatggtcatcaactagaccagaagtt
gccagcatagttgcgttaagcacacatgaccagcagtgctcacaacgtgctgtggtacaa
gccagagcaagtcatcctacgcggctaaccagtatcatttttgctgaagatataaacacg
ggacaggttttacggtgtgatgcgattgtggacataattaatgagattcaaattgtatcg
actacaagagaactttatctggaggactctcccctggagctaacaatacaagctttagac
tctgaaggtaacacattcagcactttagctgggatggtctttgactgggcagtaacgaag
gataaagaaatggatggttacactgattcacataatagcttgaggattttgaaatttttg
gaatccacctatgtaccaccgatctatatcacagaaatggagaaagttgcaaagcaaggt
gacactattttagtatctggaatgaaaactggaagctcaaaactccgagcaaaaatgctt
gaaactgtgtatgagaaagtgcatccagcggaggttcgacttcttatcttggagaatatc
ctccttaatcctgcgtatgatatctacctgcttgtggggtcatctataaagtacaaagtg
caaaaaataaaacagggaaagatcgcagatttattgatgccgtcagaacaatacgcattg
cagcttcagaaccatgtgcctgctccaatgggtactaaatttgatccagtggctaagctg
gaccagagaacatctaaagtgacagcattgcaggagggtcaaaccaacattgtgcttctc
cataagaatatccgcatgcaaggtgcttctcgattaccgaatggaacgatatttgtggtg
gaagctggatatttaggatttactgtacaccctggagatcaatgggtgctcgaaactgaa
agatactatgaaataactattgatatatatgacaaatccagcaacaaggtgtatttatct
gataatatacgtattgaagcaaagataccaaaggaatactttgagattctggaaagctcg
ctaaatgggtcgtaccatcatgtgaaggccttgaaaagtggtcagacaatcattgatgca
gctttgacatgtatggtagatgaagatgggggtgttcacgtgctgccaaatcctgtgagg
aaccagcaagaggtggaaatctatactccgattacactttcacccaaaattcttactttt
ccctggcagcctaagccaggagcttatcagtacataatacaggtacatggtggaagtgga
aattttacctggtcgtcctcaaataatgctgtggctactgtgactgtcaaagggttaatg
acaactggagatgacattggtgttagtgttatacgggctagtgatgtgcaaaattcttta
cattttggagagatgaaggtgtttgtcattgaacccactggcatggaattcacgccttgt
ccggttgaagctcgtataggaaacaggctggagctgcctttaaggatatttggcatcctc
aatggtgataatgaggttgtgtcattgagtgactgctcgcattttgacttgtctgtggaa
atggagactcctggaatattcaagatcctgccaggcagacttgagccaaatgttgattat
tgtagtggtattacagtacaaggagtgactgcggggtacacaactgtgtttgtcagctac
actcatggtcatgtacacttaaaagccaaaattataattgctgcttatctacctctaaag
acagttgatcctacatctttagctctagtgaccttgggctcctcaaaagacattttattt
gaaggtggtcctaaaccatgggtacttgaacccctgaaattttttaggaacctatctact
gcagacgcagaaggcactggcctgtttcatcttgatcccccttcgtctcgcaatcatttt
caacattggactagagcagtttgcagggacctcggtgagctggtaatttccttgtctgta
gggaatcgccccacagaaaccaacctatttccagcagtcgagaatgttgaagtgaagctg
gcctgttccccgctctcgcgtttcactgttactcctgtgtataaacattcccataaggat
cttatctgtcctctgatgcagcaagacaaacaagtgattccagtttccaattaccaaaac
cagttggttcaattatcagcttatgacagtcatggaactaagtttgataatttcagctcc
ttggccattgactgggaatcttccaagattcagttagccagttttgattctgacaaaccc
atgtcctactttgaaaaagaagattccaatggtcaaaggaaactccatggtctaaacaca
gtccatgtgcgtcaagtatcaggaacggcagtcattactactacaactaacaattaccgg
gagtctcatctaagagcagcaaaagtaaagaccccatacagaacattgacccctgtgtct
gccagtctggagctcctgcttgtggaagatgttaaagtgaacccaggatctatttctatt
tacaatcaccctgaagtcacggctgagttcaccatctctgagggatcaggatatttttac
atcaacagcagcatttccaatattgtcaaaacagtatttctagaaacaaaaggaattttg
acagtgtatcccttgcgcccaggaaccttatctatcatggtttacgatctttgtctggct
ttcccagcaccagctgcagtccatgttcatgtatctgatattctgcaggtggaagttaga
