Rana temporaria (common frog): 120946121
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Entry
120946121 CDS
T07929
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04514
Cell adhesion molecules
rtem04520
Adherens junction
rtem04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120946121 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120946121 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
120946121 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtem01009
]
120946121 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtem04515
]
120946121 (PTPRF)
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
120946121 (PTPRF)
Protein phosphatases and associated proteins [BR:
rtem01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
120946121 (PTPRF)
Cell adhesion molecules [BR:
rtem04515
]
Immunoglobulin superfamily
Type II RPTP family
120946121 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Tc-R-P
PTP-SAK
V-set
DSPc
C2-set_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Fn3_PTPRU
DUF3377
Insulin_TMD
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
120946121
NCBI-ProteinID:
XP_040216825
LinkDB
All DBs
Position
7:206774021..208066768
Genome browser
AA seq
1919 aa
AA seq
DB search
MVPYLRQPLLTLLALLLCCSITLTQADSEPIFIRKPDDQIGMSGGVASFVCQATGDPKPR
ITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRANRDEAIYECTATNSVGEINSNAKLT
VLEEEQLPHGFPVIDMGPQLKVVERTRTATMLCAASGNPDPEITWYKDFLPVDTANSNGR
IKQLRSGGTSIRGGLQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIP
PSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGAEELTKEEEMPVGRNVLELTNIRESANYT
CVAISSLGVIEAVAQITVKALPKPPVSVMVTETTATSVTLTWDSGNPEPLSYYVIQYKPK
LSEGSFQEVDGVATTRYSIGGLSPFSEYEFRIIAVNNIGRGPPSEVVEARTGEQAPSGPP
LNVQARMLSSSTMVVQWDNPEEANGQIRGFRVYYTSDSHLPFSMWQKHNVVDNLLTTIGG
LTTGITYSIRVLAFTSVGDGPPSNMVQVKTQQGVPAQPVNFQAEAESDTRIMLTWQSASQ
ERISSYELQYWEGQDGPKQKINFGPASFHAVEGLKPDTLYSFQLAASSAMGLGVYTSVIQ
ARTAQSTPSAPPQDVECTSLSSTAIRVSWVAPPVSSRNGVLTRYSLAYQAVTGEDTSRHI
VDSIPPDVSSWEIKDLEKWTEYRVWVRAHTDVGAGPESPPVIIRTDEDVPSAPPRKVEVD
SANSTSIRVSWKSPLPTKQNGQIRGYQVTYVRLEGGEPRGNPIIKDVMLAEAQWRPEESA
EYEALITGLSPETTYSITVAAYTTKGDGARSKPKVVTTTGAVPGRPSMVIGTTSQNTALI
QWHPPREPMGEIQGFRLQYKRVDEEKFITMDFGKNDHHYTVTKLHRGATYVFKLSAKNRA
GFGEEYEKEISTPEDVPSGFPQNLAVVGLTTSTTEVSWDPPVLAERNGKITNYTVVYRDI
NSPQDVFNITRDTHITLVNLKPDTTYDIKVRARNNKGLGPLSPSIQSRTMPVDQVFAKNF
RVNAVMKTSVLLSWEVPDSYKSAVPFKILYNNQNVEVDGHSMRKLINNLQPDTEYSFVLM
NRGSSAGGLQHRVSIRTAPDVLQTKPSSASKYMEEGRFTLELPRVKTSAPVRWYYIVVLP
LDTSSGGLSARWQSPEEMELEQILEAINQGSRRQRRHAAKSKPYIAACLNPLPEVFTLGD
NKEYNGFINKPLNADLSYTCFVLAALEDGDTKKYAASPYSDYIVVEVSSSRQQEEPEMLW
VMGPVLAVILIIIIVIAILLFKSKQERKRTNSPSSKEDQMPGLKDSLLANSSDPVEMRRL
NYQTPGSSVPSYQNISSMRDHPPIPITDLADNIERLKANDGLKFSQEYESIDPSQQFTWE
HSNLEVNKPKNRYANVIAYDHSRVILTSVDGVPGSDYINSNYIDGYRKQNAYIATQGPLP
ETFTDFWRLVWEQRASTIVMMTRLEEKSRVKCDQYWPSRGSETYGMIQVTLLDTVELATY
TVRTFALYKNGSSEKREIRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPADAGPMVVHC
SAGVGRTGCFIVIDAMLERVKLEKTVDIYGQVTCMRSQRNYMVQTEDQYVFIHEALLEAV
MCGNTEVPARSLYAHIQKLSQVPVGESVTAMELEFKLLANSKAHTSRFISANLPCNKFKN
RLVNIMPYESSRVCLQPIRGVEGSDYINASSIDGYRQQKGYIATQGPLAETTEDFWRMLW
EHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDAR
DGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGV
FITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atggtgccttaccttcgccagcccctgctcaccctcctggcgctgctcctctgctgctcc
atcaccctgacccaggcggacagtgagcccatctttatccgcaagccggatgaccagata
ggaatgtcgggcggcgtcgcctctttcgtgtgccaggccacgggggaccccaaaccgcgc
atcacctggatgaagaaagggaagaaagtcagctcgcagcgcttcgaggtcattgaattt
gatgacggctcggggtccgtgctccggatacaacctctgcgggcgaacagggacgaggcc
atctacgagtgcaccgccaccaacagcgtgggcgagatcaacagcaatgccaaactgacc
gtgctggaagaggagcagctgccgcacggctttcccgtcatcgacatggggccccagctg
aaggtggtggagaggacccgaacggccaccatgctgtgcgcagccagcgggaaccccgac
cccgaaatcacctggtacaaggatttccttcccgtggacaccgccaacagcaacggcagg
attaagcagctgcgctcaggtggtacatcaatccgaggcggcctccagatcgaaaacagc
gaagagtccgaccaggggaagtacgaatgtgtcgccaccaacagcgccgggacgcgctac
tccgccccagcgaatctctacgtgcgtgtacgccgcgtggccccgcgtttctccatcccc
cccagtaaccacgaagtgatgcccgggggcagtgtgaacctgacctgtgtcgcagtcggt
gccccaatgccttatgtaaagtggatggccggcgcagaagaacttaccaaagaggaagag
atgccagtaggccgcaatgtcttggaattgaccaatattcgggaatctgccaattacacc
tgcgtggcgatctcttcccttggcgtgattgaggcagtggcgcaaattacagtgaaagct
ttgccaaagccaccagtatccgtgatggtaacagagacaacagccaccagtgtcaccttg
acatgggattccggaaacccagaacctttgtcctattacgtcatacagtataagcccaag
ttgtcagaaggctcatttcaggaggtcgatggtgtggccaccacccgttacagtatcgga
ggcctcagccctttctcagaatatgaattccgcatcattgccgtcaacaacatcggccgg
ggccctccaagtgaagtggtggaagcacggacaggagaacaggctccatcgggcccccct
ttgaatgtccaagctcgaatgctcagctccagtaccatggtcgtccagtgggataaccca
gaggaagccaatggtcagatccgtgggttccgggtatattacacatctgactcacatcta
ccattcagcatgtggcaaaagcacaatgtagtggacaatcttctgaccacaattggagga
ctaaccacaggaatcacttatagcatccgggttctggccttcacgtctgttggggacggg
ccaccttcaaatatggtccaagtcaagacccaacagggagttcctgcccagccagtcaat
ttccaggcagaagcagagtccgacacccgaataatgctcacctggcagtccgcctcgcaa
gagcgcatcagctcctacgaactgcagtactgggaggggcaggatggaccaaagcaaaaa
atcaattttggtccggcgtcgttccatgcggtggaggggttgaagccggacaccttgtat
agtttccagcttgcagcttcgtctgcgatggggctgggggtttacacctctgtgatccag
gctcggacggctcagtccacaccgtctgcgccgccgcaggacgtggagtgtaccagtctt
agctccaccgccatccgggtaagttgggtggctccgccggtatctagccgcaacggagtt
ctgacccgctactcgctggcctaccaggccgtgaccggggaggacacgtcccgtcacatt
gtggacagtatcccgccagacgtctccagctgggagatcaaggatctggagaagtggaca
gagtacagggtgtgggtgagagctcacacggacgtgggggccgggcctgagagccccccg
gttataatacggacggatgaggatgtgcccagcgctccacccaggaaggtcgaggtggac
tcggccaattctacatccatccgcgttagctggaagtcacccctccccacgaagcagaac
gggcagatccggggctaccaagtgacctacgtccgccttgagggtggggaacctcgtggc
aaccccatcattaaggacgttatgctggctgaggctcagtggagacctgaggaatctgca
gaatacgaggccctgattactgggctttccccagagaccacctactccatcactgtggcg
gcttataccaccaagggagacggcgccaggagtaagcccaaagttgtgaccactacaggg
gccgtgccaggtaggcccagcatggtgatcggcacaacgtctcagaacacggcactcatt
cagtggcatccacccagagagccgatgggagagatccagggcttccgcctgcagtacaaa
cgggtggacgaggagaaattcatcaccatggactttggaaagaacgatcatcactacacg
gtgaccaaactgcaccggggggccacctacgtcttcaaactgtccgccaagaaccgggcc
ggctttggagaggagtacgagaaggagatctccacgcctgaggatgtgcccagtgggttc
ccccagaacctggcggtcgttgggctcaccacgtctaccactgaggtgtcctgggacccg
