Ruoffia tabacinasalis: VQP54_00855
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Entry
VQP54_00855 CDS
T10899
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VQP54_00855 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtf03400
]
VQP54_00855 (nth)
Enzymes [BR:
rtf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
VQP54_00855 (nth)
DNA repair and recombination proteins [BR:
rtf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VQP54_00855 (nth)
Prokaryotic type
VQP54_00855 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
HHH_5
EAD1
SecA_PP_bind
Motif
Other DBs
NCBI-ProteinID:
WWL40508
LinkDB
All DBs
Position
173751..174365
Genome browser
AA seq
204 aa
AA seq
DB search
MTLNSEEVLDIIHRMDRLIPDAKSELDYDDPFHMLVAVMLSAQSTDKQVNKIAPALFEAF
PDPESMSQVTAQEVEPYIKTLGLYRNKAKYLVSAAKDIVDKFDGKIPDNRKDLMSLSGVG
RKTANVVLSVVFDTPAIAVDTHVERVCKRLNIVPEDATPVQVEKILMEKLPVKYWSHAHQ
LLVLFGRYYCTARSKKCYEYLEGV
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgacattaaattcagaagaagtacttgatattatccaccgtatggatcgattaattcca
gatgcaaaatctgaattagattatgatgatcccttccacatgctagttgctgtaatgtta
agtgcacagtcaacagataaacaagtgaataagatagcacctgccttatttgaagctttt
ccagatccagaatcaatgagtcaagtcacagctcaggaagttgaaccctacattaagaca
cttggactttaccgtaataaagcgaagtatttagtaagtgctgctaaagatattgttgat
aaatttgatgggaagatccctgataaccgtaaagatttgatgtcactttctggagtagga
cgaaaaactgcaaatgttgtactttcagttgtttttgatacaccagcgattgcagtagat
actcatgttgaaagagtatgcaagagattaaatatcgttcctgaagatgctacacccgta
caagtagagaagatattaatggaaaaattacctgtaaaatattggagccatgcacatcag
ttgttagttctattcggaagatattactgtactgctagaagtaagaaatgctatgaatat
ttagaaggcgtataa
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