gtggtggataaggttgaaattggaaagtctataaaagcctatgtgagggtcttggattct
tctcaaatgccattccttgctaaatattttgcctacatggatttggatcttggatcttca
tcacacattgtatctattaaagccctcagtgagaaggttgatgagtttactgcagtcttt
gaagtccatggtcttgctttaggacagacaagtcttgttgcatctgtcgcagataaaacc
ggtaacagaattgattcttcagcaagatcgcttgaggtattccctccattccgactcctg
cctcggaggattacactccttatcggtgctacaatgcagatcacatcagaaggtggccct
cacccacaatctaacatcatattttctatcgcaaatgaaaaagttgcttctgtgagcacc
aatggtctggtgaggggtgaaacaatcggcaatatatctgtgactggggccatacaggct
gttgatacagaatctggaaaagtggctattgtgtctgaggataaagtagaggttgaagta
atccaactgaaagctgttcgtattcacgcacccatcaccagaatgaaaggtggcacacag
atgcctgtttatgtaatgggaatatctagcaaccagacacctttttcatttggtaatgct
gtacctgggcttgttttctactggtctgtagtaaagcgggatattatagaggtgaagagc
cgacatgatgaggtgtctgttgagcttccaggacagtacaactttgccatgaatgtgtat
gccaaaatgagaggaaaaactggactcaaagtgactgttcgtgtcactgacccactggca
aagcagttctatggccaggcacatgaattctctgatgagattcagattcaggtctttgaa
cgattacatttaataagtccaaatgtggaggctgaacagatattgctagctcccaattct
aaattgaggctgcagaccaatagagaccgagcagcgactgttggctacagagtattgaat
ggtgtaaagaagccgcctgttgtacaggttgatgataatggtctattgacatcgggttct
tttactggtatttccaccatggaagtcaactctcaggagccatttggaattaaccaaact
attattgtctctgttaaggtatctccagtttcatatatgcgcattgtaactagtcctgtg
cttcaaacagaaaccagtcacttattgtctacaattccattgggaataactttgcatttc
tcagcccatttccatgataacactggggaagtttttcacgctcagaattctgttcttaag
tttgcacttaacagagatgattttgtgcaaattggtaagggacccagtaatgacagtttg
gtcatgcgcacagtcaatgttggatacactatattaagtgtgtgggatgctgagaaccca
ggaatctcggactatattcccctgcctgtccagcacagtatataccctagtctaaatgaa
gacgttgtagttggtgatgtaatctgttttacaagcacagttgccagtaaaaaaggtttg
gctggaacatggagttcttcctctatctccactcttcagattgatcccagaacaggtgct
gctttagcaagagattccggatttgtgactgtttattatgaaattcctgggttccttaag
tcttatcgtgagatgttaatacgttctcctctgagaacacatgtggtaaatgcaaatgga
gagaaaatcagtttgcaggctggaaatatacataaattgcttgttgaaattggagaaaat
aacaacaatttgaaaggagaatgttcagcagcccagattgaagccattcaggatcttcat
ccagaaaacatgataaactgccacttaaggtttaaagatcagaatcttgacatttcagcg
tctgaagtcttttctgcaaatactgactttgattttgactcaggtcactacatctgttcc
cttggtagacagaagctttcagagggccagctaaaacaaatcagcatcggggacacatca
cttatagtaacagcatccatcctgggaattaacgtgtaccaggagcagacaagtgcacat
gttccggtctaccctggattttataccaaccagaaggagcttcttttaagcagtcattat
cctaccaccaatgttaagatatttggagtcgctgaattgctgaaaaaccttgaggtgaag
ccagagttatccatcattactgtctatcaaaaagaaaaatataccggggtgcccagcttt
gtaacttatgaagttggtctatctgatatgcaggttttaaaccagggctctctatctacc
tcactaaccatttccagttacatgtctgatcaaaccatcaacataccaattagattgatg
tcggctaccggcccacttaatgtgccttatgccatgggccagggcttcttctatcacttc
ctgaactcttaccagattattttcttcactttgttcacattgttagcaggggctgctatt
gccatactagtgttttcaccaaaagagaggattgaccacccagcctttatatctgcatca
ccaactcggtctttaggcagtagtcttgtatcatcaccaccaccagccttgtcttatcac
aaccaaggatctcctatgaggaacaattcacgatcattgtggagtccagaatattgttcc
aactga
DBGET
integrated database retrieval system
