Raoultella terrigena: NCTC13098_00333
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Entry
NCTC13098_00333 CDS
T06046
Symbol
arnA
Name
(GenBank) Polymyxin resistance protein PmrI
KO
K10011
UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:
2.1.2.13
1.1.1.305
]
Organism
rtg
Raoultella terrigena
Pathway
rtg00541
Biosynthesis of various nucleotide sugars
rtg01100
Metabolic pathways
rtg01250
Biosynthesis of nucleotide sugars
rtg01503
Cationic antimicrobial peptide (CAMP) resistance
Module
rtg_M00761
Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NCTC13098_00333 (arnA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
NCTC13098_00333 (arnA)
Enzymes [BR:
rtg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.305 UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating)
NCTC13098_00333 (arnA)
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.13 UDP-4-amino-4-deoxy-L-arabinose formyltransferase
NCTC13098_00333 (arnA)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
Formyl_trans_N
GDP_Man_Dehyd
Formyl_trans_C
3Beta_HSD
Sacchrp_dh_NADP
NAD_binding_10
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
VDR24056
UniProt:
A0A3P8LZP1
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All DBs
Position
1:288079..290064
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AA seq
661 aa
AA seq
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MKAVVFAYHDMGCAGIQSLLDAGYDIAAIFTHPDNPGENHFFGSVARLAAEQGIPVWAPE
DVNHPLWIERIRDMKPDVLFSFYYRNLLGDEILNLAPQGAFNLHGSLLPKYRGRAPLNWV
LVNGESETGVTLHRMIGRADAGDIVAQQSVAIGADDVALTLHRRLCAAASELLGQALPAI
REGNIAARAQDESLATYVGRRTPEDGRLDWEQPVQTLHNLVRAVSDPWPGAFGYTGANKF
IVWKSRVRHDLPAAKPGTVISTAPLVVACRDGALEIVTGQTDRGVYIQGTQLAQALGLVS
GAVLSSKPVVAIKRRTRVLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLENP
RFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDC
VKYDKRIIFPSTSEVYGMCTDKNFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDK
AALRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQKRCFTDI
SDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLDCFERHPLRGNFPPFAGF
RDVESSDYYGKGYQDVEHRKPSIRNAKRCLSWTPTVPMEETVEHTLDFFLRTVELADDKT
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccgtagtcttcgcttatcacgatatgggttgcgcaggtattcagtccctgctg
gacgccgggtatgacatcgccgctattttcacccatccggataaccccggcgaaaaccat
ttctttggttcggtggcgcgtctcgctgcggaacagggtatcccggtatgggcgccagaa
gatgtgaatcacccgctgtggattgaacgtatccgcgacatgaagccggacgtcctgttc
tccttctactaccgcaatctgctgggcgatgagatcctcaatcttgcgccgcagggcgcc
tttaacctgcacggctccctgctgccgaagtatcgcggccgcgcgccgctgaactgggtg
ctggtcaacggagagagcgaaacgggcgtcaccctgcaccgcatgatcggccgcgccgat
gccggcgatattgtcgcccagcagtcggtggccattggggccgatgacgtggcgctgacc
ctgcaccgcaggctgtgcgcggcggcgtccgagctgctgggccaggcgctgccggcgatc
cgtgaaggcaacattgccgcgcgcgcgcaggatgagagcctggcgacctacgtcggccgc
cgcacgccggaagatggccgtcttgactgggagcagcccgtgcagaccctgcataatctg
gtccgcgccgtctccgatccgtggccgggcgcgttcggctataccggcgccaacaaattt
atcgtctggaaatcccgcgtccgtcacgatctgccggcagcgaagccggggacggtgatt
tccaccgcgccgctggtggtcgcctgccgggacggagcgctggaaatcgtcaccggtcag
accgatcgcggcgtctatattcagggcacgcagctggcgcaggccctgggcctggtctcc
ggcgcggtgctgagcagcaagccggtcgtggcgattaagcgccgcacccgcgtgctgatc
ctcggcgttaacgggtttatcggcaaccatctgaccgagcgcctgctgcaggacgataat
tacgaaatctacggcctggatatcggttctgatgccattagccgcttcctcgaaaatccg
cgcttccacttcgtcgaaggggatatcagcattcactccgaatggattgagtatcacatt
aagaaatgcgacgtggttctgccgctggtggcgatcgccacgcctatcgaatacacccgt
aacccgctgcgcgtgttcgagctggacttcgaagagaacctgaagattatccgcgactgc
gtgaagtacgataagcgcattatcttcccgtcgacctctgaagtgtacggcatgtgcacc
gataaaaacttcgatgaagacagctcgaacctggtggtggggccgatcaacaagcagcgc
tggatctattccgtgtccaagcagctgctcgaccgcgttatctgggcctacggcgacaaa
gccgcgctgcgcttcacgctgttccgtccgtttaactggatggggccgcgtctggataac
ctcaacgccgcgcgtatcggcagctcccgcgccattacccagctgatcctcaacctggtt
gaaggctcgccgattaagcttatcgaaggcggcaagcagaagcgctgcttcaccgatatc
agcgacggtattgaagcgctgttccgcattatcgagaacaaagacggccgctgcgacggg
cagattatcaacatcggtaacccggacaacgaagccagtattaaagagctggcggagatg
ctgctggactgcttcgagcgccatccgctgcgcggcaacttcccgccgttcgccggcttc
cgcgatgttgaaagcagcgactactacggaaaaggttatcaggacgtcgagcaccgcaag
ccgagcatccgcaacgcgaagcgctgcctgagctggacgccgacggtaccgatggaagag
accgtcgagcataccctcgacttcttcctgcgcaccgttgagctggcggatgataagaca
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