Rana temporaria (common frog): 120946926
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Entry
120946926 CDS
T07929
Symbol
PHC1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120946926 (PHC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120946926 (PHC1)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
120946926 (PHC1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
120946926
NCBI-ProteinID:
XP_040217685
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All DBs
Position
8:complement(50684460..50754044)
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AA seq
862 aa
AA seq
DB search
METESEQNSTSTNGGTAPGASSRPQISQMSLYERQAVQALQALHRQPNAAQYFHQLMLQQ
QLSNAQLHSLAAVQQATIAATRQAASPNTGSNQQTSTTQGSQATLSTSSSAQLLSRAQNV
TAPSATTLTQSVLLSNAGSPPLSQSQTQMYLRQPQLGNLLQVNRSLGRGVPLNSQLILMP
NGSVATVQQEVTQPQNQGMHDSDQVQNLAVRSQQTAQPTSTVAGSTIAHAAPHTTKPATH
LAPSSSAPQQLPSSPVPQTMKSPLCQTGGTVSQGSQTEAEGRKTEGEGVQQNVGINLTRA
ATPAPNQTLISSSMYTHIQPHSVLQQKQVVFQQQIAIHQHRQSQLVHASAHLQLAQQQPQ
AASQQNLQTPPAQQTLVVQPMLQTPDATLPTKAPVPIQPKQPGKGVPPLNLQGHLAAKPT
QGARPLPTPPPNQPHIPVQLVGARQQGPPQALALGAPQVPSQGSTLTQMTLPPSPAPVPT
SVSGTVQEAQAAFYGVLQGKMSAAGKRKAESEEDREESPTLPVKASPPADTPPTVEESST
PADKPEAASQVTPALSVSAPPCAPTLSITSRQHSDSKPPQAIVKPQILTHIIEGFVIQEG
AEPFPVGSPQIPKDPEKVPATGPALLSAESPPPQPTLDQAISDSCSSKLLKCEYCGKLAP
SDQFRGSKRFCSMACAKSSFPSRYNVSCSHQLRLKRKALKDLQEMGGVRVRRRGPRRNSS
EIARAKIQGKRMRVTEEDSSRGSDNSSYDEAFSPTSPAPPSCRTPHAERDGSTPTSGPSS
SELLGINPVFLSSNPSRWSVEEVYEFISSLQGCQDLAEDFRSQEIDGQALLLLKEEHLMS
ALNIKLGPALKICAKINLLKET
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggagacagagagtgaacagaattccacctccaccaatgggggcactgcccctggtgcc
agctcccgcccacagatttctcagatgtccctgtatgagcgccaggctgtgcaggctctc
caggctttacacagacaaccaaatgcagcccagtatttccaccagttgatgttgcaacag
cagctaagtaatgcacagctgcatagtcttgcggccgttcagcaggctaccattgcagcc
actcgccaggctgcttctcctaacactggttccaatcagcagaccagcaccacgcaagga
tcacaggcaactttatcaaccagctcatcggcccagctcctgagtcgtgctcagaatgtc
actgcccccagtgcaacaacacttacccagtcagttctgctcagcaatgccggctcccca
cccctcagccagtcccagacacaaatgtacctacggcagcctcagctgggaaacctttta
caagtaaatcgttctcttggccgtggagtccctctgaactctcagctgattctaatgccc
aatggctcagtggctactgtacaacaggaagtgacacagccccaaaaccaaggcatgcat
gactcagaccaggttcagaacttggctgtccgaagtcagcaaaccgctcagcccacctcc
actgttgcgggatctaccattgctcatgctgctccgcatacaaccaaaccagctactcat
ctagcaccctcttcctcagcaccccaacaactgccttcctcccctgtaccacagactatg
aagagtcctttgtgtcaaacagggggcactgtgagccaaggaagtcagacagaggcagag
ggtagaaaaacagaaggggaaggggtacagcagaacgttggtatcaacttgaccagagcc
gcaactccagcacccaatcagacactgatcagctcttctatgtacactcacattcagcct
cactcggtcctacagcaaaaacaggtggtattccagcaacaaattgccatccaccagcac
cgccagtcccagcttgtccatgcctctgctcaccttcagctggcacagcaacagccccag
gcggcctcacagcaaaatctacagacgcctcctgcacaacagacccttgtcgtacagcca
atgttacagacacctgatgcaactctgccgaccaaagcccctgtgcccattcagcccaag
caaccaggcaaaggagttccccctctaaatcttcaagggcacctagcagccaaaccaact
cagggtgccagaccactccccacgccccctcctaatcagcctcacattccagtacaactg
gttggtgccagacagcagggtccccctcaagcactagccttaggagcccctcaagttcca
tcacaggggtcgacgttaactcagatgacattacctccttctccagctcctgtcccaact
tctgtgtctggtaccgtacaggaagcccaagctgccttctatggagttctgcagggcaag
atgtctgcagctggaaagagaaaagcagagtcagaggaggacagggaagagtctccaacc
ctcccagtgaaagcgtctcccccagcagatacgccacctacagttgaagaaagcagcacc
ccagctgataagcccgaagctgcctctcaagtcacccctgctctgtctgtgtctgcaccc
ccttgtgcgcccaccctttcgatcacgtcgcgtcagcacagtgactccaagcccccacaa
gccattgtgaagccacagatcctgactcatatcatagagggctttgtcatccaagaggga
gcggaaccctttcctgtgggtagtcctcaaataccaaaggaccctgagaaggtgcctgcg
actggtccagctttgctttcagcggagagtcctccccctcagcccacactagaccaagct
attagtgattcttgtagctctaaactattaaagtgtgaatactgtggcaagcttgctccg
tcagatcagttccggggctcaaagaggttctgttcaatggcctgtgccaagagctccttt
ccttccagatacaatgtaagttgcagtcaccagttgcgtcttaaaaggaaggcattgaag
gatcttcaggaaatgggaggagtgagagtgcgcagacgcggcccacgaagaaacagttct
gagattgcacgtgccaagatccaggggaagcgaatgcgggtaacagaggaggattcgagc
cgcggttctgacaattccagctacgatgaagctttctctcccacctctccagcccctccc
tcctgtaggacaccccatgcagagagagatgggagtaccccaacaagtggaccctccagc
tcagaactcctggggatcaatccagtgtttctgtccagcaatcccagtcgttggagtgtg
gaggaggtgtatgagttcatttcctccttacaaggatgccaggatctagctgaagacttt
cggtcccaagagatcgatgggcaggctttgttactgcttaaggaagaacaccttatgagt
gccctgaatattaaactgggacctgctttaaaaatctgcgccaaaatcaacctgttaaag
gaaacttaa
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