ccagtcttggcggaacgcaacggaaagatcacgaactacacagtggtgtaccgagacatc
aacagccctcaggatgtgttcaacatcacccgtgacacacatatcactttggtcaacctc
aagccggacactacctatgacattaaggtcagggcaaggaacaacaagggcctcgggccc
ctcagccccagcattcagtcacgcacaatgcctgtggaccaagtgtttgcaaagaatttc
agggtgaacgcggtgatgaaaacatcggtcttgctcagctgggaagtccccgactcgtac
aaatccgctgtgcctttcaagattctatacaacaaccagaatgtagaggtggacggtcac
tccatgcgcaagctcatcaataacctccagccagacacagagtattcctttgtactcatg
aaccgtggcagcagcgctggcggtctccaacacagagtgtccatccgcacggctcccgac
gtcctgcagaccaagccatcatctgccagcaagtacatggaggaaggacgatttaccctg
gagctgcccagagtaaagaccagcgcccccgtcagatggtattacattgtggtccttccc
ttggacacttccagcggtggtctgagcgctcgctggcagagcccggaggagatggaactg
gagcagattctagaagccattaatcagggctcccgccggcagaggcgtcacgctgcaaag
agtaagccgtacatagcggcttgtctcaaccctctcccagaagttttcactctcggtgac
aacaaagaatataatggattcatcaacaagccgctgaacgccgacttgagctacacctgc
tttgtgctggcagctctagaagacggggacactaagaagtacgcagccagtccatactct
gattacatcgtggtggaggtctcctcatctagacaacaggaggagcccgagatgttgtgg
gtgatgggcccggtcctggcagtcatcctcattatcatcatcgtcattgccatccttctc
ttcaagagtaagcaggagaggaaaaggaccaactctccctccagcaaagaggaccaaatg
cctggactgaaagactctctgctggccaattcctctgacccggtggaaatgagacgactc
aactaccagactccaggttccagtgtccccagttaccagaatatctcaagtatgagggac
catcctcccatcccgatcaccgacctagccgacaacattgagcgcctgaaggccaacgat
gggctcaaattctctcaggaatatgagtccatcgaccccagtcagcagttcacctgggag
cattccaacctggaggtgaacaagccaaagaaccgctatgcaaatgttatagcgtacgac
cactcacgtgtcatcctcacctccgtggatggggttcctggcagcgactacataaattcc
aactatatagatgggtacaggaagcagaacgcttacatcgccactcaaggtccgctgccg
gaaaccttcacggatttctggcgtctggtgtgggagcagagggcctccaccatcgtcatg
atgacccggcttgaggagaaatccagggtgaaatgcgaccagtactggcccagccgcggc
tcggagacgtacggaatgatacaagtcaccctgctggacacggtcgaattggccacgtac
acagtgaggacgttcgccctctacaagaacggctccagtgaaaaacgagaaatcagacag
ttccagttcatggcctggccagaccacggggttcccgagtaccccacgccgatcctggcc
ttccttcgcagagtgaaggcgtgtaatccggcagatgccgggcctatggtggtacactgc
agcgccggtgtgggaagaacagggtgcttcattgtgattgacgccatgctggagcgagtg
aagctggagaagacggtggatatctatggtcaggtgacctgtatgcgctctcagcggaac
tacatggtacagacggaggaccaatacgtcttcatccacgaggccctgctagaggcggtc
atgtgtgggaacacagaagtaccggcacgcagcctgtatgcacatatccagaaactgtct
caggtccctgtgggagagagcgtcaccgccatggagctagagttcaagctattggccaac
tccaaagcccacacctcacggttcatcagtgccaacctaccatgcaacaagttcaagaac
cggctggtgaacatcatgccctatgaatcgagccgtgtgtgtcttcagccaatccgtggt
gtcgagggctctgactacatcaatgccagctccatcgatggctataggcagcagaaaggc
tacatcgccactcagggacccctggcggagaccactgaggacttctggcgcatgctatgg
gagcataattccaccattgtggtgatgctgaccaagctgcgggaaatgggccgggaaaag
tgccatcagtactggccggccgagcgctccgcgaggtatcagtatttcgtggtggaccca
atggccgaatataacatgcctcagtatatcctgcgtgaattcaaagtgacggacgcacgg
gacggacagtctcggacaatcagacagttccagttcacagactggcccgagcagggagtg
ccaaaaacgggagagggcttcatcgactttatcggacaagtgcacaaaacgaaagaacag
ttcggacaagacggacccatcactgttcactgcagtgctggcgtgggccggaccggagtc
ttcatcacattgagcatcgtgctggagcggatgaggtacgagggggtggtggacatgttc
cagaccgtgaagacgctgagaacacagagaccagccatggtacagacagaggaccagtat
cagctgtgctaccgggctgcactggagtacctgggcagcttcgaccactatgcaacataa
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integrated database retrieval system
